Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
334 (309) |
PWM (Da): |
36289.4 (33694.9) |
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PI (pH): |
6.5 (6.62) |
Peptide Signal: |
cut: 26 range:26-334 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAFTSLGIHL LPVLVFLLST VGVDAGAGKL CYGLQDNYYR HSCPSAESVV RRVVRANVSD PNNPLNLRFA SGLVRLAFHD CFVQGCDASV LLNGPGTEKA APVNKFLTGF EILDEAKQEL
EKICPGVVSC ADILQYAARD SVVALNGSSW KVQGGRRDGF VSRADSAESE ITSPDLDLDG LTASFNRKGL SREQMVILSG SHTAAAGHCE NLVKRLYNFN STHATDPSIP AAYAAQLKAT
CPQKTFNDTV FIILDVVTPF FDAGYYLTLK QHKGVFSSDQ ILFDDPRTRP LVESLTEDKL FEKEFGEAMR AMGAVGVKQH DGEIRKDCRK INKY
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (3 introns, contig_1720:8470-10063). No expression data. two pseudo are found close to the complete prediction |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTTTA CCAGCCTTGG CATTCATCTT CTTCCAGTTC TTGTTTTCCT ATTGTCCACT GTTGGAGTGG ATGCTGGCGC TGGAAAACTC TGCTACGGTT TACAAGATAA CTACTATCGT
CATTCATGCC CAAGTGCCGA GTCGGTGGTG AGGAGAGTTG TGCGTGCGAA TGTCAGTGAT CCCAACAATC CATTAAATTT GAGGTTTGCT TCGGGCCTCG TACGTCTGGC ATTTCACGAT
TGCTTCGTCC AGGTGAGTAC CTCGAAACCA ACATCATGTT GCAGTTGTAT GTCATCTTCA TCTAGTATAC ATGTGCAGCC TTGCACGGTA AACTTTATGA TCGGTCACAA GAAATGCCGT
TCACCGCGAG TGATAGCACC TTTGAGTTCG AGAAGATATT TGGGTCTGGT GGACGTTGAG AAGAGCACGT GTTTTCTAGA ACAGCTATTT TAAACTCGAG TGTGCGTGTG TGTGCGTGTG
TGCGCGTCAT TTGGCAGGGC TGCGACGCAT CCGTTCTTCT GAATGGTCCT GGTACAGAGA AGGCTGCACC TGTCAATAAG TTTTTGACAG GTTTCGAGAT ACTAGATGAA GCCAAACAAG
AGCTGGAAAA GATATGCCCT GGTGTGGTGT CGTGCGCCGA CATATTGCAG TATGCAGCTC GCGATAGCGT CGTTGCCGTA AGAGCATCCT CCTTCGGCCT TCGACTGAGT AGTAGCTCCA
GTGAGCTCAA AATTGGCTAG CTTCATATCC ATGGTCTCAA CTTTTAGCAT AATGCACAAA AGATGAAACT TACGGCATCT AACTCAATGG GCTCTTAGCG AAATTTGTCT CATCTAGGTA
CCTAGAAGAG AATTTAGATC TCACCTTCAG ATTTTTGCAA ATGGATCTTG CAGCTTAACG GCTCAAGCTG GAAGGTGCAA GGAGGAAGGA GAGATGGCTT TGTGTCAAGG GCTGATTCCG
CCGAATCGGA AATCACTTCA CCAGATCTGG ATTTGGATGG ATTGACAGCG TCTTTCAATA GAAAAGGACT TTCCAGGGAA CAGATGGTCA TTCTTTCAGG TACAAGCACT TACATCATTC
TTATTAGCTG CTACTGGAGA TGTCTTTGCT TACAAGAAAG GAACTGCATT ACGCTTGTGT GCTTCTGTCA TTAGACTCAT AGATGATGTT GGCTGTGTTT CACACAGGAT CACATACTGC
AGCAGCCGGC CACTGCGAAA ACCTTGTTAA ACGACTGTAC AATTTCAACT CGACTCATGC TACTGATCCG TCAATCCCTG CTGCATATGC GGCCCAGCTG AAGGCCACTT GTCCGCAAAA
GACCTTTAAC GATACTGTCT TTATCATATT GGATGTGGTC ACACCATTCT TCGACGCCGG ATATTATCTG ACTCTCAAAC AGCACAAGGG AGTGTTCAGT TCGGATCAGA TTTTGTTTGA
TGATCCTCGT ACTCGGCCTC TGGTGGAATC TTTGACGGAA GACAAACTGT TTGAGAAGGA ATTCGGCGAA GCTATGCGCG CTATGGGTGC TGTTGGGGTC AAGCAACATG ATGGAGAAAT
TCGAAAAGAC TGTCGAAAGA TCAATAAGTA CTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTTTA CCAGCCTTGG CATTCATCTT CTTCCAGTTC TTGTTTTCCT ATTGTCCACT GTTGGAGTGG ATGCTGGCGC TGGAAAACTC TGCTACGGTT TACAAGATAA CTACTATCGT
CATTCATGCC CAAGTGCCGA GTCGGTGGTG AGGAGAGTTG TGCGTGCGAA TGTCAGTGAT CCCAACAATC CATTAAATTT GAGGTTTGCT TCGGGCCTCG TACGTCTGGC ATTTCACGAT
TGCTTCGTCC AGGGCTGCGA CGCATCCGTT CTTCTGAATG GTCCTGGTAC AGAGAAGGCT GCACCTGTCA ATAAGTTTTT GACAGGTTTC GAGATACTAG ATGAAGCCAA ACAAGAGCTG
GAAAAGATAT GCCCTGGTGT GGTGTCGTGC GCCGACATAT TGCAGTATGC AGCTCGCGAT AGCGTCGTTG CCCTTAACGG CTCAAGCTGG AAGGTGCAAG GAGGAAGGAG AGATGGCTTT
GTGTCAAGGG CTGATTCCGC CGAATCGGAA ATCACTTCAC CAGATCTGGA TTTGGATGGA TTGACAGCGT CTTTCAATAG AAAAGGACTT TCCAGGGAAC AGATGGTCAT TCTTTCAGGA
TCACATACTG CAGCAGCCGG CCACTGCGAA AACCTTGTTA AACGACTGTA CAATTTCAAC TCGACTCATG CTACTGATCC GTCAATCCCT GCTGCATATG CGGCCCAGCT GAAGGCCACT
TGTCCGCAAA AGACCTTTAA CGATACTGTC TTTATCATAT TGGATGTGGT CACACCATTC TTCGACGCCG GATATTATCT GACTCTCAAA CAGCACAAGG GAGTGTTCAG TTCGGATCAG
ATTTTGTTTG ATGATCCTCG TACTCGGCCT CTGGTGGAAT CTTTGACGGA AGACAAACTG TTTGAGAAGG AATTCGGCGA AGCTATGCGC GCTATGGGTG CTGTTGGGGT CAAGCAACAT
GATGGAGAAA TTCGAAAAGA CTGTCGAAAG ATCAATAAGT ACTGA
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Retrieve as FASTA
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