View Redoxidase 14560

Entry information : HaPNC02HanXRQChr04g0122601

Entry ID	14560
Creation	2017-11-07 (Christophe Dunand)
Last sequence changes	2017-11-07 (Christophe Dunand)
Sequence status	N/D
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaPNC02HanXRQChr04g0122601

Name

HaPNC02HanXRQChr04g0122601

Class

Plantacyanin [Orthogroup: PNC002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaPNC02 start..stop	S start..stop
HaPNC03	172	1.27e-57	43..130	1..88
HaPNC06	152	4.16e-49	1..124	1..120
HaPNC17	124	4.63e-38	1..124	1..118
HaPNC16	116	5.44e-35	1..120	1..115

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14560' 'complement(join(162407076..162407272,162407788..162407983))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	162407788..162407983	194	N° 2	162407076..162407272	195
complement(join(162407076..162407272,162407788..162407983))

Literature and cross-references HaPNC02HanXRQChr04g0122601

DNA ref.	HanXRQ genome: HanXRQChr04 (162407983..162407076)

Protein sequence: HaPNC02HanXRQChr04g0122601

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	130 (104)
PWM (Da):	14516.04 (11770.6)
PI (pH):	8.72 (8.47)	Peptide Signal:	cut: 27 range:27-130

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAKGRGDAMVVIMVICLLVMALQCKAYEVLRDHIVGGKSGWNMNY
KDENWVGQPGDRTFGAGERYVFKYRKGEHNVVVVNKEGFDNCKTTPTDKVYTSGNDSITLQHGDNYFICSMKGHCPTMRTSRHVP

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTAAGGGAAGAGGTGATGCAATGGTGGTAATAATGGTGATATGTCTACTAGTGATGGCGCTGCAATGCAAGGCATATGAAGTGTTAAGAGATCATATCGTTGGTGGTAAAAGTGGT
TGGAATATGAACTATAAAGACGAAAATTGGGTCGGTCAACCCGGTGACCGCACCTTCGGGGCTGGCGAAAGATATGGTATCCTCTCAACATATCACTGCTTTGTTTGCTAACATTATATA
AATTTAATTTGTAAATTACTCAACAAAATATTTATTTCAGTAAACTACAATTTGAGACCATGTGGTTAATACCCAATGGCACGTAGAGTCACTGTTTGGCAAAATTAAACAATCAAGTCC
ATATGGTTGTCAATTTAAATCCCTGCTAACCGAATTGGTTGGTTAACCGTTAATTGATCAGTGAAATGACTAATAAACCCTCATATTATTATATATAAACTTAAAATAAATAAAAAATCT
TTAGTTGACCCGTGAAATAACTAGAACCTGATCCATACTCCATTTCGGTTGAACCAAGATCAAACCTTCAAACATCAAACTTGTATGAAGAACATCATACCCAGAAAAAAAACCCATACC
TACCACCAACCGTACCACTCGATACCACTGATAGATCTGAACTACCCAGTACCACAACATCATGTTTTCATTTAGTTGTTTAATTGATTAGTTATTTTATGATGTGAACAGTTTTTTTAA
ATACCGAAAAGGAGAGCATAATGTTGTGGTAGTGAACAAGGAAGGGTTTGATAATTGCAAGACTACTCCGACCGACAAGGTTTACACAAGTGGAAATGACTCAATTACCCTCCAGCATGG
AGATAACTACTTCATTTGCAGTATGAAGGGTCATTGTCCTACGATGAGGACCTCAAGGCATGTACCATGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

GAACTTTCAA AATCTATGAG TGATTTTTTG GATATAAATT GGTTTCATAT CCACACAAAC AACTCACAAA TGAAACGACA ATAATCATCA AATTAGAAAT CACCATCTCT TCTTGCTTGA CTAAATAAAT CATGGCTAAG GGAAGAGGTG ATGCAATGGT GGTAATAATG GTGATATGTC TACTAGTGAT GGCGCTGCAA TGCAAGGCAT ATGAAGTGTT AAGAGATCAT ATCGTTGGTG GTAAAAGTGG TTGGAATATG AACTATAAAG ACGAAAATTG GGTCGGTCAA CCCGGTGACC GCACCTTCGG GGCTGGCGAA AGATATGTTT TTAAATACCG AAAAGGAGAG CATAATGTTG TGGTAGTGAA CAAGGAAGGG TTTGATAATT GCAAGACTAC TCCGACCGAC AAGGTTTACA CAAGTGGAAA TGACTCAATT ACCCTCCAGC ATGGAGATAA CTACTTCATT TGCAGTATGA AGGGTCATTG TCCTACGATG AGGACCTCAA GGCATGTACC ATGAAGATTC AAACATTTTC ATCCTGAATT CAAAGTAACA ATAATAATAA TATTATAAAT ACTAATGATA ATGAATAATC AATAAAATCT ATGTATTTAT GCGTGTACTA AGAGTACCAT ATATTTTAAA TATTGTCATA TGGATTATGG TATAGACAAA TTTCGCTTAT TATAATATTT GGCCTTAAAT TAAGCAATTT
TAAAGT

Retrieve as FASTA