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Entry information : AhalPrx20 (Araha.15684s0005)
Entry ID 14801
Creation 2018-01-09 (Christophe Dunand)
Last sequence changes 2018-01-09 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2018-01-10 (Christophe Dunand)
Peroxidase information: AhalPrx20 (Araha.15684s0005)
Name (synonym) AhalPrx20 (Araha.15684s0005)
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis halleri    [TaxId: 81970 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AhalPrx20
start..stop		 S start..stop
AtPrx08 200 1.41e-64 41..185 168..310
NoffPrx44-1A 198 5.18e-64 33..185 155..310
NoffPrx44-2A 198 7.1e-64 33..185 155..310
AlyPrx44-1 196 5.95e-63 42..185 169..310
Literature and cross-references AhalPrx20 (Araha.15684s0005)
Protein sequence: AhalPrx20 (Araha.15684s0005)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   185
PWM (Da):   %s   20286.61  
PI (pH):   %s   10.4
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MLLSLSLQVT LDLQAVIGHR FALVVPSFLS KILWHTGIPM AFNAKGMTMV DMVALIGGGH SVGVAHCSLF QDRLKDPAMQ PTLKARLIKT CHGSPNDPSV FLDQTTPFRV NNLIYRQILK 
QRGILTIDQN LALEGSTTRG NVSRFASING VFRDKFVQAM QKMGEIGVLT GDSGEIRTNC RVFNS* 

Retrieve as FASTA  
Remarks artial sequence from genomic. 5'end (exon1 and 2) is missing due to N in the sequence.
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCTTCTCA GTCTGAGCCT CCAAGTTACC TTGGATTTGC AGGCCGTCAT CGGACATCGG TTCGCTCTGG TCGTCCCGAG TTTTTTATCC AAAATTTTAT GGCATACTGG CATCCCTATG  GCATTTAATG CTAAAGGTAT GACTATGGTA GACATGGTTG CACTTATTGG TGGTGGCCAC AGCGTTGGTG TTGCACATTG CAGTCTTTTT CAGGATAGGC TTAAGGATCC TGCAATGCAA  CCCACACTAA AAGCTAGGTT AATAAAAACA TGTCATGGCA GCCCAAATGA CCCATCAGTG TTCTTGGACC AAACGACTCC ATTTAGAGTA AACAATTTAA TCTATAGACA GATATTAAAA  CAAAGAGGAA TCCTTACAAT TGATCAAAAC TTGGCTCTCG AAGGATCAAC GACCAGGGGG AATGTGTCAA GGTTTGCATC AATTAATGGA GTCTTCAGAG ATAAATTTGT CCAAGCAATG 
CAGAAAATGG GTGAAATAGG AGTTCTTACG GGAGATTCTG GAGAGATCAG GACAAACTGC AGAGTCTTCA ACAGTTGA 

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CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCTTCTCA GTCTGAGCCT CCAAGTTACC TTGGATTTGC AGGCCGTCAT CGGACATCGG TTCGCTCTGG TCGTCCCGAG TTTTTTATCC AAAATTTTAT GGCATACTGG CATCCCTATG  GCATTTAATG CTAAAGGTAT GACTATGGTA GACATGGTTG CACTTATTGG TGGTGGCCAC AGCGTTGGTG TTGCACATTG CAGTCTTTTT CAGGATAGGC TTAAGGATCC TGCAATGCAA  CCCACACTAA AAGCTAGGTT AATAAAAACA TGTCATGGCA GCCCAAATGA CCCATCAGTG TTCTTGGACC AAACGACTCC ATTTAGAGTA AACAATTTAA TCTATAGACA GATATTAAAA  CAAAGAGGAA TCCTTACAAT TGATCAAAAC TTGGCTCTCG AAGGATCAAC GACCAGGGGG AATGTGTCAA GGTTTGCATC AATTAATGGA GTCTTCAGAG ATAAATTTGT CCAAGCAATG 
CAGAAAATGG GTGAAATAGG AGTTCTTACG GGAGATTCTG GAGAGATCAG GACAAACTGC AGAGTCTTCA ACAGTTGA 

Retrieve as FASTA  
cDNA►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGCTTCTCA GTCTGAGCCT CCAAGTTACC TTGGATTTGC AGGCCGTCAT CGGACATCGG TTCGCTCTGG TCGTCCCGAG TTTTTTATCC AAAATTTTAT GGCATACTGG CATCCCTATG  GCATTTAATG CTAAAGGTAT GACTATGGTA GACATGGTTG CACTTATTGG TGGTGGCCAC AGCGTTGGTG TTGCACATTG CAGTCTTTTT CAGGATAGGC TTAAGGATCC TGCAATGCAA  CCCACACTAA AAGCTAGGTT AATAAAAACA TGTCATGGCA GCCCAAATGA CCCATCAGTG TTCTTGGACC AAACGACTCC ATTTAGAGTA AACAATTTAA TCTATAGACA GATATTAAAA  CAAAGAGGAA TCCTTACAAT TGATCAAAAC TTGGCTCTCG AAGGATCAAC GACCAGGGGG AATGTGTCAA GGTTTGCATC AATTAATGGA GTCTTCAGAG ATAAATTTGT CCAAGCAATG 
CAGAAAATGG GTGAAATAGG AGTTCTTACG GGAGATTCTG GAGAGATCAG GACAAACTGC AGAGTCTTCA ACAGTTGA 

Retrieve as FASTA