1. Browse the Database
  2. View Redoxidase
Entry information : LsePrx02
Entry ID 3494
Creation 2006-08-15 (Christophe Dunand)
Last sequence changes 2006-08-15 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-06-16 (Christophe Dunand)
Peroxidase information: LsePrx02
Name LsePrx02
Class Class III peroxidase     [Orthogroup: Prx013]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca serriola    [TaxId: 75943 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsePrx02
start..stop		 S start..stop
LsaPrx02 516 0 2..255 25..278
LperPrx02 446 4.25e-161 18..254 46..283
LvPrx02 392 1.03e-139 13..254 20..258
HaPrx34 382 6.27e-135 18..230 33..242
Literature and cross-references LsePrx02
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project
EST ref. GenBank:   BQ989916 [5' end]
Protein sequence: LsePrx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   255
PWM (Da):   %s   27006.98  
PI (pH):   %s   8.88
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
SGGNGHGRGH GNGNGGGLKM NFYGKLCRLD RLVTVESTVR QIVWSKVSAD PSMAAKLLRL HYHDCFVRGC DASILLDPTQ NKTTEKTAGP NRSISGYEVI DEIKTKLEAK CPGIVSCADI  VALAARDAVS FQFRKEMWPV FTGRKDGTVS LASEVGGNLP SAGANFTTLL TQFGTKGLNL NDLVALSGAH TIxISRCTLV ARRLYNFTGV xDADPSLDVS YAQTLRGLCP TLRTQPQLFE 
WIPxALSPLI LITIG 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. PS and 3'end is missing.