Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
331 (301) |
| PWM (Da): |
36017.98 (32834.3) |
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| PI (pH): |
4.81 (4.72) |
Peptide Signal: |
cut: 31 range:31-331 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MTSGGSRLPI WQMLGLALFV VMLAPERTGA NYLTTDFYDQ SCPQALSIVQ RKVDEFIEAD RGLAGALLRL HFHDCFVRGC DGSVLLNSTE DSLAEKEALL NKGSLRGFEE IDAIKMELEC
ACPGVVSCAD ILALVARDAT AKVGGYGWPV FLGRIDGAGS VGEEVNGSLP ERRDNFTTLV ANFARHGLDA KDMIILSGSH TIGVAHCGAF FERLYNFEGT NETDPSMDAS LAKFLKKRCP
IDKPLGLMAL GGTNGTFDTD YYKNLLTKRG LLESDVTLTS DSYGMEIVTK AVEEPSWFLT EFGIAMIKMG FIEGTHPYGW RKHCAVIEPR E
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Retrieve as FASTA
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| Remarks |
Complete sequence rom genomic (3 introns) (contig_19263:6732-8523) and RNA seq (isotig29007). |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACTTCAG GAGGTTCAAG ATTGCCCATT TGGCAAATGC TAGGTTTGGC TCTCTTTGTC GTTATGTTGG CACCTGAGCG AACAGGTGCC AACTATCTTA CGACGGATTT CTATGACCAG
AGTTGCCCTC AAGCGCTTTC TATAGTGCAG CGGAAGGTCG ACGAGTTCAT CGAGGCAGAT CGAGGACTAG CTGGAGCTCT TCTGCGCTTA CATTTCCATG ATTGCTTTGT TCGAGTAAGA
GCTTTCTGCT GCGAGCTCCA AGTTCCTACA ACCTATTACT GCTGATAACA ATGATTTCAC TCGCACAATC AGCTGTACTG TATCTGTCTT TGCTCCTCGG ACAACACCTT CTTCTGGCCG
ATAATCAGAG TTCCACTATT CGCATGTATT GGCCAGAAGA AGGTTTTGTC TGAAGAGCAT TGACATGTGT GGGCAGGAAG ATAAGGACAT GGTCAATTTT GGATTCTTAG GCTGCTCTGT
CTATAAACTC AACTATGTTA TCTTGAAACT CTCTACTGAT GACATGTGTG GACTCACTTA CGTCTCTCCT GCAGGGGTGT GATGGATCTG TGCTTCTCAA CTCAACGGAA GATAGTTTGG
CTGAGAAGGA GGCTCTTCTG AACAAAGGTT CACTCAGAGG TTTCGAGGAG ATTGATGCCA TCAAGATGGA GCTTGAATGT GCATGCCCAG GCGTTGTATC GTGTGCTGAT ATTCTTGCTC
TTGTAGCCAG AGATGCCACC GCCAAGGTAC GTAACCAACA CCTACTGGAC AAGGAAGATT TCATTGTTGA GTGTCATATC ATAATCCTTC CTCCCCGACA GCTTCTCGAA GGCACAATGT
ACACAGAACC TCTTAACGCC AGTCAGGGAC CCTTCGGTCC TTCTAATCGA ACAACCTCTG CGTATCTGAT ACAACCGATT TAATGCAAAG TATTCTGTCC CTGCATAAGA TCCAGCATTG
TGCTGATATG CTGTCAAAAA GAAATGTTTG GCTTTGCATG ACCCCTTCCT TGGCGGTTTC TGAGTACAAC CATGCATCAT GTATTAACAC CAAACACGTT GAAGCTCAGA TTGAAGGTTG
CAAAAATTCA AGCTTTGAGG CTTGCTGTTA CTATGTGTAC GTGCAGGTTG GCGGCTATGG CTGGCCAGTG TTTCTAGGTA GAATAGATGG AGCTGGTTCC GTTGGTGAGG AGGTCAACGG
TAGTCTACCA GAACGTAGGG ACAATTTTAC TACTCTTGTT GCCAACTTTG CGAGACATGG TTTGGACGCA AAGGACATGA TTATCCTGTC AGGTATCTTC TTTTTCCACT AAGCCTGCTT
CTTCAATGTG AATCAGTTTG CAGAATCAGT TGTGGACAAT AATAATTAAC TGCTGTGTCT TGCTGCAGGT TCTCACACCA TAGGCGTAGC TCATTGTGGA GCGTTTTTCG AGCGATTGTA
CAATTTTGAA GGGACGAACG AGACGGATCC TTCGATGGAC GCATCACTGG CCAAATTTCT CAAGAAGCGG TGCCCCATTG ACAAGCCTTT GGGATTGATG GCTCTCGGTG GAACGAACGG
GACATTTGAC ACTGACTATT ATAAGAACCT TCTGACCAAA CGAGGATTAC TTGAATCCGA TGTGACGCTC ACAAGTGACA GTTATGGTAT GGAAATTGTC ACCAAAGCAG TGGAAGAACC
GTCGTGGTTC TTGACCGAGT TCGGAATAGC TATGATCAAA ATGGGCTTCA TTGAGGGAAC TCATCCATAC GGCTGGAGAA AACATTGCGC CGTCATCGAG CCACGGGAAT AG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGACTTCAG GAGGTTCAAG ATTGCCCATT TGGCAAATGC TAGGTTTGGC TCTCTTTGTC GTTATGTTGG CACCTGAGCG AACAGGTGCC AACTATCTTA CGACGGATTT CTATGACCAG
AGTTGCCCTC AAGCGCTTTC TATAGTGCAG CGGAAGGTCG ACGAGTTCAT CGAGGCAGAT CGAGGACTAG CTGGAGCTCT TCTGCGCTTA CATTTCCATG ATTGCTTTGT TCGAGGGTGT
GATGGATCTG TGCTTCTCAA CTCAACGGAA GATAGTTTGG CTGAGAAGGA GGCTCTTCTG AACAAAGGTT CACTCAGAGG TTTCGAGGAG ATTGATGCCA TCAAGATGGA GCTTGAATGT
GCATGCCCAG GCGTTGTATC GTGTGCTGAT ATTCTTGCTC TTGTAGCCAG AGATGCCACC GCCAAGGTTG GCGGCTATGG CTGGCCAGTG TTTCTAGGTA GAATAGATGG AGCTGGTTCC
GTTGGTGAGG AGGTCAACGG TAGTCTACCA GAACGTAGGG ACAATTTTAC TACTCTTGTT GCCAACTTTG CGAGACATGG TTTGGACGCA AAGGACATGA TTATCCTGTC AGGTTCTCAC
ACCATAGGCG TAGCTCATTG TGGAGCGTTT TTCGAGCGAT TGTACAATTT TGAAGGGACG AACGAGACGG ATCCTTCGAT GGACGCATCA CTGGCCAAAT TTCTCAAGAA GCGGTGCCCC
ATTGACAAGC CTTTGGGATT GATGGCTCTC GGTGGAACGA ACGGGACATT TGACACTGAC TATTATAAGA ACCTTCTGAC CAAACGAGGA TTACTTGAAT CCGATGTGAC GCTCACAAGT
GACAGTTATG GTATGGAAAT TGTCACCAAA GCAGTGGAAG AACCGTCGTG GTTCTTGACC GAGTTCGGAA TAGCTATGAT CAAAATGGGC TTCATTGAGG GAACTCATCC ATACGGCTGG
AGAAAACATT GCGCCGTCAT CGAGCCACGG GAATAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TCTCAGATAG ATAAAAACAA AGAGAAGATC TTCACAGCTG ACATAGTGAT CATGACTTCA GGAGGTTCAA GATTGCCCAT TTGGCAAATG CTAGGTTTGG CTCTCTTTGT CGTTATGTTG
GCACCTGAGC GAACAGGTGC CAACTATCTT ACGACGGATT TCTATGACCA GAGTTGCCCT CAAGCGCTTT CTATAGTGCA GCGGAAGGTC GACGAGTTCA TCGAGGCAGA TCGAGGACTA
GCTGGAGCTC TTCTGCGCTT ACATTTCCAT GATTGCTTTG TTCGAGGGTG TGATGGATCT GTGCTTCTCA ACTCAACGGA AGATAGTTTG GCTGAGAAGG AGGCTCTTCT GAACAAAGGT
TCACTCAGAG GTTTCGAGGA GATTGATGCC ATCAAGATGG AGCTTGAATG TGCATGCCCA GGCGTTGTAT CGTGTGCTGA TATTCTTGCT CTTGTAGCCA GAGATGCCAC CGCCAAGGTT
GGCGGCTATG GCTGGCCAGT GTTTCTAGGT AGAATAGATG GAGCTGGTTC CGTTGGTGAG GAGGTCAACG GTAGTCTACC AGAACGTAGG GACAATTTTA CTACTCTTGT TGCCAACTTT
GCGAGACATG GTTTGGACGC AAAGGACATG ATTATCCTGT CAGGTTCTCA CACCATAGGC GTAGCTCATT GTGGAGCGTT TTTCGAGCGA TTGTACAATT TTGAAGGGAC GAACGAGACG
GATCCTTCGA TGGACGCATC ACTGGCCAAA TTTCTCAAGA AGCGGTGCCC CATTGACAAG CCTTTGGGAT TGATGGCTCT CGGTGGAACG AACGGGACAT TTGACACTGA CTATTATAAG
AACCTTCTGA CCAAACGAGG ATTACTTGAA TCCGATGTGA CGCTCACAAG TGACAGTTAT GGTATGGAAA TTGTCACCAA AGCAGTGGAA GAACCGTCGT GGTTCTTGAC CGAGTTCGGA
ATAGCTATGA TCAAAATGGG CTTCATTGAG GGAACTCATC CATACGGCTG GAGAAAACAT TGCGCCGTCA TCGAGCCACG GGAATAGTAA TACTACTGAT CGTTATCTTC ATCTCCACGA
TACAGATCAT GACTCCAAAG GGCTGGAAAA ACATACAGGA CATCTTAAAT CAATTCTGCC AATAATACTT CGAGGTCTAC AGTACGTGGA TAACCTGTAA ATACTTCTCG AAAAAGTATC
TCTACCACTT TTTCGGAGCA TTGTCAGGAC CTTCTTCGAC GAGTCCTGCA AATTTTTCTA ATATTCCAGT CAAACTTGTA AAAATTTCAG TTGAATCTTA CAAGGACAAT TTGTGCAATA
AACATCGAGT TTTTCCTTCG GATCCACATT TTACTTGTTC CATCAAAAAA
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Retrieve as FASTA
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