1. Browse the Database
  2. View Redoxidase
Entry information : HaSTC30HanXRQChr17g0547691
Entry ID 14605
Creation 2017-11-07 (Christophe Dunand)
Last sequence changes 2017-11-07 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaSTC30HanXRQChr17g0547691
Name HaSTC30HanXRQChr17g0547691
Class Stellacyanin    [Orthogroup: STC003]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaSTC30
start..stop		 S start..stop
HaCRX04 136 2.53e-43 23..100 1..78
HaCRX02 136 2.53e-43 23..100 1..78
HaCRX03 96 3.04e-27 23..100 1..85
HaSTC22 89 4.15e-24 22..89 5..72
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '14605' 'complement(join(52475483..52475550,52475640..52475874))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 52475640..52475874 233 N° 2 52475483..52475550 66  
complement(join(52475483..52475550,52475640..52475874))


exon

Literature and cross-references HaSTC30HanXRQChr17g0547691
DNA ref. HanXRQ genome:   HanXRQChr17 (52475874..52475483)
Protein sequence: HaSTC30HanXRQChr17g0547691
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   100
PWM (Da):   %s   11418.67  
PI (pH):   %s   8.03
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MLPFFINWKSKMYPRMQQEEIKMANKNLCLFILIATIVTQATWVRAVEYNAGDCKAWNEGVDLQAWADGKQFYKGDSIVFNYECGKHNVALLQDKASLDN

Retrieve as FASTA  
Remarks
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTTCCTTTCTTTATAAATTGGAAGTCCAAGATGTATCCTAGAATGCAACAAGAAGAAATTAAAATGGCTAACAAAAATTTGTGTCTTTTCATCCTCATAGCAACAATAGTGACTCAA
GCTACATGGGTTCGAGCTGTGGAATATAATGCTGGTGACTGTAAAGCTTGGAACGAGGGTGTTGATCTCCAAGCTTGGGCCGACGGGAAGCAATTCTATAAGGGAGACAGTATTGGTACA
TTCTTATACATAATTAATCATACATGATTTGATTTGTTATAAGTGTTCGTCTAACTAATTAAATTATCTATATTGCTGATGCAGTTTTTTCAATTACGAATGCGGAAAACACAATGTAGC
GCTACTACAAGATAAAGCCTCGTTGGATAACTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTTCCTTTCTTTATAAATTGGAAGTCCAAGATGTATCCTAGAATGCAACAAGAAGAAATTAAAATGGCTAACAAAAATTTGTGTCTTTTCATCCTCATAGCAACAATAGTGACTCAA
GCTACATGGGTTCGAGCTGTGGAATATAATGCTGGTGACTGTAAAGCTTGGAACGAGGGTGTTGATCTCCAAGCTTGGGCCGACGGGAAGCAATTCTATAAGGGAGACAGTATTGTTTTC
AATTACGAATGCGGAAAACACAATGTAGCGCTACTACAAGATAAAGCCTCGTTGGATAACTGA

Retrieve as FASTA  
cDNA►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTTCCTT TCTTTATAAA TTGGAAGTCC AAGATGTATC CTAGAATGCA ACAAGAAGAA ATTAAAATGG CTAACAAAAA TTTGTGTCTT TTCATCCTCA TAGCAACAAT AGTGACTCAA  GCTACATGGG TTCGAGCTGT GGAATATAAT GCTGGTGACT GTAAAGCTTG GAACGAGGGT GTTGATCTCC AAGCTTGGGC CGACGGGAAG CAATTCTATA AGGGAGACAG TATTGTTTTC  AATTACGAAT GCGGAAAACA CAATGTAGCG CTACTACAAG ATAAAGCCTC GTTGGATAAC TGAATTCTTG ATAAGCCAAT TCTAACACTC GCTGATTGTG GAAGGAATTG TCTCTTCCTA  TGTAACACAG GACCGTGTTT TGTAGCCAGC ACCAAAGGAA AGGATTGTAA GAAAGGCCTA AAGTTTTCGT TCGAAACAAA GCCATTACCT GTACTGGAAC TGGATGGAGC ACACTACTTA  ACTTAAAATT GAGGATGGCA TGTCTTGGCT TTTATACATG TTTTTTTTGT GTGTTTGTTG ATAATTGTTC ATATCGATCA GGTATGAACA ATTCTTGTTC GGATCTATAA TTATATCATA 
TGTAAGTTAC AAGGGGATTG GACAATAATA ATATCATTAT GAATTTTGGA TT 

Retrieve as FASTA