Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
335 (311) |
PWM (Da): |
36045.78 (33525.5) |
|
PI (pH): |
4.59 (4.47) |
Peptide Signal: |
cut: 25 range:25-335 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASRRQAVAS CAFGLLMLAL ACNADLTDDF YALSCPNVTT IVRDLVTTQV AADVGIAAGL LRLHFHDCFV MGCDGSVLLN ATSTLEESER DSPPNANSLR GFEQVDEIKA ALEQQCPGMV
SCADILALAA RDATELTGGP TWPVPLGRRD GYISSSEEAQ KKLPPSDGSF IDLVRNFANV GLDALDMVIL SGAHTLGRGR CVKVWDRLYN FTGVPDLTDP SMDPTFADDL KVKCPKDNTG
TFIMMDTTDG VFDNVYYQDV GSKRGLFESD SALLENPIGS NLVTSISTNQ SSFFDAFALS MVKMGKIDLK LGTQGEVRRK CAVTNPSRHP RAFSA*
|
Retrieve as FASTA
|
|
Remarks |
RNA seq. |
DNA ►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCATCCA GGAGGCAGGC AGTTGCATCA TGTGCCTTCG GACTTTTGAT GCTGGCACTA GCTTGCAATG CAGATTTGAC TGATGACTTC TATGCGCTAA GTTGCCCCAA TGTGACTACC
ATCGTTCGAG ATCTGGTGAC GACCCAAGTT GCAGCGGATG TGGGAATTGC TGCAGGGCTC TTACGTCTCC ATTTCCACGA TTGCTTCGTC ATGGTAACAA TCTGTCTCTC TTTCGGATGA
CGAACAAACT TTAAAGCGAT TCTTGATCGT GATAGGCTTC TGGAAGTAAA AAAACAGTCT TCTGAAGTGG CATTGTAGTG GACATCCAAA AGTCGTTGCT TGCACTGTAA ATATCAGCCT
GTCATGATCT TGCACGGTAA GTCATTTGCT CACAGGCTGC TGTATAGCCT TCACAGTCTT CACACAAGGA CGTAAGAAGA GCCACAAAAC CAGACATTGA GATAAAGATG GAATGAAAAT
GCCGTAGTAC GGTCAGTTCA GAGATTCACT ACTCTGATTG GTGTGTCAAA CGCAGTTTCC AGAGTTGAAC TTCATTGTGG TGTGTTGAAA TTTGGAATCT CGGATGCTAT TATTGTGCAG
GGCTGCGATG GATCTGTTCT CCTCAATGCA ACTTCCACCT TAGAGGAATC CGAAAGAGAT TCCCCACCGA ATGCCAATTC TCTGCGGGGT TTCGAGCAGG TTGATGAAAT CAAGGCTGCT
CTTGAACAGC AATGCCCCGG AATGGTTTCC TGCGCCGACA TTCTGGCTCT GGCAGCTCGT GACGCTACCG AACTGGTAAC CTCTCGTTTG AGTCAAAAAC CAGATCAAGT TTCATTCGAT
TTCACTCGAA GTTCCATCCA AATTTTAGAT ATCTGGCTTA TATCTACCTT GCAAGAAAAC AGGCAACCAC TGATATCAGA CAGATTTGCA ACGAACAGAA CAAAGTCTCT GACAACTTTT
TGAGGATAGT GTCATCGTTA TGCGTTCTGT ATATACAAAC TATATATGTT TGGCTCCTCT CTGTTCTATC AGTGAGGAGA TTCAAATGAG TCTACAACCA GATGATTGAT TTATATCACA
TTCACTAACT GAAGATGTTC TCTCACGATC AGACTGGAGG ACCTACATGG CCTGTTCCTT TGGGCCGCAG GGATGGATAC ATCTCGTCCT CAGAAGAGGC TCAGAAGAAG CTACCACCCT
CTGATGGAAG CTTCATCGAT CTGGTCAGAA ATTTTGCTAA TGTTGGCCTC GATGCCCTCG ACATGGTCAT CCTATCCGGT AAGTGGAAGC TCATTGCCAC TACCAGAGAA TTCGAGGAAG
TAATACTTGA GTTGTTCTCG AATGTAGGAA CCAGGATCAA CTGAGAGTCT TTTTATTCCA ATTGCCCTCA ACATGGTTTG GAGTTTCTCG TTGAAGATTT ACGTTTAAAT TGCAACGACA
CCCAACTCTA ATTTTCAGTT TGTACATGCT TCCGTAGGTG CCCACACACT AGGACGCGGA CGTTGCGTGA AAGTGTGGGA CCGTCTGTAC AATTTTACCG GAGTTCCCGA CCTCACGGAT
CCATCCATGG ATCCGACCTT CGCCGACGAC CTGAAGGTGA AATGCCCCAA GGACAACACG GGCACGTTCA TTATGATGGA CACCACCGAC GGAGTGTTCG ACAACGTGTA CTACCAGGAC
GTGGGAAGCA AGAGAGGATT GTTCGAATCC GATTCGGCAC TCCTCGAGAA CCCCATCGGC TCGAACCTCG TGACATCTAT TTCCACCAAC CAGAGCTCCT TCTTCGACGC CTTCGCCCTG
TCGATGGTGA AGATGGGCAA AATCGATCTG AAACTCGGAA CTCAAGGAGA GGTTCGTCGG AAGTGTGCCG TCACCAACCC ATCCAGACAC CCGAGGGCAT TTTCAGCCTG A
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCATCCA GGAGGCAGGC AGTTGCATCA TGTGCCTTCG GACTTTTGAT GCTGGCACTA GCTTGCAATG CAGATTTGAC TGATGACTTC TATGCGCTAA GTTGCCCCAA TGTGACTACC
ATCGTTCGAG ATCTGGTGAC GACCCAAGTT GCAGCGGATG TGGGAATTGC TGCAGGGCTC TTACGTCTCC ATTTCCACGA TTGCTTCGTC ATGGGCTGCG ATGGATCTGT TCTCCTCAAT
GCAACTTCCA CCTTAGAGGA ATCCGAAAGA GATTCCCCAC CGAATGCCAA TTCTCTGCGG GGTTTCGAGC AGGTTGATGA AATCAAGGCT GCTCTTGAAC AGCAATGCCC CGGAATGGTT
TCCTGCGCCG ACATTCTGGC TCTGGCAGCT CGTGACGCTA CCGAACTGAC TGGAGGACCT ACATGGCCTG TTCCTTTGGG CCGCAGGGAT GGATACATCT CGTCCTCAGA AGAGGCTCAG
AAGAAGCTAC CACCCTCTGA TGGAAGCTTC ATCGATCTGG TCAGAAATTT TGCTAATGTT GGCCTCGATG CCCTCGACAT GGTCATCCTA TCCGGTGCCC ACACACTAGG ACGCGGACGT
TGCGTGAAAG TGTGGGACCG TCTGTACAAT TTTACCGGAG TTCCCGACCT CACGGATCCA TCCATGGATC CGACCTTCGC CGACGACCTG AAGGTGAAAT GCCCCAAGGA CAACACGGGC
ACGTTCATTA TGATGGACAC CACCGACGGA GTGTTCGACA ACGTGTACTA CCAGGACGTG GGAAGCAAGA GAGGATTGTT CGAATCCGAT TCGGCACTCC TCGAGAACCC CATCGGCTCG
AACCTCGTGA CATCTATTTC CACCAACCAG AGCTCCTTCT TCGACGCCTT CGCCCTGTCG ATGGTGAAGA TGGGCAAAAT CGATCTGAAA CTCGGAACTC AAGGAGAGGT TCGTCGGAAG
TGTGCCGTCA CCAACCCATC CAGACACCCG AGGGCATTTT CAGCCTGA
|
Retrieve as FASTA
|
|
cDNA►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CTCCGGCGAA AAGAGCCGCA GCTGCAGCAT GCACGTCGTA ATGCTGCTAG CTAGCTAGCT CCGAGCTTGC GGCCAGGGGG TGGGGGCGGC GGGCGCGGAG AGAGAAGCTG ATTTCTCCAT
TGCAGAGTGT GCGTTTGTGG GCGTCGTGCA GAGCGTTCTC GCCCGGTCCT GCAACCGAGA AGCGTATCAA ATGGTGCTCT GGGGATCTAT TTCTGGAAGA TCCACGCCCG CGAATCAACG
TCGTCACTAG TCTCACTCAC ATTCGCGGCC GCGGGCTCAT ATTGGAGCCT GTGCTCGTTT GCATGATTGC ATGTGTGTCC GAGATGTTCT TGCCTTGGAT GCGATCGCGG CCTGTGGCTG
GCGGACCATG TGGACCAAGA CTGGACTCTG ATGAATGATG TGAGATAATC ATGGTCAAGC TCCCAGTGCC ATCCGAGAAG GGCCAGGAGA GAGAGGGGAG AGAGGTGGCG CCGTGTCATG
GGCCCTCTGT TGTCGGGCCG CAACAGATGC CGAAACTGCA GGCCAGGCCC GCAGCTGCGA GTATATGACA ATTGTGAATC ATATGGGTCC CAAACAGAGA GAGAGAAGCC AAAGCGAGCA
ACTTCCAATC GGCTCCTTAT AACCTCCCTG GGATCTCCCG AAGCCTGACA GTAATCGAGT CAACAACTTC TCGTGGTCTG AACTCATGAC GGTTTCAGAC GTTCGTGGAT GACGAATTGC
TGAAGCTGAG ATTTTTTTTA GCCAAAGCAG TGATATCCGT CAACATTCAA GCGATCATGG CATCCAGGAG GCAGGCAGTT GCATCATGTG CCTTCGGACT TTTGATGCTG GCACTAGCTT
GCAATGCAGA TTTGACTGAT GACTTCTATG CGCTAAGTTG CCCCAATGTG ACTACCATCG TTCGAGATCT GGTGACGACC CAAGTTGCAG CGGATGTGGG AATTGCTGCA GGGCTCTTAC
GTCTCCATTT CCACGATTGC TTCGTCATGG GCTGCGATGG ATCTGTTCTC CTCAATGCAA CTTCCACCTT AGAGGAATCC GAAAGAGATT CCCCACCGAA TGCCAATTCT CTGCGGGGTT
TCGAGCAGGT TGATGAAATC AAGGCTGCTC TTGAACAGCA ATGCCCCGGA ATGGTTTCCT GCGCCGACAT TCTGGCTCTG GCAGCTCGTG ACGCTACCGA ACTGACTGGA GGACCTACAT
GGCCTGTTCC TTTGGGCCGC AGGGATGGAT ACATCTCGTC CTCAGAAGAG GCTCAGAAGA AGCTACCACC CTCTGATGGA AGCTTCATCG ATCTGGTCAG AAATTTTGCT AATGTTGGCC
TCGATGCCCT CGACATGGTC ATCCTATCCG GTGCCCACAC ACTAGGACGC GGACGTTGCG TGAAAGTGTG GGACCGTCTG TACAATTTTA CCGGAGTTCC CGACCTCACG GATCCATCCA
TGGATCCGAC CTTCGCCGAC GACCTGAAGG TGAAATGCCC CAAGGACAAC ACGGGCACGT TCATTATGAT GGACACCACC GACGGAGTGT TCGACAACGT GTACTACCAG GACGTGGGAA
GCAAGAGAGG ATTGTTCGAA TCCGATTCGG CACTCCTCGA GAACCCCATC GGCTCGAACC TCGTGACATC TATTTCCACC AACCAGAGCT CCTTCTTCGA CGCCTTCGCC CTGTCGATGG
TGAAGATGGG CAAAATCGAT CTGAAACTCG GAACTCAAGG AGAGGTTCGT CGGAAGTGTG CCGTCACCAA CCCATCCAGA CACCCGAGGG CATTTTCAGC CTGAAGTTGA GACCACCACG
AGATGATCCA CTTCATAGGC TATCATCATC ATCATTGTTT CTTTTAGAAA TTCTTTTAGG AAGGAAATTT CCTAGGCACT TAGTAACAGT AATCTCACTA GTCCTGAAAC TCTGTCTGGT
CCGAGCAGAT GCTCAATCGA CCTCGGTCTT TTTTACACAT CAGTATACAT ACATAGAGCT TCATCAAGCT GCTGCTGCTA CTGCTGCTAG TTAGGAAGGT CTGTTGTTCA TGGCTTTGCG
AACTCTTCTG CAAGTGGAGT TGAGAAAGCT TCTGGAGTAC ATAGTACGAC GTCTATGCCT TCACATGAAC CAGGCCATCG CGACTACTTA TCATATGGCC TCCGCATGCA TGTTTTTATA
TGTGCGGTCC ATTTCAGAAA CTAAATACAT CAGTGTACTG TTAAAAGAAG TGAAGAGATA TTTAATACAT GAATACACAT TCATGAGATT CTATCGTCTC TCTGCACAGC TATATGATGC
TC
|
Retrieve as FASTA
|
|