Entry information : HaPrx11 (HanXRQChr13g0389001)
Entry ID 1481
Creation 2005-08-11 (Christophe Dunand)
Last sequence changes 2016-04-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaPrx11 (HanXRQChr13g0389001)
Name (synonym) HaPrx11 (HanXRQChr13g0389001)
Class Class III peroxidase    [Orthogroup: Prx013]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type Mixed tissues
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaPrx11
start..stop
S start..stop
CiPrx02 585 0 1..321 1..321
HaPrx10 575 0 1..321 1..321
LsePrx23 544 0 1..321 1..321
HaPrx100 509 0 1..321 1..322
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1481' 'complement(join(12936500..12936882,12936976..12937141,12937814..12938005,12938944..12939168))' Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 12938944..12939168 223 N° 2 12937814..12938005 190 N° 3 12936976..12937141 164 N° 4 12936500..12936882 381
complement(join(12936500..12936882,12936976..12937141,12937814..12938005,1293894 4..12939168))


exon

Literature and cross-references HaPrx11 (HanXRQChr13g0389001)
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project Unpublished (2002).
DNA ref. HanXRQ genome:   HanXRQChr13 (12939168..12936500)
EST ref. GenBank:   BQ965760.1 [3' end]
Cluster/Prediction ref. HanXRQ:   HanXRQChr13g0389001
Protein sequence: HaPrx11 (HanXRQChr13g0389001)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   321 (293)
PWM (Da):   %s   34270.81 (31220.3)  
PI (pH):   %s   8.5 (8.41) Peptide Signal:   %s   cut: 29 range:29-321
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASSTFSSLFKLSTFTLCLLVLFAPSSGQLTANFYARTCPNFRSIITRAVNTAVANEARMGASLLRLHFHDCFVNGCDASVLLDDTANFTGEKTAGPNSNSIRGFNVIDTIKTQLERQCP
GVVSCADILAAAARDSVVALRGPGWNVLFGRRDSTTASLSAANSNLPSPTSSLSTLISSFSNQGFTANEMIALSGAHTIGQARCTTFRNRLYNENNINASFAAALRPNCPSSGGDNNLSP
LDSTATSFDNRYFNDLINQRGLLHSDQELFNGGSADAQVRTYSSNPATFNREFASAMVKMSNLGPLTGSSGQVRTNCRRTN*

Retrieve as FASTA  
Remarks Complete sequence from genomic and 2 ESTs. Cultivar="RHA801".
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCATCAACCTTTTCTTCTTTGTTTAAGCTCTCAACTTTTACATTATGTTTATTGGTTTTGTTTGCACCTAGTTCTGGTCAGCTAACTGCCAATTTCTATGCTAGAACGTGCCCA
AATTTCCGTTCTATTATAACTAGAGCTGTCAATACGGCTGTGGCAAATGAAGCTCGCATGGGAGCCTCGTTGCTTCGCCTTCATTTCCATGATTGCTTTGTTAAT
GCAAGTCTCTAACCT
TTTAACACCACTCTTCCCTCTCCGCTTGCATATTTATGATTTTTACTTACAGTCAAGTCACTATATTTAACTTGTGTCATGTTATATAATTCTGGTATTCTCACAATGTCAATGCAACAA
TTATTGCAGTCATCTGCACATTTTTTAGACATGCAAATGCATATTCTAAACTTGTTCACACTCATAAACGTGAACGTTATGGTTAAATATATGCATATATGAGGTTCAATGTGTATAAAA
AATCAAAACAATTTTTTCACTTGTATTAGTAGAAAAATCGATTTTACACTTATAAGCTATATAACGAACATGTTCCTTAAAAAGTGCACAGATAATTTTTTTTTTCCAATCAACTTTTTA
CATGTTTTCTTGCTTGTGTAATAATCAATATTATTTTTTTATGTTTTGTCAATCAAAACAATGGGTACATTTTTATAGTAAATCTTTATAAATTTTTATAGTTATGTACACTTATAATTC
TAACCATCTTACACATATTTATAAATAAAACAATTTAATAAAGTTATATATTTCGAATAGTGCGTAGAAAAGTTTGTTTGGTCATTACAAGAATCTTCTTCATAGATACTTTTGGACGAC
AAACTAATATTTAAAATGGTTTGAACATTTGTTTGCAAGTCAAAGATCCTAATTATTTTTGATATGACACTTATATCTAAATAATATTTTGCATGCCAAGTTGCGAACTATTGGCAGAAA
ACATATCCTATTGTGTTTGGTTTCGTGCTAGTTAATTAGAGAATTTTTATTTTGATTTGTATTTGACTTTGAATACATTATTGTCTTCTCTCACGGTGTTTACTTGTTCACTTTGATGTA
TGCTACAATGATTGAATTTCGTATCACCGTCTTCTTCACTGACTTATAAAAAAAAACTTTATTTTATTTGCATGAACGTGTAGGGGGATGTGATGCATCCGTGTTATTGGACGATACCGC
GAATTTCACCGGAGAAAAAACAGCAGGCCCGAATAGCAACTCGATTAGAGGTTTCAACGTCATCGATACAATCAAAACCCAATTGGAGCGCCAGTGTCCTGGTGTTGTTTCTTGTGCGGA
TATATTAGCTGCGGCTGCTAGAGATTCCGTTGTGGCT
GTAAGTGACGCATACTTACTTTTCTTGATATTACATTAGGGCCCTACAAACAAAAGGGCCCTAATGTAAGTGAAGCATACTTA
GGGTAGGGGGTATAATGCTCGGTGAGTGGTGAGGGGAGTGGGAGTCACTGATCGGTGACTATACCCACTTGATGAACTTGATCCGGTGAGTTGGAGAGAGGTGAGCAAAATCGGTGTAAA
GTCACTGAATGATGGAGGAGAGACAGAGAGGAGAGAGGAACCAATCAAAAAATATATAACTCAAACACCCTAGGGTGATTAACCATACCCCCTGATTGAGTGCAAAATGGGGAGTGGAAT
GAGGAGTTGACATGGCATAATATTATTGGGTAGGATTTCACTCAATCACCCTAGAGTGATTAACCATACCCTCCACCCTTACTAATCCTACGACACCCTTAAACTCAAATATGCCACCCA
CAAACTAAAAGGGCCGTTTGATCAAAAAGTTAAACAATCATTTAAAGGCATGAGGTTATGACTCAATCCCTAACCTTCAAACAGCCGTTCGGTGTAACTTAAATGGCTGTTTGAAAACGA
TGTGGGGTTATATTGTCAATGGTGTGCGTATAGTAGGCTCAACATGTGACTTTAAATCAAGAAAAAAATAAATAGATAATAAATTATTTTACTTTCATTTTTTTTCCAGCTCTTCGTGGG
CCTGGGTGGAACGTTTTGTTCGGAAGAAGGGACTCAACAACAGCAAGTTTAAGTGCTGCAAATTCTAATCTTCCTTCACCAACTTCTAGTCTTAGTACCCTCATTTCATCTTTTTCAAAC
CAAGGGTTTACTGCTAATGAAATGATAGCTCTATCAG
GTGAGTTACCTTAATATAACATTTTGGCTAACTAAGTACTGATGATTTATCAAAACCTTTTTTTAAGTAATAACGAATTCAAT
ATTAATGTAGGAGAGCTCATACAATTGGTCAAGCGAGGTGCACCACATTCCGTAATCGTCTCTACAATGAGAACAACATTAATGCATCGTTTGCTGCGGCATTGAGACCGAATTGTCCAT
CGAGTGGTGGTGACAACAATCTCTCACCACTAGACTCTACTGCTACATCTTTCGATAACCGATACTTTAATGATTTGATTAACCAAAGGGGATTACTGCATTCTGATCAAGAGTTGTTTA
ATGGAGGTTCGGCGGATGCACAAGTGAGGACCTATAGTTCGAATCCGGCTACTTTTAACCGTGAATTTGCAAGTGCAATGGTGAAGATGAGCAACCTTGGTCCATTAACAGGCTCAAGTG
GTCAAGTTAGGACCAATTGCAGAAGAACGAATTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCATCAACCTTTTCTTCTTTGTTTAAGCTCTCAACTTTTACATTATGTTTATTGGTTTTGTTTGCACCTAGTTCTGGTCAGCTAACTGCCAATTTCTATGCTAGAACGTGCCCA
AATTTCCGTTCTATTATAACTAGAGCTGTCAATACGGCTGTGGCAAATGAAGCTCGCATGGGAGCCTCGTTGCTTCGCCTTCATTTCCATGATTGCTTTGTTAAT
GGATGTGATGCATCC
GTGTTATTGGACGATACCGCGAATTTCACCGGAGAAAAAACAGCAGGCCCGAATAGCAACTCGATTAGAGGTTTCAACGTCATCGATACAATCAAAACCCAATTGGAGCGCCAGTGTCCT
GGTGTTGTTTCTTGTGCGGATATATTAGCTGCGGCTGCTAGAGATTCCGTTGTGGCT
CTTCGTGGGCCTGGGTGGAACGTTTTGTTCGGAAGAAGGGACTCAACAACAGCAAGTTTAAGT
GCTGCAAATTCTAATCTTCCTTCACCAACTTCTAGTCTTAGTACCCTCATTTCATCTTTTTCAAACCAAGGGTTTACTGCTAATGAAATGATAGCTCTATCAG
GAGCTCATACAATTGGT
CAAGCGAGGTGCACCACATTCCGTAATCGTCTCTACAATGAGAACAACATTAATGCATCGTTTGCTGCGGCATTGAGACCGAATTGTCCATCGAGTGGTGGTGACAACAATCTCTCACCA
CTAGACTCTACTGCTACATCTTTCGATAACCGATACTTTAATGATTTGATTAACCAAAGGGGATTACTGCATTCTGATCAAGAGTTGTTTAATGGAGGTTCGGCGGATGCACAAGTGAGG
ACCTATAGTTCGAATCCGGCTACTTTTAACCGTGAATTTGCAAGTGCAATGGTGAAGATGAGCAACCTTGGTCCATTAACAGGCTCAAGTGGTCAAGTTAGGACCAATTGCAGAAGAACG
AATTAA

Retrieve as FASTA