Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
325 (299) |
| PWM (Da): |
34677.26 (32042.9) |
Transmb domain: |
i12-34o |
| PI (pH): |
4.5 (4.44) |
Peptide Signal: |
cut: 27 range:27-325 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MVTSGGRTSI ILVAVISCLF VGQASGLYVG FYAATCPNAE SIILETLKTF LASDPTLGGP LLRISYHDCF VRGCDASLLL NSVNGNVAEK DAPGPNLNSV RGYEVYDGIK AALESSCPGV
VSCADIIQIV SRDITVLDGG PSWEVQTGRR DGFTSIAAEA LANLVGPDSD YDTQKNAFAS KGLSEKDLVV LTGAHTIGRS RCVSIDQRLY NFSGVQGLTD PSLDVSFARE LKATCPSGSS
NTLEMDGTQF KFDTRYFQRL EVNKGLFSSD ASLITQPFPA SVVDQETHKD TFFADFPESM IKLAALEVLT GSDGEIRNHC AFVNS*
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Retrieve as FASTA
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| Remarks |
Complete sequence from genomic (3 introns, contig_5864:6815-8495) and RNA seq (isotig28521). |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGTGACCT CTGGAGGGAG AACTTCGATC ATTTTAGTCG CTGTAATATC ATGCCTCTTC GTGGGCCAAG CCAGTGGTCT GTATGTTGGC TTTTACGCTG CTACATGTCC CAACGCAGAA
TCCATAATAC TGGAAACACT TAAGACGTTT CTTGCTTCGG ACCCGACTCT CGGAGGTCCC CTGTTGAGAA TTTCGTATCA TGATTGCTTC GTTCGTGTAG GTTCCGAATT CCCAACACTC
CAGGCTGAAT GGCTTTTTGT AAAACTCGAA GGAGACATAT CTTGATGTTG TTCAAGTCTT TGAGTCGTGA ACTCTAGCGC TAGTTGCACA TCCGAATTAT TCAACTGGTC TTGAGCTTTG
AGTATGTGGA GTCGGTTCTT GCAATATACT TGCAGATCTG AGTACTGACG AATCGTTTTG TGCTTTATGA TACGTTCAAG GGATGTGATG CATCACTCTT ACTGAATTCA GTGAACGGCA
ATGTCGCGGA GAAGGATGCA CCGGGTCCGA ACCTAAACTC TGTCAGGGGA TACGAGGTCT ACGATGGAAT CAAGGCTGCT CTGGAGAGCT CGTGTCCGGG AGTCGTCTCA TGCGCTGATA
TCATTCAGAT TGTTTCTCGT GATATCACCG TTCTGGTAAA TTCTAACTCT GAACGCATCA CACGCTCTAG TTCTGCTCGC TGACAATTCC ATGAAGCAAT ATCCAGGGCA TTATTATAAA
GAATCTCCAT CATCCACGAA GGATTTTCCT TGACTTTTAC AGCTGTGACA GAGGTCCTCA CAACAATAAA TTGCTACTGG AGTTAGTGAA GAATTTGAGT CTGACGTTGG TTCACTGCAT
GCAGGATGGA GGCCCGTCCT GGGAGGTCCA AACTGGTCGT CGAGATGGAT TCACTTCCAT AGCAGCCGAA GCACTCGCTA ATCTTGTGGG GCCCGACTCA GACTACGACA CTCAAAAGAA
TGCTTTTGCA AGCAAGGGGC TCAGTGAGAA GGATCTGGTC GTGCTTACAG GCAAGAGATT ATCCTCATCA CAGTAACATT CTTGTATGTG TAAGCAGGCT TATGATAGCA GATGCTTGAA
CTGCCAGAGA AACAATTCAA AGCCATCTAT CCGAATCTGG TACCGGGGTT GACATAGAGA ATTCGAACAT GTTGATACTC TCATAAAATT CTGAGCTTGA AGTGTGTTCC GTTGGAACTT
TTGAGGCTGT GCATTAGATT AGTCTGAGCA TCCTACCTGC TCAGGTGAAG CTAGAACTGA CTCATGCTCT CTCGAAACAG GAGCACACAC AATTGGGCGA TCACGGTGTG TGTCTATCGA
CCAACGACTG TACAATTTCA GCGGCGTCCA AGGTCTGACC GATCCATCGT TGGACGTAAG CTTCGCCAGA GAGTTGAAAG CAACCTGCCC CAGTGGTAGC TCCAACACTC TAGAAATGGA
CGGAACCCAG TTCAAGTTCG ACACCAGGTA CTTCCAGAGA CTCGAGGTCA ACAAGGGACT GTTCTCTTCA GATGCGTCTC TCATAACTCA ACCTTTCCCG GCATCCGTGG TCGACCAAGA
AACCCACAAG GACACTTTCT TCGCGGATTT TCCAGAGTCC ATGATCAAGC TGGCCGCGCT CGAAGTCCTC ACTGGAAGCG ACGGTGAAAT TCGAAACCAC TGCGCCTTCG TTAACTCTTA
G
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGTGACCT CTGGAGGGAG AACTTCGATC ATTTTAGTCG CTGTAATATC ATGCCTCTTC GTGGGCCAAG CCAGTGGTCT GTATGTTGGC TTTTACGCTG CTACATGTCC CAACGCAGAA
TCCATAATAC TGGAAACACT TAAGACGTTT CTTGCTTCGG ACCCGACTCT CGGAGGTCCC CTGTTGAGAA TTTCGTATCA TGATTGCTTC GTTCGTGGAT GTGATGCATC ACTCTTACTG
AATTCAGTGA ACGGCAATGT CGCGGAGAAG GATGCACCGG GTCCGAACCT AAACTCTGTC AGGGGATACG AGGTCTACGA TGGAATCAAG GCTGCTCTGG AGAGCTCGTG TCCGGGAGTC
GTCTCATGCG CTGATATCAT TCAGATTGTT TCTCGTGATA TCACCGTTCT GGATGGAGGC CCGTCCTGGG AGGTCCAAAC TGGTCGTCGA GATGGATTCA CTTCCATAGC AGCCGAAGCA
CTCGCTAATC TTGTGGGGCC CGACTCAGAC TACGACACTC AAAAGAATGC TTTTGCAAGC AAGGGGCTCA GTGAGAAGGA TCTGGTCGTG CTTACAGGAG CACACACAAT TGGGCGATCA
CGGTGTGTGT CTATCGACCA ACGACTGTAC AATTTCAGCG GCGTCCAAGG TCTGACCGAT CCATCGTTGG ACGTAAGCTT CGCCAGAGAG TTGAAAGCAA CCTGCCCCAG TGGTAGCTCC
AACACTCTAG AAATGGACGG AACCCAGTTC AAGTTCGACA CCAGGTACTT CCAGAGACTC GAGGTCAACA AGGGACTGTT CTCTTCAGAT GCGTCTCTCA TAACTCAACC TTTCCCGGCA
TCCGTGGTCG ACCAAGAAAC CCACAAGGAC ACTTTCTTCG CGGATTTTCC AGAGTCCATG ATCAAGCTGG CCGCGCTCGA AGTCCTCACT GGAAGCGACG GTGAAATTCG AAACCACTGC
GCCTTCGTTA ACTCTTAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGGGGGACTA TAACCTGGGC TCATCTGTAG AGTGTCCAAG TAGTAGCTAT CGGTATCGCA ATTCTGAAGC TGCATATGTA CCAAGTGTGC GACCAGTGTT GAGTTCTCGT GCTAGCTGTA
CTCTTTCTTA GTGCGACCTT CTTCTGCTCG GAATCTACCA GTTAGTGATT TCTGCACCAC AACCATGGTG ACCTCTGGAG GGAGAACTTC GATCATTTTA GTCGCTGTAA TATCATGCCT
CTTCGTGGGC CAAGCCAGTG GTCTGTATGT TGGCTTTTAC GCTGCTACAT GTCCCAACGC AGAATCCATA ATACTGGAAA CACTTAAGAC GTTTCTTGCT TCGGACCCGA CTCTCGGAGG
TCCCCTGTTG AGAATTTCGT ATCATGATTG CTTCGTTCGT GGATGTGATG CATCACTCTT ACTGAATTCA GTGAACGGCA ATGTCGCGGA GAAGGATGCA CCGGGTCCGA ACCTAAACTC
TGTCAGGGGA TACGAGGTCT ACGATGGAAT CAAGGCTGCT CTGGAGAGCT CGTGTCCGGG AGTCGTCTCA TGCGCTGATA TCATTCAGAT TGTTTCTCGT GATATCACCG TTCTGGATGG
AGGCCCGTCC TGGGAGGTCC AAACTGGTCG TCGAGATGGA TTCACTTCCA TAGCAGCCGA AGCACTCGCT AATCTTGTGG GGCCCGACTC AGACTACGAC ACTCAAAAGA ATGCTTTTGC
AAGCAAGGGG CTCAGTGAGA AGGATCTGGT CGTGCTTACA GGAGCACACA CAATTGGGCG ATCACGGTGT GTGTCTATCG ACCAACGACT GTACAATTTC AGCGGCGTCC AAGGTCTGAC
CGATCCATCG TTGGACGTAA GCTTCGCCAG AGAGTTGAAA GCAACCTGCC CCAGTGGTAG CTCCAACACT CTAGAAATGG ACGGAACCCA GTTCAAGTTC GACACCAGGT ACTTCCAGAG
ACTCGAGGTC AACAAGGGAC TGTTCTCTTC AGATGCGTCT CTCATAACTC AACCTTTCCC GGCATCCGTG GTCGACCAAG AAACCCACAA GGACACTTTC TTCGCGGATT TTCCAGAGTC
CATGATCAAG CTGGCCGCGC TCGAAGTCCT CACTGGAAGC GACGGTGAAA TTCGAAACCA CTGCGCCTTC GTTAACTCTT AGAGTTACAA TGACCATCCT TCCCACGCAG GACTCTGTAT
ATCTAAAAGT GGATTCTTTT GTGTTTTGCA ATAATCCTGA ATTGACTTAG TTTCAAGCTT CCTCTAGATG TACCAAAATT CGTACGTCTG GATTTAGCTC TGGATTTTGC ATAGAGCTGT
ACTCTCTGTC TCGGAATAGT TGCCATGTTT CGACACAAAC TAGGCTGGCT TGCATAGATC TCATACATAT ACACACATAA GTCCCGATCT TCACACAGAG CACGACTCTA TGCGTCGACC
TGCTCTTAAT CCAGACAAAT TTGGGTGCTC TTGTTGAAAC CGTTGAATAA AACAGTGGGC CACGAAGTGG TACCACGTGT GTACACTTAG AATGACAAAA AA
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Retrieve as FASTA
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