Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
324 (297) |
PWM (Da): |
34921.72 (31845.2) |
Transmb domain: |
i12-34o |
PI (pH): |
8.71 (8.58) |
Peptide Signal: |
cut: 28 range:28-324 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MTRRCEMKIT TFFLLVLCSG YLSAIQAQLS PTFYAATCPN LERIARQWFS IGVLNALTAP AAILRLSFHD CAVNGCDASV LLNAGLGNTD EKSSSLNLGI SNLQVIDGIK TAVERQCPGV
VSCADLLVLA ARDAVSLSGG PRMTVQLGRR DGTTASTAAA DSELLPPTAS VDRVLSTFSQ MGLTPMETVA LLGSHTMGVG HCDNIKNRLY PQLDTTLTQN PFFAQNLKRQ CPATFSNPNT
VVANDITNIV FDNQYFRDVQ GRRGLFSIDA AIGTDARTSG FVRQFAVNRQ LFFSTFQTAY NKMAAHRVLT GTQGQIRKNC RSVN
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (contig_211:24457-25933) and RNA seq (isotig28336). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACAAGGA GGTGTGAAAT GAAAATCACC ACTTTTTTCC TGCTCGTACT TTGCTCCGGG TACTTGAGCG CGATTCAAGC ACAGCTGAGT CCGACATTTT ATGCGGCTAC ATGTCCGAAT
TTGGAGCGGA TTGCAAGGCA GTGGTTCAGT ATCGGAGTGC TGAATGCTCT CACGGCCCCG GCTGCCATTT TGAGACTGTC GTTTCATGAC TGCGCTGTCA ATGTAAGTAG CTAGTCCGGA
CCTTGTGTCC TAGTCGATGG ATGCGTGTAT TTGCCAAGGG AGTTTCTCGC GCAGTCGAGA CCAATGAATG CCTTATTTAC ACCTCCGTTC CCCGTTCCGA GCTGGGGACT CGTTACTAAC
CTCGGGAGTA ATGTCGTATG TACGTGATGC AGGGTTGTGA CGCCTCTGTT CTTCTGAACG CAGGCTTGGG TAACACGGAC GAGAAGTCAT CGAGTTTAAA TCTGGGCATA AGCAACTTGC
AGGTCATCGA CGGAATTAAA ACTGCTGTGG AAAGGCAGTG CCCTGGTGTG GTATCATGTG CGGACCTCCT CGTGCTGGCT GCTCGCGATG CTGTTTCTCT CGTAAGTTCT CTTCACTTTC
GTCTCCCACC CACTGCCGCC CTGGCATTAG TCTCCGAACC CAGCTCCTGC ACGAAGTGCT GTAGGATTCA ATCAGCCCTG ACATAATTTG ACCGCCTTAT CGTCAACGTT TAGTTGCATT
TCACTGACTG ACTCTGCTGC GGTTACATGA CAGTCTGGAG GTCCGAGGAT GACTGTTCAG CTGGGCCGCA GAGATGGAAC GACTGCCAGC ACCGCCGCTG CCGACTCTGA ATTGCTTCCC
CCCACTGCAT CTGTCGACCG AGTACTCTCT ACGTTCTCCC AGATGGGCCT AACTCCCATG GAGACTGTGG CACTCCTTGG TACGTACAAT TGTGTTGAAT TGAAGTGTTC ACCAGGCAGG
CACATGTGAG CCAAATGGAA ACCTTGCAGT ATCGAGTTAT TGGTGGTAGA ACATTTGTGG ACAGAGTGAC AGCATCAGAC AAGGATTGTA GCCTGACGTG TGCTTGGACG GTACTGCAGG
ATCTCACACC ATGGGAGTGG GACACTGCGA CAATATAAAG AATCGATTGT ATCCGCAGCT GGACACCACT CTGACGCAGA ATCCGTTCTT CGCCCAAAAC CTCAAGCGTC AGTGCCCTGC
CACCTTCTCG AACCCGAACA CGGTCGTGGC GAACGACATA ACGAACATTG TTTTCGACAA TCAGTACTTC CGAGACGTCC AGGGGAGGAG AGGTCTGTTC AGCATTGACG CAGCCATCGG
CACCGACGCC CGCACCTCTG GCTTCGTTCG CCAGTTCGCC GTCAACAGAC AGCTCTTCTT CTCCACCTTC CAAACTGCTT ACAACAAGAT GGCAGCGCAC AGAGTGCTGA CGGGCACCCA
AGGGCAAATT CGCAAGAACT GTCGATCGGT CAACTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACAAGGA GGTGTGAAAT GAAAATCACC ACTTTTTTCC TGCTCGTACT TTGCTCCGGG TACTTGAGCG CGATTCAAGC ACAGCTGAGT CCGACATTTT ATGCGGCTAC ATGTCCGAAT
TTGGAGCGGA TTGCAAGGCA GTGGTTCAGT ATCGGAGTGC TGAATGCTCT CACGGCCCCG GCTGCCATTT TGAGACTGTC GTTTCATGAC TGCGCTGTCA ATGGTTGTGA CGCCTCTGTT
CTTCTGAACG CAGGCTTGGG TAACACGGAC GAGAAGTCAT CGAGTTTAAA TCTGGGCATA AGCAACTTGC AGGTCATCGA CGGAATTAAA ACTGCTGTGG AAAGGCAGTG CCCTGGTGTG
GTATCATGTG CGGACCTCCT CGTGCTGGCT GCTCGCGATG CTGTTTCTCT CTCTGGAGGT CCGAGGATGA CTGTTCAGCT GGGCCGCAGA GATGGAACGA CTGCCAGCAC CGCCGCTGCC
GACTCTGAAT TGCTTCCCCC CACTGCATCT GTCGACCGAG TACTCTCTAC GTTCTCCCAG ATGGGCCTAA CTCCCATGGA GACTGTGGCA CTCCTTGGAT CTCACACCAT GGGAGTGGGA
CACTGCGACA ATATAAAGAA TCGATTGTAT CCGCAGCTGG ACACCACTCT GACGCAGAAT CCGTTCTTCG CCCAAAACCT CAAGCGTCAG TGCCCTGCCA CCTTCTCGAA CCCGAACACG
GTCGTGGCGA ACGACATAAC GAACATTGTT TTCGACAATC AGTACTTCCG AGACGTCCAG GGGAGGAGAG GTCTGTTCAG CATTGACGCA GCCATCGGCA CCGACGCCCG CACCTCTGGC
TTCGTTCGCC AGTTCGCCGT CAACAGACAG CTCTTCTTCT CCACCTTCCA AACTGCTTAC AACAAGATGG CAGCGCACAG AGTGCTGACG GGCACCCAAG GGCAAATTCG CAAGAACTGT
CGATCGGTCA ACTGA
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Retrieve as FASTA
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