Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
361 (335) |
PWM (Da): |
38845.84 (36319.4) |
Transmb domain: |
i7-29o |
PI (pH): |
8.2 (7.97) |
Peptide Signal: |
cut: 27 range:27-361 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MAMMGRLAVL SVAVVVALSL ATTVAAARVE LEQFAPSVNF GANLSSLEQQ LPLEAGLVWG YYSKSCPKAE SIVTQKVSEA IRKDPGIAPG LLRIFFHDCF VKGCDASILL RNSRGSELND
IPNRTIRQSA LNLIDQIKTA LEQACKGVVS CADIVVLAGR DSVKLAGGPA FNVPLGRLDS FTIFPTNALP TPFASFNDQL NGFKAVGLNT QDLVALASGG HTLGISQCAS FQARIFPNLD
PKLNKDFGNA LRQMCGSSSN TVGIDFFTPN KFDNQIYKNF LSGGALLLSD QNMDTDSTAW NLVKTWANNQ GAFFNQFQTS FIKMSQINTL SGRAGEVRRV CTKPNNMAQE FEPEIKLVTD
V
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic (3 introns, contig_2597:31173-32991) and RNA seq (isotig27914) |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCATGA TGGGAAGACT GGCAGTGCTC AGCGTGGCGG TGGTGGTGGC ATTGTCACTG GCGACGACAG TTGCTGCTGC CAGAGTTGAG CTGGAGCAGT TTGCACCGAG TGTCAATTTT
GGAGCCAATC TCTCGAGCTT GGAACAGCAG CTCCCTCTCG AGGCAGGCCT TGTATGGGGA TATTACTCCA AGAGCTGCCC GAAGGCCGAG TCAATCGTCA CACAGAAGGT CTCCGAGGCA
ATCCGGAAGG ATCCCGGCAT TGCTCCAGGT TTGCTGCGTA TCTTCTTCCA CGACTGCTTC GTCAAGGTGA GCTCCTCTCA CCAGTTTTCC TCAAAGCGTA GAGATGAACT TCCTCGAGCT
TGATTATTTA GCTTTGACGC TTGCCATTAA TGCATGCATT GTATGGATTT ATTGGCGAGT AAGCCATGGC CAACCAAGTA CAGCGATGGG CATTTCGGTT CCAGAATCTC AGCACATCCT
TGGAGGGCGA CCAGTTGATC ACCATTCTCG AGATCTTGAT ACATCCGGAG TCTAGGACAG CCTGTTAGAG AAGAGTGAGT AGATTCCTGG GTAGAAGAAG TTGGAATTAT CATCACCTGC
GAGATCACCC CCTTTCTGAA AAATGGTTTA GTGTTTTCAG TGAAGGATTG ATTCTGGAAG TATCGTAGAA ATCCTGAGAG ATGAAATGTA ATGTACGATG TTTCAGGGAT GCGATGCATC
GATCCTTTTG AGGAACTCGA GGGGTTCTGA GCTGAACGAT ATTCCGAACA GAACCATCCG ACAAAGTGCT CTGAATTTGA TCGACCAGAT CAAGACAGCA CTCGAGCAGG CGTGCAAAGG
AGTCGTCTCC TGCGCAGACA TCGTCGTTCT GGCCGGTCGT GACAGCGTGA AGCTGGTAAC AAACACTTGC ATTCCCTTGT CCAGAGCCTG TGTGAATGCC ATGAGGTCTT CCTCCTCGAT
CCACTCGATT CTGATCTGCA GTTCTCTGCA TACCCCCCCT CACCACCGAT TTCCATCTCC TGGATTCTGC AGGCTGGAGG ACCTGCATTC AACGTTCCTC TCGGGCGTCT CGACTCTTTC
ACAATCTTCC CCACCAACGC CCTGCCTACT CCATTCGCCA GCTTCAACGA CCAGCTCAAT GGCTTCAAGG CTGTCGGCTT GAACACGCAG GATCTCGTGG CTCTTGCATG TATGTGCAGC
AAATTTCATC TCTAGCGATC AGGATGACAG AAGCGCAGTG TAAATCTTAA GTTTCAGCTG AATGTGGGAA TTCTACCTCT ACCTCTACCT CTGCCAGCAT TCAGTAGCTG GACTTGGCAG
GAATTCCAGC TCCAAGTTAT GGAAACTGAC TCTCTTGTTC AAATGTCCTT TGTTGTGAAT GCAGCTGGAG GACACACCCT TGGAATTTCC CAGTGCGCAT CATTCCAGGC CCGCATCTTC
CCCAACTTGG ACCCCAAGCT GAACAAGGAC TTCGGCAACG CCCTGAGGCA GATGTGCGGG AGCAGCAGCA ACACCGTGGG CATCGACTTC TTCACCCCCA ACAAGTTCGA CAACCAGATC
TACAAGAACT TCCTGAGCGG AGGAGCGCTG CTGCTCTCGG ATCAGAACAT GGACACGGAC TCCACGGCCT GGAATCTGGT GAAGACGTGG GCCAACAACC AGGGAGCATT TTTCAACCAG
TTCCAAACCT CCTTCATCAA GATGAGCCAA ATCAACACTC TCTCCGGAAG GGCGGGAGAG GTCCGCAGAG TGTGCACGAA GCCCAACAAC ATGGCCCAAG AATTCGAGCC AGAAATCAAG
CTGGTTACCG ATGTGTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCATGA TGGGAAGACT GGCAGTGCTC AGCGTGGCGG TGGTGGTGGC ATTGTCACTG GCGACGACAG TTGCTGCTGC CAGAGTTGAG CTGGAGCAGT TTGCACCGAG TGTCAATTTT
GGAGCCAATC TCTCGAGCTT GGAACAGCAG CTCCCTCTCG AGGCAGGCCT TGTATGGGGA TATTACTCCA AGAGCTGCCC GAAGGCCGAG TCAATCGTCA CACAGAAGGT CTCCGAGGCA
ATCCGGAAGG ATCCCGGCAT TGCTCCAGGT TTGCTGCGTA TCTTCTTCCA CGACTGCTTC GTCAAGGGAT GCGATGCATC GATCCTTTTG AGGAACTCGA GGGGTTCTGA GCTGAACGAT
ATTCCGAACA GAACCATCCG ACAAAGTGCT CTGAATTTGA TCGACCAGAT CAAGACAGCA CTCGAGCAGG CGTGCAAAGG AGTCGTCTCC TGCGCAGACA TCGTCGTTCT GGCCGGTCGT
GACAGCGTGA AGCTGGCTGG AGGACCTGCA TTCAACGTTC CTCTCGGGCG TCTCGACTCT TTCACAATCT TCCCCACCAA CGCCCTGCCT ACTCCATTCG CCAGCTTCAA CGACCAGCTC
AATGGCTTCA AGGCTGTCGG CTTGAACACG CAGGATCTCG TGGCTCTTGC ATCTGGAGGA CACACCCTTG GAATTTCCCA GTGCGCATCA TTCCAGGCCC GCATCTTCCC CAACTTGGAC
CCCAAGCTGA ACAAGGACTT CGGCAACGCC CTGAGGCAGA TGTGCGGGAG CAGCAGCAAC ACCGTGGGCA TCGACTTCTT CACCCCCAAC AAGTTCGACA ACCAGATCTA CAAGAACTTC
CTGAGCGGAG GAGCGCTGCT GCTCTCGGAT CAGAACATGG ACACGGACTC CACGGCCTGG AATCTGGTGA AGACGTGGGC CAACAACCAG GGAGCATTTT TCAACCAGTT CCAAACCTCC
TTCATCAAGA TGAGCCAAAT CAACACTCTC TCCGGAAGGG CGGGAGAGGT CCGCAGAGTG TGCACGAAGC CCAACAACAT GGCCCAAGAA TTCGAGCCAG AAATCAAGCT GGTTACCGAT
GTGTAG
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Retrieve as FASTA
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