Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
313 |
PWM (Da): |
33192.36 |
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PI (pH): |
8.86 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MSMPKVMPLV DYGSRSLWRL LQYPEISRPG RHCASPLVRL NLLDASYVPA LAASPPTACH PRPSLRTFES LADMASATKS LVAGAPVALN LCRSALECSA KQQPMLLGAG RVGKRAIELS
AVRSLSFGAF MSSRALNSQK RAFSLSTAIK ATIQVGEKLP EAELSYLDQE NNVQTVTISE LTKGKKIVVF AVPGAFTPTC SQKHVPGFVE KSDELKAKGV DTIACVSVND VFVMKAWGEG
LGVGDKVLLL SDGNGHFTKA LGCELDLSDK PVGLGVRSRR YALLADDGVV KQLNLEEGGA FSISGPDEIL KAL
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic and RNA seq (isotig27546) |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTCGATGC CAAAGGTCAT GCCACTCGTC GACTATGGTA GTCGATCGCT CTGGCGCCTT CTGCAGTACC CCGAGATCTC TCGTCCCGGT CGCCACTGCG CCTCGCCCCT TGTCCGATTA
AATCTTCTCG ACGCGTCTTA TGTACCTGCG CTCGCTGCAT CTCCTCCCAC AGCTTGTCAC CCTCGTCCCT CGTTGCGCAC ATTTGAATCG TTGGCAGATA TGGCGTCTGC AACGAAATCC
CTCGTCGCTG GTGCCCCCGT CGCACTGAAC CTGTGCAGGA GCGCTTTGGA ATGCTCCGCG AAGCAGCAGC CGATGCTTCT TGGTGCCGGT CGTGTCGGCA AGAGGGCAAT TGAATTGTCC
GCTGTCAGAA GTCTGAGCTT CGGGGCTTTT ATGTCCTCCA GAGCGCTGAA TTCTCAGAAG AGGGCGTTTT CCTTGTCAAC TGCCATCAAG GCCACCATCC AGGTTGGAGA AAAGCTGCCC
GAGGCCGAGC TCTCGTACCT AGACCAGGAG AACAATGTGC AGACTGTGAC GATTTCGGAG CTCACCAAGG GCAAGAAAAT TGTGGTGTTC GCAGTGCCCG GAGCTTTCAC CCCCACCTGC
TCCCAGAAGC ACGTGCCCGG GTTCGTCGAG AAGTCTGATG AGCTCAAGGC CAAGGGCGTG GATACCATCG CCTGTGTCAG CGTGAACGAT GTTTTCGTCA TGAAGGCATG GGGAGAGGGT
CTTGGCGTCG GAGACAAGGT GTTGCTGCTC TCTGATGGGA ACGGTCATTT CACCAAGGCC TTGGGTTGCG AGTTAGACTT GAGCGACAAG CCCGTGGGTC TTGGAGTGAG ATCGAGACGT
TATGCCCTTT TGGCCGATGA TGGCGTGGTG AAGCAGTTGA ATCTTGAGGA GGGCGGAGCT TTTTCCATCA GTGGCCCTGA TGAAATTCTT AAGGCTTTGT AA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTCGATGC CAAAGGTCAT GCCACTCGTC GACTATGGTA GTCGATCGCT CTGGCGCCTT CTGCAGTACC CCGAGATCTC TCGTCCCGGT CGCCACTGCG CCTCGCCCCT TGTCCGATTA
AATCTTCTCG ACGCGTCTTA TGTACCTGCG CTCGCTGCAT CTCCTCCCAC AGCTTGTCAC CCTCGTCCCT CGTTGCGCAC ATTTGAATCG TTGGCAGATA TGGCGTCTGC AACGAAATCC
CTCGTCGCTG GTGCCCCCGT CGCACTGAAC CTGTGCAGGA GCGCTTTGGA ATGCTCCGCG AAGCAGCAGC CGATGCTTCT TGGTGCCGGT CGTGTCGGCA AGAGGGCAAT TGAATTGTCC
GCTGTCAGAA GTCTGAGCTT CGGGGCTTTT ATGTCCTCCA GAGCGCTGAA TTCTCAGAAG AGGGCGTTTT CCTTGTCAAC TGCCATCAAG GCCACCATCC AGGTTGGAGA AAAGCTGCCC
GAGGCCGAGC TCTCGTACCT AGACCAGGAG AACAATGTGC AGACTGTGAC GATTTCGGAG CTCACCAAGG GCAAGAAAAT TGTGGTGTTC GCAGTGCCCG GAGCTTTCAC CCCCACCTGC
TCCCAGAAGC ACGTGCCCGG GTTCGTCGAG AAGTCTGATG AGCTCAAGGC CAAGGGCGTG GATACCATCG CCTGTGTCAG CGTGAACGAT GTTTTCGTCA TGAAGGCATG GGGAGAGGGT
CTTGGCGTCG GAGACAAGGT GTTGCTGCTC TCTGATGGGA ACGGTCATTT CACCAAGGCC TTGGGTTGCG AGTTAGACTT GAGCGACAAG CCCGTGGGTC TTGGAGTGAG ATCGAGACGT
TATGCCCTTT TGGCCGATGA TGGCGTGGTG AAGCAGTTGA ATCTTGAGGA GGGCGGAGCT TTTTCCATCA GTGGCCCTGA TGAAATTCTT AAGGCTTTGT AA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTCGATGC CAAAGGTCAT GCCACTCGTC GACTATGGTA GTCGATCGCT CTGGCGCCTT CTGCAGTACC CCGAGATCTC TCGTCCCGGT CGCCACTGCG CCTCGCCCCT TGTCCGATTA
AATCTTCTCG ACGCGTCTTA TGTACCTGCG CTCGCTGCAT CTCCTCCCAC AGCTTGTCAC CCTCGTCCCT CGTTGCGCAC ATTTGAATCG TTGGCAGATA TGGCGTCTGC AACGAAATCC
CTCGTCGCTG GTGCCCCCGT CGCACTGAAC CTGTGCAGGA GCGCTTTGGA ATGCTCCGCG AAGCAGCAGC CGATGCTTCT TGGTGCCGGT CGTGTCGGCA AGAGGGCAAT TGAATTGTCC
GCTGTCAGAA GTCTGAGCTT CGGGGCTTTT ATGTCCTCCA GAGCGCTGAA TTCTCAGAAG AGGGCGTTTT CCTTGTCAAC TGCCATCAAG GCCACCATCC AGGTTGGAGA AAAGCTGCCC
GAGGCCGAGC TCTCGTACCT AGACCAGGAG AACAATGTGC AGACTGTGAC GATTTCGGAG CTCACCAAGG GCAAGAAAAT TGTGGTGTTC GCAGTGCCCG GAGCTTTCAC CCCCACCTGC
TCCCAGAAGC ACGTGCCCGG GTTCGTCGAG AAGTCTGATG AGCTCAAGGC CAAGGGCGTG GATACCATCG CCTGTGTCAG CGTGAACGAT GTTTTCGTCA TGAAGGCATG GGGAGAGGGT
CTTGGCGTCG GAGACAAGGT GTTGCTGCTC TCTGATGGGA ACGGTCATTT CACCAAGGCC TTGGGTTGCG AGTTAGACTT GAGCGACAAG CCCGTGGGTC TTGGAGTGAG ATCGAGACGT
TATGCCCTTT TGGCCGATGA TGGCGTGGTG AAGCAGTTGA ATCTTGAGGA GGGCGGAGCT TTTTCCATCA GTGGCCCTGA TGAAATTCTT AAGGCTTTGT AAGAAAAGAA ACTATCCTGC
GCCTTCTTGT TACATACCTG CAAATGTTTT CTGAGAAACT ATGTGCAAAA TTTTGATGTC TTCGCACTGG TTCCATGTCT GCCGTCCAAG AACAAGGAGC TGGAGTTAGT CAGTTGCCCG
TGTCAGATCT CTCTTCTTGG GTTGGCCCAC AGTGGCAATT TGATCGGCTC TCGGAGGACG TGAATGTACT ATGAAATTGC TGATAGAGTT TAGTCTTGTC ATAGAGATAT GTCGACAATC
AAGGAAGGAC CTTAATTGTT CAATTTCCAA ACACGGAATG CAATAAGAAA AAGTTCTATG GTCGTTGGTT GCTGTTATCA GTGAGGATGA ATCTTTGCTG TTTTGGTTGG CCATGGTTGT
TGGAAAGTTT GAATATCTCA CTCTTTCTGA AGGAAGTATC GGTCAGTGCT GATAGTGAGT GGTGGGATAG TCTTGGATCA AAGTTATTTC TGAGTGACTT CATACGTGAC ACCTATGTTT
CTACTCTATT AGAACTGTCA TCGCATGGAT GGAATGGAAC ACGTAGAGGA TGGATAGGAA CTCTGAATCT TTCAAGAACC AAATGTCTTT CAAATAACTG TCACAAGAAG CAGTCTTTAC
TTGTACTAGG CAGTTCACTA GGGTTAGCTC TGATAGCAAT GTAAATATGG TACAAAAAAA TTAATTCTAA TTTGGTTTTA TACAATTATT GTGAAATGCA CCAAGGTCGT GAACAGTACC
ATCTTCCGAT TTAGCTCACG TCTTTCCGCC AGCGTGTTTT GGTCCTCCAA AAACGTTGTG ACTTCAGGTT ACCAAAACGT CTAATGTAAG TCGTTACGGA AAAGGTGACG GTACGTTGTT
GCACTCTATG ATCCATGCTT GTATAGTGTC GTAAATCCTT GTGAAACAGT CAATCAAAAT TCTTCTGATG CGATATGTTG TTTGTGTTTA ATTTTGTTCG TCATCTAATC TCAGTTTGTT
GTGTAGTACG ACCCCCCCGA TTTCTATTTA A
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Retrieve as FASTA
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