View Redoxidase 14598

Entry information : HaSTC23HanXRQChr13g0398831

Entry ID	14598
Creation	2017-11-07 (Christophe Dunand)
Last sequence changes	2017-11-07 (Christophe Dunand)
Sequence status	N/D
Reviewer	Not yet reviewed
Last annotation changes	2017-11-23 (Catherine Mathe (Scipio))

Peroxidase information: HaSTC23HanXRQChr13g0398831

Name

HaSTC23HanXRQChr13g0398831

Class

Stellacyanin [Orthogroup: STC001]

Taxonomy

Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus

Organism

Helianthus annuus (Sunflower) [TaxId: 4232 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	HaSTC23 start..stop	S start..stop
HaSTC24	157	1.01e-50	1..125	1..125
HaSTC08	150	2.46e-47	1..140	1..140
HaSTC09	145	1.15e-45	13..149	11..153
HaSTC07	145	1.38e-45	1..140	1..140

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14598' 'complement(join(80652081..80652385,80652476..80652647))'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	80652476..80652647	170	N° 2	80652081..80652385	303
complement(join(80652081..80652385,80652476..80652647))

Literature and cross-references HaSTC23HanXRQChr13g0398831

DNA ref.	HanXRQ genome: HanXRQChr13 (80652647..80652081)

Protein sequence: HaSTC23HanXRQChr13g0398831

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	158 (133)
PWM (Da):	16976.61 (14438.2)	Transmb domain:	i7-29o139-157i
PI (pH):	8.44 (8.44)	Peptide Signal:	cut: 26 range:26-158

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MATFSHMVVALAISVAVLLPTTTIATEYVVGGDSGWTTNFDYQNW
AKDKQFYVGDKLVFKYQQGKHDVYKVNASDFASCTVPDPSSGLKSGSDVVTLMAPGKKWYICGVGRHCADLNQKLVINVQGWAPAPAPNSATKYGYQTFMAIVVVVLSIIAIY

Retrieve as FASTA

Remarks

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTACTTTTAGCCACATGGTTGTAGCTCTCGCCATTTCGGTTGCGGTGTTACTTCCGACGACCACCATAGCAACCGAATATGTTGTCGGGGGTGACAGCGGTTGGACGACCAATTTT
GATTATCAAAATTGGGCCAAAGATAAACAATTCTACGTCGGTGATAAACTAGGTGACTTGTTTAAACTTTTTGAACTTTTTCATATAAAAAAATAAAAGTTCATATATTGTAACACTAAC
TTTGTCAATTTGTTGATTAAAGTGTGTTCAAGTACCAACAAGGCAAGCACGACGTATACAAAGTGAATGCTAGTGACTTTGCAAGTTGTACTGTCCCAGATCCTAGCTCAGGCCTAAAAT
CTGGGAGTGACGTCGTGACCTTGATGGCCCCCGGCAAAAAGTGGTACATTTGTGGCGTGGGACGACATTGTGCTGATCTCAACCAAAAGTTGGTCATAAATGTACAAGGATGGGCACCCG
CACCCGCCCCAAATAGCGCTACCAAGTATGGATATCAGACTTTCATGGCGATCGTTGTCGTTGTTTTATCGATAATTGCCATATACTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTACTTTTAGCCACATGGTTGTAGCTCTCGCCATTTCGGTTGCGGTGTTACTTCCGACGACCACCATAGCAACCGAATATGTTGTCGGGGGTGACAGCGGTTGGACGACCAATTTT
GATTATCAAAATTGGGCCAAAGATAAACAATTCTACGTCGGTGATAAACTAGTGTTCAAGTACCAACAAGGCAAGCACGACGTATACAAAGTGAATGCTAGTGACTTTGCAAGTTGTACT
GTCCCAGATCCTAGCTCAGGCCTAAAATCTGGGAGTGACGTCGTGACCTTGATGGCCCCCGGCAAAAAGTGGTACATTTGTGGCGTGGGACGACATTGTGCTGATCTCAACCAAAAGTTG
GTCATAAATGTACAAGGATGGGCACCCGCACCCGCCCCAAATAGCGCTACCAAGTATGGATATCAGACTTTCATGGCGATCGTTGTCGTTGTTTTATCGATAATTGCCATATACTAA

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTACTT TTAGCCACAT GGTTGTAGCT CTCGCCATTT CGGTTGCGGT GTTACTTCCG ACGACCACCA TAGCAACCGA ATATGTTGTC GGGGGTGACA GCGGTTGGAC GACCAATTTT GATTATCAAA ATTGGGCCAA AGATAAACAA TTCTACGTCG GTGATAAACT AGTGTTCAAG TACCAACAAG GCAAGCACGA CGTATACAAA GTGAATGCTA GTGACTTTGC AAGTTGTACT GTCCCAGATC CTAGCTCAGG CCTAAAATCT GGGAGTGACG TCGTGACCTT GATGGCCCCC GGCAAAAAGT GGTACATTTG TGGCGTGGGA CGACATTGTG CTGATCTCAA CCAAAAGTTG
GTCATAAATG TACAAGGATG GGCACCCGCA CCCGCCCCAA ATAGCGCTAC CAAGTATGGA TATCAGACTT TCATGGCGAT CGTTGTCGTT GTTTTATCGA TAATTGCCAT ATACTAA

Retrieve as FASTA