Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
335 (311) |
PWM (Da): |
35873.73 (33569.6) |
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PI (pH): |
4.66 (4.59) |
Peptide Signal: |
cut: 25 range:25-335 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASSKQAVAS CAVGLLMLAL ACNAQLADDY YELSCPNVTS IVRDLVKTQV AADVGIAAGL LRLHFHDCFV MGCDASVLLN ATSTLEESER DSPPNANSLR GFEQVDEIKA ALEQQCPGIV
SCADILALAA RDATEETGGP TWPVPLGRRD GYISSSAEAQ KKLPPSDGTF IDLVRNFANV GLDTIDMVIL SGAHTLGRGR CVKVWNRLYN FTGVDDLTDP SMDPTFADEL KVKCPKDNTG
TFIMMDTTDG TFDNVYYQDV GSKKGLFESD AALLQNPIGS NLVTSVSTNQ SSFFDAFALS MVKMGKIDLK LGTQGEVRRK CAVSNPSRHP RAYSA
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Retrieve as FASTA
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Remarks |
Complete sequnce from genomic (3 introns, contig_12037:8104-10079) and RNA seq (isotig2723). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCATCCT CGAAGCAGGC AGTGGCATCA TGTGCCGTCG GACTTCTGAT GCTAGCACTA GCTTGCAATG CACAATTGGC CGATGACTAC TATGAGTTAA GTTGCCCCAA TGTGACTAGC
ATCGTCCGAG ATCTGGTGAA GACGCAAGTT GCAGCGGATG TGGGAATTGC TGCAGGGCTC TTACGTCTCC ATTTCCACGA TTGCTTCGTC ATGGTAACAA TCTGTCTATC TTTGGATGAC
GAATAACCTT TGAAGCGTTT CTTGATCATA CTAGGCTTCT GGGAGGATAT TAAACAGTCC AATGCAACTA TCTTCAAGCG CAGTCATTGT AGTGGGCATC CAGAAATCGT TGCTTGTACT
GTAAATGTCA GTCTGTCATG ATCTTGCACG GTCATTCACT CTCTCACAGG CTGCTGTGTA GACTTCCTTG TCTTCACACA AGGACCGAAG ACGATCTATA ACACCAGACG CTGAGATAAA
GATGGAGAGT GGAAATGCCG TAGTACGGTC AGCTCAGAGA TTCACTACTC TGAATGGTCT GTCAATCGCA ACTTGCAGAG TTGAACTCGA TTGTGGAGTG TTGAATTTTG AATCTCGGAT
GCTATTATTG TGCAGGGCTG CGATGCATCT GTTCTCCTCA ATGCAACTTC CACCTTAGAG GAGTCCGAAA GAGATTCCCC ACCTAATGCG AATTCTCTGC GGGGGTTCGA GCAGGTTGAT
GAAATCAAGG CTGCTCTTGA ACAGCAATGC CCCGGAATCG TTTCCTGCGC TGACATTCTG GCTCTAGCAG CTCGTGACGC TACCGAAGAG GTAATTTCTC ACTTGAATCA AAAAACCAGA
TCAAGTTTCA TTCGATCACT CGAAGTTCTA TCACAATTTT ATTCATCTGG CTAATATCTC CTTTTCGAGA AAAACAGGCA ACTCAAACAG TCAAACACTG ATATCTGATA AAGTTGCAAC
CAACAATACG AAGTCTCTTA CAGTAGTTTG TGAGCTAAGT GTTATTATGG TTATGAGTTC CACAAATCCA AACTAGTTGT CTTTGGTTCA TCTCGTTCTA GAGATTGTGC TCTATCAGTG
AGATACAAAT GGGTCTCTTG AACCAGATGA TTGATTTATA TCACATTCAC TAATTCAAGA TGTTCTCTCA CGATCAGACT GGAGGACCAA CATGGCCTGT TCCTTTGGGC CGCAGGGATG
GATACATCTC ATCCTCAGCA GAGGCTCAGA AGAAGCTACC ACCCTCTGAT GGAACCTTCA TCGATCTGGT CAGAAATTTT GCTAATGTTG GCCTCGACAC CATAGACATG GTCATCCTAT
CCGGTACGTG GTACTGTGGA AGCTTGATGC CACTATCAGA TAATTGGAGA AAATATTCCT TGAGTTGTTC TTGAATCTAG TAAATCAGGT TCAACTAGGA ATTTATTATC CAGAATCTAT
TTATTCCAGT TGCCCATATG GTTTTGAGTT TCTCATTCAA GATTTACATT AAGATTGCAA CGGCACTCAA CTCTAATCTT CATTTTGTTC ATACTGCGAT AGGTGCCCAC ACATTGGGAC
GCGGACGTTG CGTGAAAGTG TGGAACCGTT TGTACAATTT TACCGGAGTT GACGATCTCA CGGATCCATC CATGGATCCG ACCTTCGCCG ACGAGCTTAA GGTTAAATGC CCCAAGGACA
ACACGGGCAC GTTCATTATG ATGGACACCA CCGACGGAAC ATTCGACAAC GTGTACTACC AGGACGTGGG AAGCAAGAAA GGATTGTTCG AATCCGATGC AGCACTCCTC CAGAACCCCA
TCGGCTCGAA CCTTGTGACA TCTGTATCCA CCAACCAGAG CTCTTTCTTC GACGCCTTCG CCCTGTCGAT GGTGAAGATG GGCAAAATCG ATCTGAAACT CGGAACTCAA GGAGAGGTTC
GTCGGAAATG TGCCGTCAGC AACCCATCGA GACACCCGAG GGCATATTCA GCCTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCATCCT CGAAGCAGGC AGTGGCATCA TGTGCCGTCG GACTTCTGAT GCTAGCACTA GCTTGCAATG CACAATTGGC CGATGACTAC TATGAGTTAA GTTGCCCCAA TGTGACTAGC
ATCGTCCGAG ATCTGGTGAA GACGCAAGTT GCAGCGGATG TGGGAATTGC TGCAGGGCTC TTACGTCTCC ATTTCCACGA TTGCTTCGTC ATGGGCTGCG ATGCATCTGT TCTCCTCAAT
GCAACTTCCA CCTTAGAGGA GTCCGAAAGA GATTCCCCAC CTAATGCGAA TTCTCTGCGG GGGTTCGAGC AGGTTGATGA AATCAAGGCT GCTCTTGAAC AGCAATGCCC CGGAATCGTT
TCCTGCGCTG ACATTCTGGC TCTAGCAGCT CGTGACGCTA CCGAAGAGAC TGGAGGACCA ACATGGCCTG TTCCTTTGGG CCGCAGGGAT GGATACATCT CATCCTCAGC AGAGGCTCAG
AAGAAGCTAC CACCCTCTGA TGGAACCTTC ATCGATCTGG TCAGAAATTT TGCTAATGTT GGCCTCGACA CCATAGACAT GGTCATCCTA TCCGGTGCCC ACACATTGGG ACGCGGACGT
TGCGTGAAAG TGTGGAACCG TTTGTACAAT TTTACCGGAG TTGACGATCT CACGGATCCA TCCATGGATC CGACCTTCGC CGACGAGCTT AAGGTTAAAT GCCCCAAGGA CAACACGGGC
ACGTTCATTA TGATGGACAC CACCGACGGA ACATTCGACA ACGTGTACTA CCAGGACGTG GGAAGCAAGA AAGGATTGTT CGAATCCGAT GCAGCACTCC TCCAGAACCC CATCGGCTCG
AACCTTGTGA CATCTGTATC CACCAACCAG AGCTCTTTCT TCGACGCCTT CGCCCTGTCG ATGGTGAAGA TGGGCAAAAT CGATCTGAAA CTCGGAACTC AAGGAGAGGT TCGTCGGAAA
TGTGCCGTCA GCAACCCATC GAGACACCCG AGGGCATATT CAGCCTGA
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Retrieve as FASTA
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