Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
367 (348) |
PWM (Da): |
39344.02 (37329.9) |
Transmb domain: |
i5-27o (i5-27o) |
PI (pH): |
5.47 (5.90) |
Peptide Signal: |
cut: 27 range:20-367 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MGRVAALVSV FVALALCEAG LSVAFGGDLQ YAPNYGVELS ALERQVPVRD GLAWGYYAKS CPKAEDIVAQ RVAVFLKKDV GVSPGLLRLI FHDCFVQGCD GSILLRLESG TELDDPANRS
IRQVALDLVD DAKAALEKVC PGVVTCADIV VMAGRESVKQ VGGPAFNVPL GRRDSFTFSN DTSDLPPPTA TFQAQLDLYA TKNLDLADLV ALSGAHTLGD AGCGAFQNRL RPTVDPKLNK
VYAKYLTNLC PTNGATARTG LDFFSPTKFD NVYYKNFATG GALLTSDQEL DQNKQALGLV RLYASNQSAF FNQFLWSYIK MSQIVSSPPN TGEVRRKCSV NNGGKSSASS SIEPEIISMV
TDGRVDI*
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic and 10 ESTs. Specific peptide found in cell wall proteome + N-glycoproteome |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGGCGAG TCGCTGCATT GGTGTCGGTG TTCGTGGCCC TGGCGCTGTG CGAGGCCGGG CTCTCGGTGG CGTTCGGGGG CGACCTGCAG TATGCGCCGA ACTATGGAGT CGAGCTCTCG
GCGCTCGAGA GGCAAGTGCC CGTGCGCGAC GGCCTGGCCT GGGGCTACTA CGCCAAGTCG TGCCCCAAGG CCGAGGACAT CGTCGCCCAG CGCGTCGCTG TCTTCCTCAA GAAGGACGTC
GGCGTCTCGC CCGGCCTGCT GCGCCTCATC TTCCATGACT GCTTCGTTCA GGTTCCACCC GAAGTTGTTG TTGTCTCGTG GGTCCGGATG CTGGGCAGCT GCTCGGAGTT TGTGCATAAT
TTCGAGTGGG TGCGTGAGGG GCGTGATTCC GGGAGTGCTT CGAAGGCACT GATTGATTGA TTGCCTGTTT ACGTGCAGGG ATGTGATGGC TCGATCCTGC TGAGGCTGGA GTCCGGCACC
GAGCTCGACG ACCCTGCCAA CAGGTCCATC CGCCAGGTGG CCCTGGACCT CGTCGACGAT GCCAAGGCGG CCCTCGAGAA GGTGTGCCCG GGCGTCGTCA CGTGCGCCGA CATCGTCGTC
ATGGCCGGAC GCGAGAGCGT CAAGCAGGTG AGAACGACTG AGTTCGTCCG CTCAATCCCT CAGATTCATA CACTCGATCC GATCCACCCA GCTCACACTC CTCGGCCCTG TGCTGTTCGT
GCAGGTCGGA GGCCCCGCTT TCAATGTGCC CCTGGGACGT CGCGACTCCT TCACCTTCAG CAACGATACG AGCGACCTGC CTCCTCCCAC CGCCACCTTC CAGGCCCAGC TCGACCTCTA
CGCCACTAAG AACTTGGACC TCGCCGACCT CGTCGCCCTC TCAGGTAACA GAAACACGAC CCCCCCTGTC AAAACTCGCC CTCAAAATTG GCCAATTTCG TCGTAGAAAT GTCGATCGAC
CGACCTCACG GGAGCGCAGC TCCTCCCTCA TAGATTGCAC CCGAACGGTC GACTGGATCC CTGAAGAATG GATTGGGGGT CACGTGCAGG GGCGCACACG CTCGGGGACG CCGGGTGCGG
GGCGTTCCAG AACCGGCTGC GCCCGACGGT GGACCCGAAG CTGAACAAGG TCTACGCCAA GTACCTGACG AACCTGTGCC CGACGAACGG CGCGACGGCG CGGACGGGGC TCGACTTCTT
CAGCCCGACC AAGTTCGACA ACGTCTACTA CAAGAACTTC GCGACGGGCG GCGCGCTGCT GACGTCGGAC CAGGAGCTGG ACCAGAACAA GCAGGCGCTG GGCCTGGTGC GCCTCTACGC
CTCGAACCAG AGCGCCTTCT TCAACCAGTT CCTCTGGTCC TACATCAAGA TGAGCCAGAT CGTCAGCAGC CCCCCCAACA CCGGCGAGGT TCGCCGCAAG TGCAGCGTCA ACAATGGCGG
CAAATCCTCC GCCTCCTCCT CCATCGAGCC CGAAATCATC TCCATGGTCA CCGACGGCCG CGTCGACATC TAA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGGCGAG TCGCTGCATT GGTGTCGGTG TTCGTGGCCC TGGCGCTGTG CGAGGCCGGG CTCTCGGTGG CGTTCGGGGG CGACCTGCAG TATGCGCCGA ACTATGGAGT CGAGCTCTCG
GCGCTCGAGA GGCAAGTGCC CGTGCGCGAC GGCCTGGCCT GGGGCTACTA CGCCAAGTCG TGCCCCAAGG CCGAGGACAT CGTCGCCCAG CGCGTCGCTG TCTTCCTCAA GAAGGACGTC
GGCGTCTCGC CCGGCCTGCT GCGCCTCATC TTCCATGACT GCTTCGTTCA GGGATGTGAT GGCTCGATCC TGCTGAGGCT GGAGTCCGGC ACCGAGCTCG ACGACCCTGC CAACAGGTCC
ATCCGCCAGG TGGCCCTGGA CCTCGTCGAC GATGCCAAGG CGGCCCTCGA GAAGGTGTGC CCGGGCGTCG TCACGTGCGC CGACATCGTC GTCATGGCCG GACGCGAGAG CGTCAAGCAG
GTCGGAGGCC CCGCTTTCAA TGTGCCCCTG GGACGTCGCG ACTCCTTCAC CTTCAGCAAC GATACGAGCG ACCTGCCTCC TCCCACCGCC ACCTTCCAGG CCCAGCTCGA CCTCTACGCC
ACTAAGAACT TGGACCTCGC CGACCTCGTC GCCCTCTCAG GGGCGCACAC GCTCGGGGAC GCCGGGTGCG GGGCGTTCCA GAACCGGCTG CGCCCGACGG TGGACCCGAA GCTGAACAAG
GTCTACGCCA AGTACCTGAC GAACCTGTGC CCGACGAACG GCGCGACGGC GCGGACGGGG CTCGACTTCT TCAGCCCGAC CAAGTTCGAC AACGTCTACT ACAAGAACTT CGCGACGGGC
GGCGCGCTGC TGACGTCGGA CCAGGAGCTG GACCAGAACA AGCAGGCGCT GGGCCTGGTG CGCCTCTACG CCTCGAACCA GAGCGCCTTC TTCAACCAGT TCCTCTGGTC CTACATCAAG
ATGAGCCAGA TCGTCAGCAG CCCCCCCAAC ACCGGCGAGG TTCGCCGCAA GTGCAGCGTC AACAATGGCG GCAAATCCTC CGCCTCCTCC TCCATCGAGC CCGAAATCAT CTCCATGGTC
ACCGACGGCC GCGTCGACAT CTAA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGGCGAG TCGCTGCATT GGTGTCGGTG TTCGTGGCCC TGGCGCTGTG CGAGGCCGGG CTCTCGGTGG CGTTCGGGGG CGACCTGCAG TATGCGCCGA ACTATGGAGT CGAGCTCTCG
GCGCTCGAGA GGCAAGTGCC CGTGCGCGAC GGCCTGGCCT GGGGCTACTA CGCCAAGTCG TGCCCCAAGG CCGAGGACAT CGTCGCCCAG CGCGTCGCTG TCTTCCTCAA GAAGGACGTC
GGCGTCTCGC CCGGCCTGCT GCGCCTCATC TTCCATGACT GCTTCGTTCA GGGATGTGAT GGCTCGATCC TGCTGAGGCT GGAGTCCGGC ACCGAGCTCG ACGACCCTGC CAACAGGTCC
ATCCGCCAGG TGGCCCTGGA CCTCGTCGAC GATGCCAAGG CGGCCCTCGA GAAGGTGTGC CCGGGCGTCG TCACGTGCGC CGACATCGTC GTCATGGCCG GACGCGAGAG CGTCAAGCAG
GTCGGAGGCC CCGCTTTCAA TGTGCCCCTG GGACGTCGCG ACTCCTTCAC CTTCAGCAAC GATACGAGCG ACCTGCCTCC TCCCACCGCC ACCTTCCAGG CCCAGCTCGA CCTCTACGCC
ACTAAGAACT TGGACCTCGC CGACCTCGTC GCCCTCTCAG GGGCGCACAC GCTCGGGGAC GCCGGGTGCG GGGCGTTCCA GAACCGGCTG CGCCCGACGG TGGACCCGAA GCTGAACAAG
GTCTACGCCA AGTACCTGAC GAACCTGTGC CCGACGAACG GCGCGACGGC GCGGACGGGG CTCGACTTCT TCAGCCCGAC CAAGTTCGAC AACGTCTACT ACAAGAACTT CGCGACGGGC
GGCGCGCTGC TGACGTCGGA CCAGGAGCTG GACCAGAACA AGCAGGCGCT GGGCCTGGTG CGCCTCTACG CCTCGAACCA GAGCGCCTTC TTCAACCAGT TCCTCTGGTC CTACATCAAG
ATGAGCCAGA TCGTCAGCAG CCCCCCCAAC ACCGGCGAGG TTCGCCGCAA GTGCAGCGTC AACAATGGCG GCAAATCCTC CGCCTCCTCC TCCATCGAGC CCGAAATCAT CTCCATGGTC
ACCGACGGCC GCGTCGACAT CTAATCTGAT CTATCTAATC CGCCGCGAAG AATCGATCGA CTTGTCGTCT CCGTCGCATC GATCGATTCT GCTCCTCCGC TCGAGGGTCG AAGGACTGCC
AATGCAGTGA CACCCAAGAG TTTGGGTTTG TAGATATGTA TCAACAAGGC GTAGCTAGCG AGGCGCCAGC TGTAGATCGA TAGAGTTTTG CGCAGTCTTC TAGCGTTCGA AGGGGCGAGA
GTAGAGTGTA GAGTGTAGCG CTGCGTAGAG CGTTGTGAGC TTGTTGGATT GGAGTGGAAT GGAATGTGAA ATACTGTCTT CTCTTTCAAT GAATGATGAC CGGCTGCGCC TTCAGCGCGT
CCTGCCGATC CTCTTGTTTC GAATCAGAGA GTTATAGTCG CTGAATTTTC TCGTCTCTGA TCCGAGCCAG AAGTGAGTCA ATTCTTCACT CCTCGCTCGG AAGCAGGGAA GCATGTCTTC
CACACAGTCT CAGATCTCTA TCATTTCC
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Retrieve as FASTA
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