1. Browse the Database
  2. View Redoxidase
Entry information : StPrx01(Soltu.DM.11G011530)
Entry ID 1509
Creation 2006-09-15 (Christophe Dunand)
Last sequence changes 2006-09-15 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2021-10-28 (Christophe Dunand)
Peroxidase information: StPrx01(Soltu.DM.11G011530)
Name StPrx01(Soltu.DM.11G011530)
Class Class III peroxidase    [Orthogroup: Prx008]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Solanum tuberosum (Potato)    [TaxId: 4113 ]
Cellular localisation N/D
Tissue types Callus
Cell culture
Flower buds
Flowers
Leaves
Roots
Sprouting eyes
Stolons
Inducers Cold stress
Drought
Pathogen interaction
Phytophthora infection
Salt stress
Repressor N/D
Best BLASTp hits
Perox score E-value StPrx01
start..stop		 S start..stop
StPrx06 650 0 1..319 1..319
LePrx26 623 0 1..320 1..320
CanPrx02_hanbyul 615 0 1..319 1..322
NtPrx01-1A 597 0 4..319 5..324
Literature and cross-references StPrx01(Soltu.DM.11G011530)
Cluster/Prediction ref. UniGene:   Stu.20071
Protein sequence: StPrx01(Soltu.DM.11G011530)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   319 (295)
PWM (Da):   %s   34350.26 (31640.0)  
PI (pH):   %s   6.97 (6.88) Peptide Signal:   %s   cut: 25 range:25-319
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MTSSNNSFVA IFSLLLLSTM QCHAQLSSTF YDRTCPNALT TIRTSIRQAI SSERRMAASL IRLHFHDCFV QGCDASLLLD ETPTIVSEKT ALPNLGSVRG FGIIEDAKRE VEKTCPGVVS  CADILAVAAR DASSLVGGPS WTVKLGRRDS TTASHTLAET DLPGPFDPLS RLISGFANKG LSTRDMVALS GSHSIGQAQC FLFRDRIYGN GTDIDAGFAS TRRRQCPQED QNGNLAPLDL 
VTPNQLDNNY FKNLRQRKGL LQSDQVLLSG GSTDDIVLEY SNSPRAFASD FAAAMIKMGD ISPLTGQNGI IRTVCGAIN* 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from Phytozme, 19 first AA were not predicted.
DNA ►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACAAGTT CAAACAACTC TTTTGTTGCT ATATTTTCTC TTCTTCTACT CTCTACCATG CAATGCCATG CACAACTTTC TTCCACATTT TACGACCGAA CTTGCCCTAA TGCTCTCACC  ACTATTCGTA CAAGTATAAG ACAAGCAATT TCAAGCGAAC GTCGTATGGC TGCATCCCTC ATTCGTCTTC ATTTCCATGA TTGTTTTGTT CAGGTTGGAT ATATACATTA ATCTATATGT  TTATCGAACT ACTTTTAATT TATTGGTTTG ATGACATGCA TAATATATAT ACTAATACTA ATTATATATA ATTTGCGGCT TTAACTTTTA TAGGGTTGTG ATGCTTCTCT CTTGCTTGAT  GAAACCCCAA CGATTGTCAG CGAGAAGACT GCGCTGCCAA ATCTTGGATC AGTTAGAGGC TTTGGTATTA TAGAAGATGC AAAAAGAGAG GTTGAGAAAA CATGTCCTGG AGTTGTATCG  TGTGCTGACA TACTTGCAGT TGCTGCTAGA GATGCATCAA GTCTCGTAAG TACATTTCAC TTTTTCACAC TATGAAAAGA AGAAACTTTT TTTATTCTAA CCAATTAATG TTACGTTAAT  AAAAATCAGG TTGGCGGTCC ATCATGGACA GTGAAACTAG GAAGAAGAGA CTCAACCACT GCAAGTCATA CTCTTGCAGA AACTGATCTT CCTGGTCCTT TCGATCCTCT TAGTAGGCTT  ATTTCTGGCT TTGCCAACAA AGGCCTTAGC ACAAGGGATA TGGTTGCTTT ATCAGGTAAA ACTCGATCTA ATTATTGATA TCGATTATAT ATAGATTTGT ACATATTTAT AACAAGTTCT  AACTTTTTAA ATTTTCCGAT TAATTCTAGG ATCACATTCA ATTGGACAAG CACAATGCTT CCTTTTCCGT GATAGAATTT ATGGAAATGG AACAGACATC GATGCTGGAT TTGCTAGCAC  TAGAAGACGT CAATGTCCTC AAGAAGATCA AAATGGAAAC CTAGCTCCAC TTGATTTGGT AACACCTAAT CAATTGGATA ACAACTACTT CAAGAACTTG AGGCAAAGAA AAGGTCTTCT  TCAATCGGAT CAAGTTCTTT TGAGTGGAGG ATCTACCGAT GATATTGTTT TAGAATATAG CAATAGCCCT CGGGCATTTG CCTCTGACTT TGCTGCAGCC ATGATTAAAA TGGGAGATAT 
TAGTCCTCTA ACTGGTCAAA ATGGGATCAT AAGAACTGTT TGTGGAGCTA TAAATTGA 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGACAAGTT CAAACAACTC TTTTGTTGCT ATATTTTCTC TTCTTCTACT CTCTACCATG CAATGCCATG CACAACTTTC TTCCACATTT TACGACCGAA CTTGCCCTAA TGCTCTCACC  ACTATTCGTA CAAGTATAAG ACAAGCAATT TCAAGCGAAC GTCGTATGGC TGCATCCCTC ATTCGTCTTC ATTTCCATGA TTGTTTTGTT CAGGGTTGTG ATGCTTCTCT CTTGCTTGAT  GAAACCCCAA CGATTGTCAG CGAGAAGACT GCGCTGCCAA ATCTTGGATC AGTTAGAGGC TTTGGTATTA TAGAAGATGC AAAAAGAGAG GTTGAGAAAA CATGTCCTGG AGTTGTATCG  TGTGCTGACA TACTTGCAGT TGCTGCTAGA GATGCATCAA GTCTCGTTGG CGGTCCATCA TGGACAGTGA AACTAGGAAG AAGAGACTCA ACCACTGCAA GTCATACTCT TGCAGAAACT  GATCTTCCTG GTCCTTTCGA TCCTCTTAGT AGGCTTATTT CTGGCTTTGC CAACAAAGGC CTTAGCACAA GGGATATGGT TGCTTTATCA GGATCACATT CAATTGGACA AGCACAATGC  TTCCTTTTCC GTGATAGAAT TTATGGAAAT GGAACAGACA TCGATGCTGG ATTTGCTAGC ACTAGAAGAC GTCAATGTCC TCAAGAAGAT CAAAATGGAA ACCTAGCTCC ACTTGATTTG  GTAACACCTA ATCAATTGGA TAACAACTAC TTCAAGAACT TGAGGCAAAG AAAAGGTCTT CTTCAATCGG ATCAAGTTCT TTTGAGTGGA GGATCTACCG ATGATATTGT TTTAGAATAT  AGCAATAGCC CTCGGGCATT TGCCTCTGAC TTTGCTGCAG CCATGATTAA AATGGGAGAT ATTAGTCCTC TAACTGGTCA AAATGGGATC ATAAGAACTG TTTGTGGAGC TATAAATTGA 

Retrieve as FASTA