Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
327 (297) |
| PWM (Da): |
35474.02 (32005.2) |
Transmb domain: |
i12-30o |
| PI (pH): |
9.23 (8.96) |
Peptide Signal: |
cut: 31 range:31-327 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MTRRRSACEM RIATLFLLVL CSGYLSAIQA QLSPTFYAAT CPNLERIARQ WFSIGVLNAL TAPAAILRLS FHDCSVNGCD ASVLLNAGRG NTDEKASSLN LGISNLQVID GIKTAVERQC
PGVVSCADLL VLAARDAVSL SGGPRMTVQL GRRDGTTAST SAADSQLLPP TASVDRVLST FSQMGLTPME TVALLGSHTM GVGHCDSIKN RLYPQLDTTL SQNPFFAQNL KRQCPASFSN
PNTVVANDIT NIVFDNQYFR DVQGRRGLFS IDDAIRTDAR TSGFVRQFAV NRQLFFSTFQ TAYNKMAAHR VLTGTQGQIR KNCRSIN*
|
Retrieve as FASTA
|
|
| Remarks |
RnA seq but no EST found. Specific peptide found in cell wall proteome . |
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AAGCCGAAAG AAGGCAGAGA CTCCAAGAAA GCTGGTTGGC TGCCTGCCAG GGCCAGAAAC CACCGGCAAG GACTTTAGTG CTGATGGGCG AGTTAAGTCG AGCTTCGTGA CTGGAATTGC
TTAACCACCA TTTTGTTAGT CGACGGGGAA AGGATAGCGA TTTGCAGGAC CCGTGGCCTT CTTCGGACCC GAGTCCTCGA GCCCTTTGAC CTGTATATAA GTCTCCTTCA TAGGCGGAGC
TGAACACCCT CAACATTCGA ATTCAGTTGT ACCGTCGGGA CCCGGAACTG TCCGAGCTTC GTGTCGAGAG GTTTCGAGTC TAGTGCGAAG GACGCCGGTT CGGGAAGTGG TCACTGCATC
AGCAGCAGCA GCAGCAGCAG CATGACGAGA AGGAGGAGTG CTTGTGAGAT GAGAATCGCC ACCTTGTTCC TGCTCGTACT TTGCTCCGGG TACCTGAGCG CGATCCAGGC GCAGCTGAGT
CCGACATTTT ATGCGGCCAC TTGTCCGAAT TTGGAGCGGA TTGCCAGGCA GTGGTTCAGT ATCGGGGTGC TGAATGCTCT CACGGCCCCG GCTGCCATTT TGAGACTGTC GTTTCATGAC
TGCTCTGTCA ATGTGAGTAG CGAGCCCGGA CTCTGTGTCC TTGTCGATCG ACGCGGTGTT CTGCAAGGAA AATCTCGCGC AGTCGGGACA TTTAAATGGC ATTTTCACAC CTCCGTTCCC
CGTTCCTAAC CTCGGGACTG ATGTGGGATG TACGTGATGC AGGGCTGTGA CGCCTCGGTT CTTCTGAACG CGGGCCGGGG TAACACGGAC GAGAAGGCCT CGAGTTTGAA TCTGGGCATT
AGCAATTTGC AGGTCATCGA CGGAATTAAA ACTGCTGTGG AAAGGCAGTG CCCTGGAGTG GTTTCCTGCG CGGACCTTCT CGTGCTGGCT GCTCGCGATG CTGTCTCCCT CGTAAGTTCT
CCTCCTCTAT GTCTCCCACC CACTGCTGCC CGGGCAGTAG TCTCGGAACC CAGATCCTGC ACACAATGCT GTAGGATTCA ATCAGCCGCG AAATAATTTG ACCCCATTAT CGTCAAGATT
TGATTGCATC TCACTGACTG GCTCTGCTGC GAGGACATGA CAGTCTGGAG GCCCGAGGAT GACTGTTCAG CTGGGCCGCA GAGATGGAAC GACTGCCAGC ACTTCCGCCG CCGACTCTCA
ATTGCTTCCC CCCACCGCAT CTGTCGACCG AGTACTGTCT ACGTTCTCTC AGATGGGCCT GACTCCCATG GAAACTGTAG CACTCCTCGG TACGTAAAAT GGTGTTGAGT TCTAGAGTTC
AGCAGGCATA TGAGAACTCC GGCATTTCGA GTTATTGATG GTAGACCATT TGTTGACAGA GTGATAGTTT CGGACGAGGA TTTTGGCCTG ACGTGTGCTG GGACGGTGCT GCAGGATCTC
ACACCATGGG AGTTGGACAC TGCGACAGCA TAAAGAATCG ACTATACCCG CAGCTGGACA CGACTCTGTC GCAGAATCCG TTCTTCGCCC AAAATCTCAA GCGTCAGTGC CCTGCCTCCT
TCTCGAACCC GAACACAGTC GTGGCGAATG ACATAACGAA CATCGTCTTC GACAATCAGT ACTTCCGAGA CGTCCAGGGG AGGAGAGGTC TGTTCAGCAT CGACGACGCC ATCCGCACCG
ATGCCCGTAC CTCCGGCTTC GTTCGCCAGT TCGCTGTCAA CAGACAGCTC TTCTTCTCCA CCTTCCAAAC GGCTTACAAC AAAATGGCTG CGCACAGAGT GTTGACGGGC ACACAAGGGC
AGATTCGCAA GAACTGTCGA TCCATCAACT GATCAGGGCT GACTTTCCCG CTGTTCTCCA TTCTCGTCCT CTCTCTCTGT CGCTCTTCAC CTCATCGTTC TCTTTTCCAG CTCTGAGGGG
AAGAGTGGTT CACATTCCTG CCTTTGTGAA ATAGGTAGAC AAAGTGACAT AGTTTTGATA GCACTGCCGC TGTCATTTGT ATAGTGCTTC ACCTGCCTCT CTCCCTCCGA CGTTCGTCTC
TCACGAATTC AATCGAGCCT CATGGAAACA TGGTTGTGCA TGGTCGAGGG GAAGAAGAAG CTTCCATGCA ACTAGACAAG ATTTGCTGAG AGGTGGACAG AGTGTGTATC ATTAGCACCA
ACATTGTCAA AACTCTGTCC GTTTGTAATG TAGTCCTCTG TCCTCACAGA ACCTCACTTA CTCTCGCCGA ATTGTTCCAA TGTTTCACTT CATTTCCATG ATTCAACTCC TCATTTCTGA
TGTATATAAA CAAAA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACGAGAA GGAGGAGTGC TTGTGAGATG AGAATCGCCA CCTTGTTCCT GCTCGTACTT TGCTCCGGGT ACCTGAGCGC GATCCAGGCG CAGCTGAGTC CGACATTTTA TGCGGCCACT
TGTCCGAATT TGGAGCGGAT TGCCAGGCAG TGGTTCAGTA TCGGGGTGCT GAATGCTCTC ACGGCCCCGG CTGCCATTTT GAGACTGTCG TTTCATGACT GCTCTGTCAA TGGCTGTGAC
GCCTCGGTTC TTCTGAACGC GGGCCGGGGT AACACGGACG AGAAGGCCTC GAGTTTGAAT CTGGGCATTA GCAATTTGCA GGTCATCGAC GGAATTAAAA CTGCTGTGGA AAGGCAGTGC
CCTGGAGTGG TTTCCTGCGC GGACCTTCTC GTGCTGGCTG CTCGCGATGC TGTCTCCCTC TCTGGAGGCC CGAGGATGAC TGTTCAGCTG GGCCGCAGAG ATGGAACGAC TGCCAGCACT
TCCGCCGCCG ACTCTCAATT GCTTCCCCCC ACCGCATCTG TCGACCGAGT ACTGTCTACG TTCTCTCAGA TGGGCCTGAC TCCCATGGAA ACTGTAGCAC TCCTCGGATC TCACACCATG
GGAGTTGGAC ACTGCGACAG CATAAAGAAT CGACTATACC CGCAGCTGGA CACGACTCTG TCGCAGAATC CGTTCTTCGC CCAAAATCTC AAGCGTCAGT GCCCTGCCTC CTTCTCGAAC
CCGAACACAG TCGTGGCGAA TGACATAACG AACATCGTCT TCGACAATCA GTACTTCCGA GACGTCCAGG GGAGGAGAGG TCTGTTCAGC ATCGACGACG CCATCCGCAC CGATGCCCGT
ACCTCCGGCT TCGTTCGCCA GTTCGCTGTC AACAGACAGC TCTTCTTCTC CACCTTCCAA ACGGCTTACA ACAAAATGGC TGCGCACAGA GTGTTGACGG GCACACAAGG GCAGATTCGC
AAGAACTGTC GATCCATCAA CTGA
|
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AAGCCGAAAG AAGGCAGAGA CTCCAAGAAA GCTGGTTGGC TGCCTGCCAG GGCCAGAAAC CACCGGCAAG GACTTTAGTG CTGATGGGCG AGTTAAGTCG AGCTTCGTGA CTGGAATTGC
TTAACCACCA TTTTGTTAGT CGACGGGGAA AGGATAGCGA TTTGCAGGAC CCGTGGCCTT CTTCGGACCC GAGTCCTCGA GCCCTTTGAC CTGTATATAA GTCTCCTTCA TAGGCGGAGC
TGAACACCCT CAACATTCGA ATTCAGTTGT ACCGTCGGGA CCCGGAACTG TCCGAGCTTC GTGTCGAGAG GTTTCGAGTC TAGTGCGAAG GACGCCGGTT CGGGAAGTGG TCACTGCATC
AGCAGCAGCA GCAGCAGCAG CATGACGAGA AGGAGGAGTG CTTGTGAGAT GAGAATCGCC ACCTTGTTCC TGCTCGTACT TTGCTCCGGG TACCTGAGCG CGATCCAGGC GCAGCTGAGT
CCGACATTTT ATGCGGCCAC TTGTCCGAAT TTGGAGCGGA TTGCCAGGCA GTGGTTCAGT ATCGGGGTGC TGAATGCTCT CACGGCCCCG GCTGCCATTT TGAGACTGTC GTTTCATGAC
TGCTCTGTCA ATGGCTGTGA CGCCTCGGTT CTTCTGAACG CGGGCCGGGG TAACACGGAC GAGAAGGCCT CGAGTTTGAA TCTGGGCATT AGCAATTTGC AGGTCATCGA CGGAATTAAA
ACTGCTGTGG AAAGGCAGTG CCCTGGAGTG GTTTCCTGCG CGGACCTTCT CGTGCTGGCT GCTCGCGATG CTGTCTCCCT CTCTGGAGGC CCGAGGATGA CTGTTCAGCT GGGCCGCAGA
GATGGAACGA CTGCCAGCAC TTCCGCCGCC GACTCTCAAT TGCTTCCCCC CACCGCATCT GTCGACCGAG TACTGTCTAC GTTCTCTCAG ATGGGCCTGA CTCCCATGGA AACTGTAGCA
CTCCTCGGAT CTCACACCAT GGGAGTTGGA CACTGCGACA GCATAAAGAA TCGACTATAC CCGCAGCTGG ACACGACTCT GTCGCAGAAT CCGTTCTTCG CCCAAAATCT CAAGCGTCAG
TGCCCTGCCT CCTTCTCGAA CCCGAACACA GTCGTGGCGA ATGACATAAC GAACATCGTC TTCGACAATC AGTACTTCCG AGACGTCCAG GGGAGGAGAG GTCTGTTCAG CATCGACGAC
GCCATCCGCA CCGATGCCCG TACCTCCGGC TTCGTTCGCC AGTTCGCTGT CAACAGACAG CTCTTCTTCT CCACCTTCCA AACGGCTTAC AACAAAATGG CTGCGCACAG AGTGTTGACG
GGCACACAAG GGCAGATTCG CAAGAACTGT CGATCCATCA ACTGATCAGG GCTGACTTTC CCGCTGTTCT CCATTCTCGT CCTCTCTCTC TGTCGCTCTT CACCTCATCG TTCTCTTTTC
CAGCTCTGAG GGGAAGAGTG GTTCACATTC CTGCCTTTGT GAAATAGGTA GACAAAGTGA CATAGTTTTG ATAGCACTGC CGCTGTCATT TGTATAGTGC TTCACCTGCC TCTCTCCCTC
CGACGTTCGT CTCTCACGAA TTCAATCGAG CCTCATGGAA ACATGGTTGT GCATGGTCGA GGGGAAGAAG AAGCTTCCAT GCAACTAGAC AAGATTTGCT GAGAGGTGGA CAGAGTGTGT
ATCATTAGCA CCAACATTGT CAAAACTCTG TCCGTTTGTA ATGTAGTCCT CTGTCCTCAC AGAACCTCAC TTACTCTCGC CGAATTGTTC CAATGTTTCA CTTCATTTCC ATGATTCAAC
TCCTCATTTC TGATGTATAT AAACAAAA
|
Retrieve as FASTA
|
|
