Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
325 (299) |
PWM (Da): |
34628.23 (32108.9) |
Transmb domain: |
i12-34o (i12-34o) |
PI (pH): |
4.57 (4.51) |
Peptide Signal: |
cut: 27 range:27-325 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MVISGGRTSI SFAAVISCLL VAQASGLYVG FYAASCPNAE SIILETLKPF LASDPTLGGP LLRISYHDCF VRGCDASLLL DSVNGNVAEK DAPGPNLNSV RGYEVYDGIK AALESSCPGV
VSCADIVQIV SRDVTVLDGG PYWDVQTGRR DGLISIAAEA QANLVGPDSD YDTQKNAFAN KGLSEKDLVV LTGAHTIGRS RCVSIEQRLY NFSGVQGQTD PSLDVSFARE LKATCPSGSS
NSLEMDGTQF KFDTRYFKRL QVHKGLFGSD ASLITQPFPA SVVEEETHKD SFYADFPESM LRLAALDVLT GSDGEIRKNC AFVNS
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic and 17 ESTs. Strain="E". Containing motif YHDC instead of FHDC. Specific peptide found in cell wall proteome. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGTGATCT CTGGAGGGAG AACTTCGATC AGTTTTGCCG CTGTAATATC ATGCCTCCTC GTGGCCCAAG CCAGTGGTCT GTATGTCGGC TTTTACGCTG CTTCGTGTCC CAACGCAGAA
TCCATAATAC TTGAAACACT CAAGCCGTTT CTGGCCTCGG ACCCGACTCT CGGAGGGCCC CTGTTGAGAA TTTCGTACCA TGACTGCTTC GTTCGTGTAG GTTCCGAATT CCCAACGCTC
CAGGCTCAAT GGCTTCTTGT CAAAGTGGAA GAAGAAGACA TATGTTGATG TTGTTCAAGT CTTCGAGTCG TGGACTCTAG CTTCAGCTGC ATTCATTCAA CCGTGGGTCA ATTATTGCAA
TATACTTGCA GATGTGCGTA CTGACGACTC GTTGTGTGCC TGATGAATCG TTCAAGGGAT GTGATGCATC GCTCTTACTG GATTCAGTGA ACGGCAATGT GGCGGAGAAG GATGCACCGG
GTCCGAACCT GAACTCCGTC AGGGGATACG AGGTCTACGA TGGGATCAAG GCTGCCCTTG AGAGCTCGTG TCCGGGAGTG GTCTCATGCG CCGATATCGT CCAAATTGTT TCTCGTGATG
TCACCGTTCT GGTACATTCT GACTCTGAAC GCGTCGTGCT CTCTAGTTCC AGCAACCAAT ATCGATATCG AGGCCATTAT TATACATAAT CTCGATCGTC CATGAAGGAA TTCCCTTGAA
TTCTTACAGC TGTGACAGAG GTCCTCATTA CACTACATCG TTACCGGAGT CTGAAGAATT TGAGTCTGAT TTTAGTTGAC TTCTTGCAGG ACGGAGGTCC TTACTGGGAC GTCCAAACTG
GTCGTCGAGA TGGACTGATC TCCATAGCAG CCGAAGCACA GGCTAATCTT GTGGGTCCTG ACTCAGACTA CGACACTCAG AAGAATGCTT TTGCAAATAA GGGGCTCAGC GAGAAGGATC
TGGTCGTGCT TACAGGCAAG AGATTATCCT CATCACAGTA ACATTCCTTC ATGTGAAGCA GGCTTATAAT AGCCGATACT TGAACTGTCA GACCAATAAT TATCAGCCAT CAATCTGAAT
CTCGTTCCGG GTTGAAACAA AGAATTTCAA ATTGTTGATT ATCTAAAAAT TTCTGAGACT GAAGTTTTTT CCAGTTGATT TCCTTTTTGA GGCTGTGCAT TAGATTAGTC CGAGCATCGT
TCCTGCTCAG ATGAAGCTAG AACTTACTCA TACTCTCTCT GGAGACAGGA GCACACACAA TTGGGCGATC GCGTTGTGTA TCAATCGAAC AACGACTGTA CAATTTCAGC GGCGTTCAAG
GTCAGACGGA TCCGTCTCTG GACGTAAGCT TCGCCAGAGA GTTGAAAGCG ACGTGTCCCA GTGGCAGCTC CAACAGTCTC GAAATGGACG GAACGCAGTT CAAGTTCGAC ACCAGGTACT
TCAAGAGACT CCAGGTCCAC AAGGGACTGT TCGGCTCCGA TGCGTCTCTC ATAACTCAAC CCTTCCCGGC ATCTGTGGTC GAAGAAGAAA CCCACAAGGA CAGCTTCTAC GCGGATTTTC
CAGAGTCCAT GCTCAGGCTG GCCGCCCTCG ACGTCCTCAC CGGAAGCGAT GGTGAAATCC GAAAAAACTG CGCGTTCGTG AACTCTTAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGTGATCT CTGGAGGGAG AACTTCGATC AGTTTTGCCG CTGTAATATC ATGCCTCCTC GTGGCCCAAG CCAGTGGTCT GTATGTCGGC TTTTACGCTG CTTCGTGTCC CAACGCAGAA
TCCATAATAC TTGAAACACT CAAGCCGTTT CTGGCCTCGG ACCCGACTCT CGGAGGGCCC CTGTTGAGAA TTTCGTACCA TGACTGCTTC GTTCGTGGAT GTGATGCATC GCTCTTACTG
GATTCAGTGA ACGGCAATGT GGCGGAGAAG GATGCACCGG GTCCGAACCT GAACTCCGTC AGGGGATACG AGGTCTACGA TGGGATCAAG GCTGCCCTTG AGAGCTCGTG TCCGGGAGTG
GTCTCATGCG CCGATATCGT CCAAATTGTT TCTCGTGATG TCACCGTTCT GGACGGAGGT CCTTACTGGG ACGTCCAAAC TGGTCGTCGA GATGGACTGA TCTCCATAGC AGCCGAAGCA
CAGGCTAATC TTGTGGGTCC TGACTCAGAC TACGACACTC AGAAGAATGC TTTTGCAAAT AAGGGGCTCA GCGAGAAGGA TCTGGTCGTG CTTACAGGAG CACACACAAT TGGGCGATCG
CGTTGTGTAT CAATCGAACA ACGACTGTAC AATTTCAGCG GCGTTCAAGG TCAGACGGAT CCGTCTCTGG ACGTAAGCTT CGCCAGAGAG TTGAAAGCGA CGTGTCCCAG TGGCAGCTCC
AACAGTCTCG AAATGGACGG AACGCAGTTC AAGTTCGACA CCAGGTACTT CAAGAGACTC CAGGTCCACA AGGGACTGTT CGGCTCCGAT GCGTCTCTCA TAACTCAACC CTTCCCGGCA
TCTGTGGTCG AAGAAGAAAC CCACAAGGAC AGCTTCTACG CGGATTTTCC AGAGTCCATG CTCAGGCTGG CCGCCCTCGA CGTCCTCACC GGAAGCGATG GTGAAATCCG AAAAAACTGC
GCGTTCGTGA ACTCTTAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CTTTCAACAA CTGGACTCGC ATTTTATGGG TCACGAGTGT TGAGGGCAAT GAGCGACCTA TTAAACCCCC TCAGACGGGC AGTTGTGATC ACCATACCCT GGATGCATCT CTAGAGAGGG
TCCAAGAAGT AGCTATCGGT ATCGCTGAAG CTGCATATGA ACCGACAGTA CTGACAAGTG TTGAGTTCTC CTCCTGGCTG TACTTTGTCT GCGGGTAGTA ATTTGAGCTG ATTTGTGCAC
CGCAACCATG GTGATCTCTG GAGGGAGAAC TTCGATCAGT TTTGCCGCTG TAATATCATG CCTCCTCGTG GCCCAAGCCA GTGGTCTGTA TGTCGGCTTT TACGCTGCTT CGTGTCCCAA
CGCAGAATCC ATAATACTTG AAACACTCAA GCCGTTTCTG GCCTCGGACC CGACTCTCGG AGGGCCCCTG TTGAGAATTT CGTACCATGA CTGCTTCGTT CGTGGATGTG ATGCATCGCT
CTTACTGGAT TCAGTGAACG GCAATGTGGC GGAGAAGGAT GCACCGGGTC CGAACCTGAA CTCCGTCAGG GGATACGAGG TCTACGATGG GATCAAGGCT GCCCTTGAGA GCTCGTGTCC
GGGAGTGGTC TCATGCGCCG ATATCGTCCA AATTGTTTCT CGTGATGTCA CCGTTCTGGA CGGAGGTCCT TACTGGGACG TCCAAACTGG TCGTCGAGAT GGACTGATCT CCATAGCAGC
CGAAGCACAG GCTAATCTTG TGGGTCCTGA CTCAGACTAC GACACTCAGA AGAATGCTTT TGCAAATAAG GGGCTCAGCG AGAAGGATCT GGTCGTGCTT ACAGGAGCAC ACACAATTGG
GCGATCGCGT TGTGTATCAA TCGAACAACG ACTGTACAAT TTCAGCGGCG TTCAAGGTCA GACGGATCCG TCTCTGGACG TAAGCTTCGC CAGAGAGTTG AAAGCGACGT GTCCCAGTGG
CAGCTCCAAC AGTCTCGAAA TGGACGGAAC GCAGTTCAAG TTCGACACCA GGTACTTCAA GAGACTCCAG GTCCACAAGG GACTGTTCGG CTCCGATGCG TCTCTCATAA CTCAACCCTT
CCCGGCATCT GTGGTCGAAG AAGAAACCCA CAAGGACAGC TTCTACGCGG ATTTTCCAGA GTCCATGCTC AGGCTGGCCG CCCTCGACGT CCTCACCGGA AGCGATGGTG AAATCCGAAA
AAACTGCGCG TTCGTGAACT CTTAGAGCTA CGACGAAGCC CATGCTTCCG ACGCGGGACT CTTCTGTACA GCTAAAACCG GATTCTTTGT GTTCTGCTAT AATCCTGAAT CGACTTAGTT
TCAAAGTATC CTCTAGATGT ACCCAAATTC CTACATCTGG ATTTAGCTCT AGATTTTGCA GAGAGCTGTT TGTACTCTCT GTCTCCGAAT AGATTCCATG TTTCGACACA CACAAGCCCC
GATCTCCACA CAGAGCACAA CTCCATGCGC CGACTCGCTC TAAATCCAGA GAAATTGCGT GCTCTTGTTG AAACTGTTGA ATAATTCAGA GCGACATTGT AAGTTATATC GATGCCGCAG
ACGTTCAAAT GATTCAGTTC GCTTCGGCCC TCTAGAACTT GTTTTGGCTC GAATTTGAGT TGCTACAGAG GCCTGCAGAA TTGGGTCCCT TATGTGAATA AAATTACTCA GTAATCGAGG
CACAGTGAAG CTGTCTTCTG TAAAAnAAAA A
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Retrieve as FASTA
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