Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
399 (380) |
| PWM (Da): |
42661.68 (40595.6) |
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| PI (pH): |
6.66 (6.50) |
Peptide Signal: |
cut: 20 range:20-399 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MLKLFPSLVC LAVATTCSGV NIKHVNCPDG VHVASDAACC PFFALRDDLQ KNLFNNECGV DAREALRLSF LDAIAHSLSL KRLGKPHGGG ADGSMLTFPC VEPYYAANSG ISDIVDALLP
FLASHPVSAG DLIQFAAAVG ISNCVGAPRL HFKAGRPQAM SPAPEGLTPE PQDSVTEILA RFADSGGFSP DEVVALLAAH SIAISDHVDS TIKDAPFDST PYAFDTQIHL EMLLREREYL
GSTNSTRDVA SPLPFASGDL SGVLRLRSDY AIARDARTAC QWQGFINKQT EMTRAFKVAM AKLAVVGQDT TDFVDCSEAV PVPVSTSVKH TTYPLSKTER DVEQFCKAPF PKLSASGSGS
GSMLLQLISN KLIKAKERIL KSRVGSIVLS TLQAQLRFM*
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Retrieve as FASTA
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| Remarks |
fgenesh2_kg.214_#_10_#_Locus11571v1rpkm9.81 Ramac1 |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCTCAAGT TGTTCCCATC ACTTGTATGT CTCGCTGTCG CCACTACCTG CAGTGGGGTC AACATTAAAC ACGTAAACTG TCCTGACGGT GTGCACGTCG CTTCTGACGC TGCTTGTTGC
CCTTTCTTTG CCCTCCGTGA TGATCTTCAA AAAAATCTGT AGGTAAAATC TTTCGTGAGT CCGAGTTCTC ATGATTTATA TATAATCCGA GGGATCAGGT TCAACAATGA ATGTGGCGTG
GATGCACGCG AGGCTCTTCG CCTTAGTTTT CGTAAGTTAT GCTTCGATCC AAATTACACT GTCAACTGTT TTATTTCCTT CTTAGTCGAC GCCATTGCGC ACTCATTGTC TCTGAAGCGA
CTGGGAAAGC CTCATGGTGG GGGAGCTGAC GGTTCTATGC TCACATTTCC CTGCGTTGAA CCCTACTACG CTGCAAATAG TGGCATCTCC GATATCGTTG ATGCCCTTCT TCCTTTCTTA
GCCTCTCATC CTGTGAGCGC CGGAGATCTC ATCCAATTCG CCGCTGCTGT AGGGATATCG AATTGTGTAG GAGCTCCCAG GTTGCATTTC AAGGCCGGGC GACCTCAGGC TATGTCCCCC
GCTCCCGAGG GTCTGACCCC AGAGCCCCAA GACTCGGTCA CTGAGATACT CGCTCGCTTT GCTGACAGTG GGGGATTCTC CCCCGACGAG GTTGTCGCAT TGCTCGCCGC GCACTCCATT
GCTATTTCGG ACCATGTCGA CTCTACGATC AAGGATGCTC CCTTTGACTC GACGCCCTAT GCATTCGACA CACAGATTCA CTTGGAAATG CTATTACGGG AGAGGGAGTA TCTAGGATCG
ACGAACAGCA CACGTAACCG CTATCGGTCT CATTTAATTT CTTCTAACCA ACCTGTGTTT TATAGGGGAT GTCGCGTCTC CTCTTCCTTT CGCTTCAGGT GATCTATCTG GGGTGTTGCG
TCTCCGTTCA GATTACGCTA TTGCTCGTGA CGCACGCACT GCGTGTCAAT GGCAAGGGTT TATCAACAAG CAGACCGAGA TGACCAGAGC CTTCAAAGTC GCGATGGCAA AACTTGCAGT
AGTGGGTCAG GATACAACCG ACTTCGTCGA TTGCTCCGAG GCAGTGCCAG TGCCTGTTTC TACTTCTGTG AAGCACACAA CGTACGCCCA ACTGGCATGC CTTCTCCGTG CAAGTGATAA
TAGCACTCGA CTTATAGGTA CCCCCTCTCT AAGACAGAAA GAGACGTAGA ACAATTCTGT AAGGCTCCTT TCCCCAAGCT CAGTGCCAGT GGAAGTGGTT CGGGTTCGAT GCTTCTGTAA
GCCAGACTTC TATTCGCACT CCTCTTGAGC TATCCTGACC TTTGCTCCAA CGTAGACAAT TAATTTCCAA CAAGCTGATC AAGGCAAAGG AGAGAATACT CAAAAGCCGT GTAGGAAGCA
TAGTATTATC GACGTTGCAG GCCCAACTGC GCTTTATGTA A
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
| ATGCTCAAGT TGTTCCCATC ACTTGTATGT CTCGCTGTCG CCACTACCTG CAGTGGGGTC AACATTAAAC ACGTAAACTG TCCTGACGGT GTGCACGTCG CTTCTGACGC TGCTTGTTGC
CCTTTCTTTG CCCTCCGTGA TGATCTTCAA AAAAATCTGT TTAACAATGA ATGTGGCGTG GATGCACGCG AGGCTCTTCG CCTTAGTTTT CTCGACGCCA TTGCGCACTC ATTGTCTCTG
AAGCGACTGG GAAAGCCTCA TGGTGGGGGA GCTGACGGTT CTATGCTCAC ATTTCCCTGC GTTGAACCCT ACTACGCTGC AAATAGTGGC ATCTCCGATA TCGTTGATGC CCTTCTTCCT
TTCTTAGCCT CTCATCCTGT GAGCGCCGGA GATCTCATCC AATTCGCCGC TGCTGTAGGG ATATCGAATT GTGTAGGAGC TCCCAGGTTG CATTTCAAGG CCGGGCGACC TCAGGCTATG
TCCCCCGCTC CCGAGGGTCT GACCCCAGAG CCCCAAGACT CGGTCACTGA GATACTCGCT CGCTTTGCTG ACAGTGGGGG ATTCTCCCCC GACGAGGTTG TCGCATTGCT CGCCGCGCAC
TCCATTGCTA TTTCGGACCA TGTCGACTCT ACGATCAAGG ATGCTCCCTT TGACTCGACG CCCTATGCAT TCGACACACA GATTCACTTG GAAATGCTAT TACGGGAGAG GGAGTATCTA
GGATCGACGA ACAGCACACG GGATGTCGCG TCTCCTCTTC CTTTCGCTTC AGGTGATCTA TCTGGGGTGT TGCGTCTCCG TTCAGATTAC GCTATTGCTC GTGACGCACG CACTGCGTGT
CAATGGCAAG GGTTTATCAA CAAGCAGACC GAGATGACCA GAGCCTTCAA AGTCGCGATG GCAAAACTTG CAGTAGTGGG TCAGGATACA ACCGACTTCG TCGATTGCTC CGAGGCAGTG
CCAGTGCCTG TTTCTACTTC TGTGAAGCAC ACAACGTACC CCCTCTCTAA GACAGAAAGA GACGTAGAAC AATTCTGTAA GGCTCCTTTC CCCAAGCTCA GTGCCAGTGG AAGTGGTTCG
GGTTCGATGC TTCTACAATT AATTTCCAAC AAGCTGATCA AGGCAAAGGA GAGAATACTC AAAAGCCGTG TAGGAAGCAT AGTATTATCG ACGTTGCAGG CCCAACTGCG CTTTATGTAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGAAGGTTGA GTTTGACGAT ACAATAACTT TCTAGGGATG TACTATAGAA CAGGTGGTGT CGAGTCGGAT CGACAGATTA CCCCACTGCT AGCACGTCTC CCTCATGCTC AAGTTGTTCC
CATCACTTGT ATGTCTCGCT GTCGCCACTA CCTGCAGTGG GGTCAACATT AAACACGTAA ACTGTCCTGA CGGTGTGCAC GTCGCTTCTG ACGCTGCTTG TTGCCCTTTC TTTGCCCTCC
GTGATGATCT TCAAAAAAAT CTGTTTAACA ATGAATGTGG CGTGGATGCA CGCGAGGCTC TTCGCCTTAG TTTTCTCGAC GCCATTGCGC ACTCATTGTC TCTGAAGCGA CTGGGAAAGC
CTCATGGTGG GGGAGCTGAC GGTTCTATGC TCACATTTCC CTGCGTTGAA CCCTACTACG CTGCAAATAG TGGCATCTCC GATATCGTTG ATGCCCTTCT TCCTTTCTTA GCCTCTCATC
CTGTGAGCGC CGGAGATCTC ATCCAATTCG CCGCTGCTGT AGGGATATCG AATTGTGTAG GAGCTCCCAG GTTGCATTTC AAGGCCGGGC GACCTCAGGC TATGTCCCCC GCTCCCGAGG
GTCTGACCCC AGAGCCCCAA GACTCGGTCA CTGAGATACT CGCTCGCTTT GCTGACAGTG GGGGATTCTC CCCCGACGAG GTTGTCGCAT TGCTCGCCGC GCACTCCATT GCTATTTCGG
ACCATGTCGA CTCTACGATC AAGGATGCTC CCTTTGACTC GACGCCCTAT GCATTCGACA CACAGATTCA CTTGGAAATG CTATTACGGG AGAGGGAGTA TCTAGGATCG ACGAACAGCA
CACGGGATGT CGCGTCTCCT CTTCCTTTCG CTTCAGGTGA TCTATCTGGG GTGTTGCGTC TCCGTTCAGA TTACGCTATT GCTCGTGACG CACGCACTGC GTGTCAATGG CAAGGGTTTA
TCAACAAGCA GACCGAGATG ACCAGAGCCT TCAAAGTCGC GATGGCAAAA CTTGCAGTAG TGGGTCAGGA TACAACCGAC TTCGTCGATT GCTCCGAGGC AGTGCCAGTG CCTGTTTCTA
CTTCTGTGAA GCACACAACG TACCCCCTCT CTAAGACAGA AAGAGACGTA GAACAATTCT GTAAGGCTCC TTTCCCCAAG CTCAGTGCCA GTGGAAGTGG TTCGGGTTCG ATGCTTCTAC
AATTAATTTC CAACAAGCTG ATCAAGGCAA AGGAGAGAAT ACTCAAAAGC CGTGTAGGAA GCATAGTATT ATCGACGTTG CAGGCCCAAC TGCGCTTTAT GTAAGATGCC GTGATTGCTT
TCAAAGTCGC CTGGGAAGCT TTTCAACTTG TATGGCTTTG CAAGCTAATC AGTGCTATGC ATGTACAACT CGGCGGATGC TGTGGCAGTT TGCCAGTGAT GCACAGATAA ACTTGAAGAG
ACGTGGGCTA ATGTTGTCTT TCGACGACTA ACTGAACAAA ACTACATAAA AAAGCACTTT AGGAATTTCA ACGATTT
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Retrieve as FASTA
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