Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
331 (306) |
PWM (Da): |
36571.46 (33721.0) |
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PI (pH): |
7.5 (7.76) |
Peptide Signal: |
cut: 26 range:26-331 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MTFNSLSIHL LPVFVFVLST VGVDAGAANP SYGLQDDYYR HSCPSAESVV RRVVMGNVTV VDNRKFAAGL LRLSFHDCFV EGCDASVLLY GPGTEKTAPV NKFLQSLEIL DKAKQELEKI
CPGVVSCADI LQYAARDGVI ALNGSSWKVQ GGRRDGRVSR AESAEKEIPS QDFDLDGLTA SFKRKGLSRD QMVILSGAHT SAAGHCENLV RRLYNFNSTH ATDPSIPAAY AAELKATCPR
KTFNDTVFIT MDAVSAFFDA GYYVTLEEHK GVFTSDQILF DDHRTRPLVK TLTDYKLFEK KFHQAMRAMA AIGVKLYDGE IRKDCRFINS Y*
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Retrieve as FASTA
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Remarks |
two pseudo not predicted are found close to the complete prediction. RNA seq but no EST found. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CCCAACAATC TGAGAGCGAG TTCCACTCAG CAGATTAGAA TCATTGTCAT TCGGGTGATG AGCAAAAATG ACTTTCAACA GCCTTAGCAT TCATCTTCTT CCAGTTTTTG TTTTCGTATT
GTCCACGGTT GGAGTGGATG CTGGAGCTGC TAATCCCAGC TACGGTTTAC AAGATGACTA CTATCGTCAT TCATGCCCAA GTGCCGAGTC AGTGGTGAGG AGAGTTGTGA TGGGGAATGT
CACCGTTGTC GACAATCGGA AGTTTGCTGC GGGCCTCCTA CGTCTATCAT TTCACGATTG CTTCGTCGAG GTGAGTACCT CGAAACCAGC ATCAGGTTGC AGTTGCATGT CATCTGCATC
TAGTATACAT CTGCAGCCTT GCACGGTAAA CTCTATGATC GGTCACAAGA AAGTCAGTTC ACTGCAAGTT TAATCGCCTT GAGTTCGAGA AGCCAATAGG ATGGGATGGA CATTGAGACT
TGGTTTCCAA AACAGTTACT TTAAGCTCGA GAGTGTGTGT GTGCATTATT TGGCAGGGCT GCGACGCATC CGTTCTTCTG TATGGTCCCG GCACAGAGAA GACTGCACCT GTTAATAAGT
TCCTCCAAAG TTTAGAGATC CTTGATAAAG CCAAGCAAGA GCTGGAGAAG ATCTGCCCTG GCGTGGTGTC GTGCGCCGAC ATCTTGCAGT ATGCAGCTCG CGATGGCGTC ATCGCCGTAA
GAGCATACTC ATTCGGCCTT TGCCTGAGTA GCTGCTACAT GGAACTCAAA CTTGACTACC TTCATTTCCA TGAGCTTAAA TTTTAGCAAA ATTGCACTAA ATCTGACATC TAACTGAAGG
GGCTCTAAAT AGGAGTTGCC CTCCGCTCTT GCCCTCGAAG ACAATTCAGA ACTCATATTC AGATTTTTGC AACTGGTGTT GCAGCTCAAC GGCTCAAGCT GGAAGGTGCA AGGAGGACGG
AGAGATGGCC GTGTGTCAAG GGCTGAATCC GCCGAAAAAG AAATCCCTTC ACAAGATTTT GACTTGGATG GATTGACTGC ATCGTTCAAA AGAAAGGGAC TTTCCAGGGA TCAAATGGTC
ATTCTTTCAG GTACAAGCAC TTGGATCATT CTGATTAGCT GCTTCAGGAG ACACCTCTAC TTACAACCAA ATTCTGCATT ACGCTTGAGG GTTTCTATAA TGAAATTCAT AAATGATGTT
GTCTATATTG AACCAGGAGC ACATACTTCA GCGGCCGGCC ACTGCGAGAA CCTCGTTAGA AGACTTTACA ATTTCAATTC GACTCATGCC ACTGATCCGT CGATTCCTGC TGCTTATGCG
GCCGAGCTGA AGGCCACATG TCCCCGAAAG ACATTTAACG ACACTGTCTT TATCACAATG GATGCGGTCT CAGCATTCTT CGACGCCGGA TATTATGTGA CTCTCGAAGA GCACAAGGGG
GTGTTCACTT CGGATCAGAT TCTGTTCGAC GATCATCGTA CTCGGCCTCT GGTGAAAACT TTGACTGACT ACAAACTGTT CGAGAAGAAA TTCCACCAAG CTATGCGCGC TATGGCTGCA
ATCGGAGTCA AATTGTATGA TGGAGAAATT CGAAAAGACT GTCGCTTTAT AAATTCGTAC TGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACTTTCA ACAGCCTTAG CATTCATCTT CTTCCAGTTT TTGTTTTCGT ATTGTCCACG GTTGGAGTGG ATGCTGGAGC TGCTAATCCC AGCTACGGTT TACAAGATGA CTACTATCGT
CATTCATGCC CAAGTGCCGA GTCAGTGGTG AGGAGAGTTG TGATGGGGAA TGTCACCGTT GTCGACAATC GGAAGTTTGC TGCGGGCCTC CTACGTCTAT CATTTCACGA TTGCTTCGTC
GAGGGCTGCG ACGCATCCGT TCTTCTGTAT GGTCCCGGCA CAGAGAAGAC TGCACCTGTT AATAAGTTCC TCCAAAGTTT AGAGATCCTT GATAAAGCCA AGCAAGAGCT GGAGAAGATC
TGCCCTGGCG TGGTGTCGTG CGCCGACATC TTGCAGTATG CAGCTCGCGA TGGCGTCATC GCCCTCAACG GCTCAAGCTG GAAGGTGCAA GGAGGACGGA GAGATGGCCG TGTGTCAAGG
GCTGAATCCG CCGAAAAAGA AATCCCTTCA CAAGATTTTG ACTTGGATGG ATTGACTGCA TCGTTCAAAA GAAAGGGACT TTCCAGGGAT CAAATGGTCA TTCTTTCAGG AGCACATACT
TCAGCGGCCG GCCACTGCGA GAACCTCGTT AGAAGACTTT ACAATTTCAA TTCGACTCAT GCCACTGATC CGTCGATTCC TGCTGCTTAT GCGGCCGAGC TGAAGGCCAC ATGTCCCCGA
AAGACATTTA ACGACACTGT CTTTATCACA ATGGATGCGG TCTCAGCATT CTTCGACGCC GGATATTATG TGACTCTCGA AGAGCACAAG GGGGTGTTCA CTTCGGATCA GATTCTGTTC
GACGATCATC GTACTCGGCC TCTGGTGAAA ACTTTGACTG ACTACAAACT GTTCGAGAAG AAATTCCACC AAGCTATGCG CGCTATGGCT GCAATCGGAG TCAAATTGTA TGATGGAGAA
ATTCGAAAAG ACTGTCGCTT TATAAATTCG TACTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CCCAACAATC TGAGAGCGAG TTCCACTCAG CAGATTAGAA TCATTGTCAT TCGGGTGATG AGCAAAAATG ACTTTCAACA GCCTTAGCAT TCATCTTCTT CCAGTTTTTG TTTTCGTATT
GTCCACGGTT GGAGTGGATG CTGGAGCTGC TAATCCCAGC TACGGTTTAC AAGATGACTA CTATCGTCAT TCATGCCCAA GTGCCGAGTC AGTGGTGAGG AGAGTTGTGA TGGGGAATGT
CACCGTTGTC GACAATCGGA AGTTTGCTGC GGGCCTCCTA CGTCTATCAT TTCACGATTG CTTCGTCGAG GGCTGCGACG CATCCGTTCT TCTGTATGGT CCCGGCACAG AGAAGACTGC
ACCTGTTAAT AAGTTCCTCC AAAGTTTAGA GATCCTTGAT AAAGCCAAGC AAGAGCTGGA GAAGATCTGC CCTGGCGTGG TGTCGTGCGC CGACATCTTG CAGTATGCAG CTCGCGATGG
CGTCATCGCC CTCAACGGCT CAAGCTGGAA GGTGCAAGGA GGACGGAGAG ATGGCCGTGT GTCAAGGGCT GAATCCGCCG AAAAAGAAAT CCCTTCACAA GATTTTGACT TGGATGGATT
GACTGCATCG TTCAAAAGAA AGGGACTTTC CAGGGATCAA ATGGTCATTC TTTCAGGAGC ACATACTTCA GCGGCCGGCC ACTGCGAGAA CCTCGTTAGA AGACTTTACA ATTTCAATTC
GACTCATGCC ACTGATCCGT CGATTCCTGC TGCTTATGCG GCCGAGCTGA AGGCCACATG TCCCCGAAAG ACATTTAACG ACACTGTCTT TATCACAATG GATGCGGTCT CAGCATTCTT
CGACGCCGGA TATTATGTGA CTCTCGAAGA GCACAAGGGG GTGTTCACTT CGGATCAGAT TCTGTTCGAC GATCATCGTA CTCGGCCTCT GGTGAAAACT TTGACTGACT ACAAACTGTT
CGAGAAGAAA TTCCACCAAG CTATGCGCGC TATGGCTGCA ATCGGAGTCA AATTGTATGA TGGAGAAATT CGAAAAGACT GTCGCTTTAT AAATTCGTAC TGA
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Retrieve as FASTA
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