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Entry information : HaENODL23HanXRQChr16g0523401
Entry ID 14542
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaENODL23HanXRQChr16g0523401
Name HaENODL23HanXRQChr16g0523401
Class Early nodulin    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaENODL23
start..stop		 S start..stop
HaENODL18 131 2.47e-38 19..156 21..158
AtENODL01 129 1.49e-37 9..172 14..179
ThasENODL02 119 1.24e-33 7..172 15..184
AtUCC01 61 0.0000000000245 7..156 8..145
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 149689781..149689964 182 N° 2 149690339..149690781 441  
join(149689781..149689964,149690339..149690781)


exon

Literature and cross-references HaENODL23HanXRQChr16g0523401
DNA ref. HanXRQ genome:   HanXRQChr16 (149689781..149690781)
Protein sequence: HaENODL23HanXRQChr16g0523401
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   208 (187)
PWM (Da):   %s   21973.45 (19895.3) Transmb domain:   %s   i279-301o362-384i417-439o459-481i657-674o
PI (pH):   %s   3.93 (3.82) Peptide Signal:   %s   cut: 22 range:22-208
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAPATAIHLTLLALFLTGATAYTNHTVGDKAGWLFDPNTNTSSAN
YASWSANQTFELGDYLIFNTNTNQTVILTYNETTYRSCSTDNSSDSDTFSYSSGNQQFGQPLTVAVPLTIEGANYFFSDASDGVQCQNGMAFGINVTHGVGLPPSLNQPPPPPYVEPPANGDGSLTPPVSDQPSGA
GLSDGVNVRRVVCYVLTFCGIFCLFLV

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTCCGGCGACGGCGATACATTTAACACTACTTGCACTTTTCCTCACCGGCGCCACCGCATACACCAACCACACCGTCGGAGACAAAGCCGGCTGGCTTTTCGATCCAAACACCAAC
ACATCCTCCGCTAATTACGCCTCCTGGAGCGCTAATCAAACCTTCGAACTCGGCGACTACTTAAAAGTAAGTACGACTTTCAATCGGTCAAAATCGATTCGATTTGTGTTCAATAGATTT
CATTTGATGATCTGATTCGATTTCGATTAGGATTGCGATTTTGATTATTGTGAAGTTTTTTGGAGAAATACATTGATCTAAACTTGATTTAGGTTTTGATTTTGATATTGATTTGATGAA
TAATGTGTAGTATGCAACACGAACACGAATCAGACGGTTATTTTGACTTAAGCTTGAGTTTGAATTGGTCAAAATCGATTCGATCTGTTTGCAATATATTTCAATTCATGATCTGATCTG
ATTTGATTCCGATTCAGATCGTATAGATTTTGATTTTGATTTCGAATTTGAATTTGATTTTAATTTTGATTAACATGTAGTATTCAACACGAACACGAATCAGACGGTTATTTTAACCTA
CAACGAAACGACGTACCGTAGCTGCAGCACCGATAACTCATCAGATAGTGATACATTCAGTTACAGCTCAGGGAACCAGCAGTTCGGGCAGCCGTTGACCGTTGCGGTTCCGTTGACTAT
CGAAGGAGCAAACTACTTCTTCTCCGATGCTAGTGACGGTGTTCAGTGCCAGAACGGGATGGCGTTCGGGATCAACGTCACTCATGGCGTCGGACTTCCGCCGAGTCTTAATCAACCTCC
GCCGCCGCCGTATGTTGAGCCTCCGGCGAACGGTGATGGAAGCCTTACGCCGCCGGTGAGTGATCAGCCAAGTGGCGCTGGATTAAGTGATGGTGTTAATGTGCGCCGGGTGGTATGTTA
CGTGCTCACATTTTGTGGAATATTTTGTTTGTTTTTAGTGTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTCCGGCGACGGCGATACATTTAACACTACTTGCACTTTTCCTCACCGGCGCCACCGCATACACCAACCACACCGTCGGAGACAAAGCCGGCTGGCTTTTCGATCCAAACACCAAC
ACATCCTCCGCTAATTACGCCTCCTGGAGCGCTAATCAAACCTTCGAACTCGGCGACTACTTAATATTCAACACGAACACGAATCAGACGGTTATTTTAACCTACAACGAAACGACGTAC
CGTAGCTGCAGCACCGATAACTCATCAGATAGTGATACATTCAGTTACAGCTCAGGGAACCAGCAGTTCGGGCAGCCGTTGACCGTTGCGGTTCCGTTGACTATCGAAGGAGCAAACTAC
TTCTTCTCCGATGCTAGTGACGGTGTTCAGTGCCAGAACGGGATGGCGTTCGGGATCAACGTCACTCATGGCGTCGGACTTCCGCCGAGTCTTAATCAACCTCCGCCGCCGCCGTATGTT
GAGCCTCCGGCGAACGGTGATGGAAGCCTTACGCCGCCGGTGAGTGATCAGCCAAGTGGCGCTGGATTAAGTGATGGTGTTAATGTGCGCCGGGTGGTATGTTACGTGCTCACATTTTGT
GGAATATTTTGTTTGTTTTTAGTGTGA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
TTTTCAAACT CTTTCGAAAT TAGAAATCAG ATCGCTACTT CCAATCACCG ACCACAGGTA ACCTCCACTC TTCCAGCCGG ATCCAATGGC TCCGGCGACG GCGATACATT TAACACTACT  TGCACTTTTC CTCACCGGCG CCACCGCATA CACCAACCAC ACCGTCGGAG ACAAAGCCGG CTGGCTTTTC GATCCAAACA CCAACACATC CTCCGCTAAT TACGCCTCCT GGAGCGCTAA  TCAAACCTTC GAACTCGGCG ACTACTTAAT ATTCAACACG AACACGAATC AGACGGTTAT TTTAACCTAC AACGAAACGA CGTACCGTAG CTGCAGCACC GATAACTCAT CAGATAGTGA  TACATTCAGT TACAGCTCAG GGAACCAGCA GTTCGGGCAG CCGTTGACCG TTGCGGTTCC GTTGACTATC GAAGGAGCAA ACTACTTCTT CTCCGATGCT AGTGACGGTG TTCAGTGCCA  GAACGGGATG GCGTTCGGGA TCAACGTCAC TCATGGCGTC GGACTTCCGC CGAGTCTTAA TCAACCTCCG CCGCCGCCGT ATGTTGAGCC TCCGGCGAAC GGTGATGGAA GCCTTACGCC  GCCGGTGAGT GATCAGCCAA GTGGCGCTGG ATTAAGTGAT GGTGTTAATG TGCGCCGGGT GGTATGTTAC GTGCTCACAT TTTGTGGAAT ATTTTGTTTG TTTTTAGTGT GAAAGAGGTA  GTTGGTGTAT TTTCGTGGGG TCGAGTTCAG TGTTGAAAAA TGTTTTTTTT GAGGTGATAG AATTACAGAA AAACTCCATT GATGGGGTTA GGTTATAATT ATTTAAACTT TTGTGGTTAG 
ATTTATATTT ATAAATATCT TAATCTTTAT TTTACTTTAA AAAATGTGGT AAAATTTAAT TTATAATGAA TGATGGTTAT GGTTGTTCAC TAGCCGAGCT TAG 

Retrieve as FASTA