Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
319 (295) |
PWM (Da): |
34333.32 (31737.1) |
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PI (pH): |
7.34 (7.31) |
Peptide Signal: |
cut: 25 range:25-319 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MTSSNNSFVA IFSLLLLSTM QCHAQLSSTF YDRTCPNALT TIRTSIRQAI SRERRMAASL IRLHFHDCFV QGCDASLLLD ETPTIVSEKT ALPNLGSVRG FGIIEDAKRE VEKTCPGIVS
CADILAVAAR DASTLVGGPS WTVKLGRRDS TTASHTLAET DLPGPFDPLS RLISGFANKG LSTRDMVALS GSHSIGQAQC FLFRDRIYGN GTDIDAGFAS TRRRQCPQED QNGNLAPLDL
VTPNQLDNNY FKNLRQRKGL LQSDQVLLSG GSTDDIVLEY SNSPRAFASD FAAAMIKMGD ISPLTGQNGI IRTVCGAIN
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic. Incorrect prediction from Phytozme, 19 first AA were not predicted. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACAAGTT CAAACAACTC TTTTGTTGCT ATATTTTCTC TTCTTCTACT CTCTACCATG CAATGCCATG CACAACTTTC TTCCACATTC TACGACCGAA CTTGCCCTAA TGCTCTCACC
ACTATTCGTA CAAGTATAAG ACAAGCAATT TCAAGGGAAC GTCGTATGGC TGCATCCCTC ATTCGTCTTC ATTTCCATGA TTGTTTTGTT CAGGTTAGAT ATATACATTA ATCTATATGT
TTATTTATCT AAGTACTTCT ATTGGTTTGA TGACATGCAT AATATATACT AATTAGTTAT AAATAATTTG CGGCTTTAAC TTTTATAGGG TTGTGATGCT TCTCTCTTGC TTGATGAAAC
TCCAACGATT GTCAGCGAGA AGACTGCGCT GCCAAATCTT GGATCAGTTA GAGGCTTTGG TATTATAGAA GATGCAAAAA GAGAGGTTGA GAAAACATGT CCTGGAATTG TATCGTGTGC
TGACATACTT GCAGTTGCTG CTAGGGATGC ATCAACTCTC GTAAGTGAAT TTCACTTTTT CACACTACGA AAAGAAGAAA CTTTTTTATG CTCATAACTA TAGTTAGTAT TTTTTTTATT
CTAACCAATC AATGTTACGT TAATAACAAT CAGGTTGGCG GTCCATCATG GACAGTGAAA CTGGGAAGAA GAGACTCAAC CACTGCAAGT CATACTCTTG CAGAAACTGA TCTTCCCGGT
CCTTTCGATC CTCTTAGTAG GCTTATTTCT GGCTTTGCCA ACAAAGGCCT TAGCACAAGG GATATGGTTG CTTTATCAGG TAAGACTCGA TCTAATTATT GATATCGATT ATATATAGAT
TTGTACATAT TTATAACAAG TTCTAACTTT TTTAATTTTC CGATTAATTC TAGGATCACA TTCAATTGGA CAAGCACAAT GCTTCCTTTT CCGTGATAGA ATTTATGGAA ATGGAACAGA
CATCGATGCT GGATTTGCTA GCACTAGAAG ACGTCAATGT CCTCAAGAAG ATCAAAATGG AAACCTAGCT CCACTTGATT TGGTAACACC TAATCAATTG GATAACAACT ACTTCAAGAA
TTTGAGGCAA AGAAAAGGTC TTCTTCAATC AGATCAAGTT CTTTTGAGTG GAGGATCTAC CGATGATATT GTTTTAGAAT ATAGCAATAG CCCTCGGGCA TTTGCCTCTG ATTTTGCTGC
AGCCATGATT AAAATGGGAG ATATTAGTCC TCTAACTGGT CAAAATGGGA TCATAAGAAC TGTTTGTGGA GCTATAAATT GA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACAAGTT CAAACAACTC TTTTGTTGCT ATATTTTCTC TTCTTCTACT CTCTACCATG CAATGCCATG CACAACTTTC TTCCACATTC TACGACCGAA CTTGCCCTAA TGCTCTCACC
ACTATTCGTA CAAGTATAAG ACAAGCAATT TCAAGGGAAC GTCGTATGGC TGCATCCCTC ATTCGTCTTC ATTTCCATGA TTGTTTTGTT CAGGGTTGTG ATGCTTCTCT CTTGCTTGAT
GAAACTCCAA CGATTGTCAG CGAGAAGACT GCGCTGCCAA ATCTTGGATC AGTTAGAGGC TTTGGTATTA TAGAAGATGC AAAAAGAGAG GTTGAGAAAA CATGTCCTGG AATTGTATCG
TGTGCTGACA TACTTGCAGT TGCTGCTAGG GATGCATCAA CTCTCGTTGG CGGTCCATCA TGGACAGTGA AACTGGGAAG AAGAGACTCA ACCACTGCAA GTCATACTCT TGCAGAAACT
GATCTTCCCG GTCCTTTCGA TCCTCTTAGT AGGCTTATTT CTGGCTTTGC CAACAAAGGC CTTAGCACAA GGGATATGGT TGCTTTATCA GGATCACATT CAATTGGACA AGCACAATGC
TTCCTTTTCC GTGATAGAAT TTATGGAAAT GGAACAGACA TCGATGCTGG ATTTGCTAGC ACTAGAAGAC GTCAATGTCC TCAAGAAGAT CAAAATGGAA ACCTAGCTCC ACTTGATTTG
GTAACACCTA ATCAATTGGA TAACAACTAC TTCAAGAATT TGAGGCAAAG AAAAGGTCTT CTTCAATCAG ATCAAGTTCT TTTGAGTGGA GGATCTACCG ATGATATTGT TTTAGAATAT
AGCAATAGCC CTCGGGCATT TGCCTCTGAT TTTGCTGCAG CCATGATTAA AATGGGAGAT ATTAGTCCTC TAACTGGTCA AAATGGGATC ATAAGAACTG TTTGTGGAGC TATAAATTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACAAGTT CAAACAACTC TTTTGTTGCT ATATTTTCTC TTCTTCTACT CTCTACCATG CAATGCCATG CACAACTTTC TTCCACATTC TACGACCGAA CTTGCCCTAA TGCTCTCACC
ACTATTCGTA CAAGTATAAG ACAAGCAATT TCAAGGGAAC GTCGTATGGC TGCATCCCTC ATTCGTCTTC ATTTCCATGA TTGTTTTGTT CAGGGTTGTG ATGCTTCTCT CTTGCTTGAT
GAAACTCCAA CGATTGTCAG CGAGAAGACT GCGCTGCCAA ATCTTGGATC AGTTAGAGGC TTTGGTATTA TAGAAGATGC AAAAAGAGAG GTTGAGAAAA CATGTCCTGG AATTGTATCG
TGTGCTGACA TACTTGCAGT TGCTGCTAGG GATGCATCAA CTCTCGTTGG CGGTCCATCA TGGACAGTGA AACTGGGAAG AAGAGACTCA ACCACTGCAA GTCATACTCT TGCAGAAACT
GATCTTCCCG GTCCTTTCGA TCCTCTTAGT AGGCTTATTT CTGGCTTTGC CAACAAAGGC CTTAGCACAA GGGATATGGT TGCTTTATCA GGATCACATT CAATTGGACA AGCACAATGC
TTCCTTTTCC GTGATAGAAT TTATGGAAAT GGAACAGACA TCGATGCTGG ATTTGCTAGC ACTAGAAGAC GTCAATGTCC TCAAGAAGAT CAAAATGGAA ACCTAGCTCC ACTTGATTTG
GTAACACCTA ATCAATTGGA TAACAACTAC TTCAAGAATT TGAGGCAAAG AAAAGGTCTT CTTCAATCAG ATCAAGTTCT TTTGAGTGGA GGATCTACCG ATGATATTGT TTTAGAATAT
AGCAATAGCC CTCGGGCATT TGCCTCTGAT TTTGCTGCAG CCATGATTAA AATGGGAGAT ATTAGTCCTC TAACTGGTCA AAATGGGATC ATAAGAACTG TTTGTGGAGC TATAAATTGA
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Retrieve as FASTA
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