Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
324 (302) |
PWM (Da): |
34955.92 (32524.7) |
|
PI (pH): |
9.48 (9.76) |
Peptide Signal: |
cut: 23 range:23-324 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MDSRWLLCII GVVVMASATA DAQLSPTFYN SKCPKAVAKV AEVVKAAVAK DRTLAPALLR LHFHDCFVRG CDASVLLDST AGVSGEKDAF GNKNSLRGFE VIDSVKTQVE ALCPGVVSCS
DILTLAARDA IQAFGGLNWT VSLGRRDGLS SSVKQANEDL PPPSFTFDSL VSLFNRKGFS MKEVVTLSGS HTIGVAHCSN IQSRLYNFSK TTPTDPSIEP AFAASLKKQC KFGDTKTTIR
MDQSSVKDAW DQNFYSNVLK GKVLFQSDDA TKRNSQGLKI VQNYNKKGSP FSSDFAAAMV KLGNLEVLTG SKGQIRRKCN VVNK*
|
Retrieve as FASTA
|
|
Remarks |
Complete sequence from genomic (3 introns, contig_4547:4538-6190) and RNA seq (isotig27475). |
DNA ►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGACTCGA GGTGGCTCCT GTGCATTATT GGAGTCGTGG TCATGGCTTC TGCTACCGCT GATGCTCAAT TGTCACCGAC CTTCTACAAC TCCAAGTGCC CCAAGGCAGT GGCTAAAGTC
GCTGAGGTTG TCAAAGCCGC TGTCGCGAAG GACAGGACTC TTGCACCTGC TCTTCTACGA CTCCACTTCC ATGATTGCTT TGTGCGGGTT AGTACCTCCC CTTGACTCAT TCTATATTGC
AATTGGCAGC GTCTCTGTGT TACCTTCGTT GCTCAAGATT GCAATTCGCC GTGCCAGTCA GATTTGATAA AATTCGTCCT CGGTACGCGC AAAATCAAAA GAGTTGCTGT ATCATCATTC
CAAGTCTCCC TTGAGTACCT ATCAATCAGT GAATTTTGTG GTGTGTTATA ATCGAAGTAT AGACTCCTAG ATGAGAGTGA TCACCAGATC CAATCACGAC ATTGATGGGG TTCTATGGCA
GCCTTGACAG TTGTGAGGGC CCAGAGATGC ACATTTTTCA TTATTGTGGT GTACTCTGAT TTGCAATTTG TGAAATGACT GAATGCTGCA GGGCTGCGAT GCTTCTGTAC TTTTAGACTC
CACAGCGGGA GTGTCGGGAG AGAAAGATGC TTTCGGAAAT AAAAATTCTC TCAGAGGGTT CGAAGTGATT GACAGTGTCA AAACGCAAGT CGAAGCTCTG TGCCCTGGGG TCGTCTCTTG
CTCTGATATC CTGACTCTTG CTGCCCGAGA TGCGATTCAA GCGGTAAGTT TCACGAGGAA ATTTCGCATT AAGTTTTCAT CAATTTGCCT AAGAGCGATG CCATGCCTTG GTCTGGACTG
GACTGTGCTA ACCTGTCTCT CTCATTCTCT TGACATGCAC AGTTTGGAGG ATTGAATTGG ACTGTCTCGC TGGGTCGAAG AGATGGATTA AGTAGTTCCG TCAAACAAGC CAACGAGGAC
TTGCCTCCTC CTTCTTTCAC TTTCGATTCT TTAGTGAGCC TCTTCAACAG AAAAGGGTTT TCCATGAAGG AGGTGGTCAC TTTGTCTGGT ACGCCTCTCA CTCTCGTGAC CAAGTCGTTT
CCATGGATTG TACACCCTCT CTAGAAGAGC TTCACGAGGA AATCAATGCA ATCACATGCT TAGGCTTCGA ATTCTGCAAA CTTCCTGGAA ATCAAAGCTG CCTCCGAAAT GAGATATGGC
TAACTCGTTC AGACTTAACC AAGCTCTATA ATCGCATCTG CAGGTTCTCA TACCATTGGA GTCGCTCACT GCTCTAATAT ACAAAGTCGT CTGTACAATT TCTCGAAAAC GACCCCGACC
GACCCTTCCA TCGAGCCGGC ATTCGCTGCG TCGCTCAAGA AGCAGTGCAA GTTCGGGGAC ACAAAAACTA CCATCAGAAT GGACCAGTCC AGCGTCAAGG ACGCTTGGGA CCAGAACTTT
TACTCCAACG TGCTCAAGGG CAAAGTTCTG TTCCAGTCCG ACGACGCCAC TAAGAGAAAC TCGCAGGGTC TCAAGATCGT GCAAAACTAC AACAAGAAAG GCTCTCCGTT CAGCTCGGAT
TTTGCAGCTG CCATGGTGAA ACTGGGCAAT CTGGAAGTCC TCACAGGCAG CAAGGGCCAG ATCCGGAGAA AATGCAACGT CGTGAACAAG TAG
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGACTCGA GGTGGCTCCT GTGCATTATT GGAGTCGTGG TCATGGCTTC TGCTACCGCT GATGCTCAAT TGTCACCGAC CTTCTACAAC TCCAAGTGCC CCAAGGCAGT GGCTAAAGTC
GCTGAGGTTG TCAAAGCCGC TGTCGCGAAG GACAGGACTC TTGCACCTGC TCTTCTACGA CTCCACTTCC ATGATTGCTT TGTGCGGGGC TGCGATGCTT CTGTACTTTT AGACTCCACA
GCGGGAGTGT CGGGAGAGAA AGATGCTTTC GGAAATAAAA ATTCTCTCAG AGGGTTCGAA GTGATTGACA GTGTCAAAAC GCAAGTCGAA GCTCTGTGCC CTGGGGTCGT CTCTTGCTCT
GATATCCTGA CTCTTGCTGC CCGAGATGCG ATTCAAGCGT TTGGAGGATT GAATTGGACT GTCTCGCTGG GTCGAAGAGA TGGATTAAGT AGTTCCGTCA AACAAGCCAA CGAGGACTTG
CCTCCTCCTT CTTTCACTTT CGATTCTTTA GTGAGCCTCT TCAACAGAAA AGGGTTTTCC ATGAAGGAGG TGGTCACTTT GTCTGGTTCT CATACCATTG GAGTCGCTCA CTGCTCTAAT
ATACAAAGTC GTCTGTACAA TTTCTCGAAA ACGACCCCGA CCGACCCTTC CATCGAGCCG GCATTCGCTG CGTCGCTCAA GAAGCAGTGC AAGTTCGGGG ACACAAAAAC TACCATCAGA
ATGGACCAGT CCAGCGTCAA GGACGCTTGG GACCAGAACT TTTACTCCAA CGTGCTCAAG GGCAAAGTTC TGTTCCAGTC CGACGACGCC ACTAAGAGAA ACTCGCAGGG TCTCAAGATC
GTGCAAAACT ACAACAAGAA AGGCTCTCCG TTCAGCTCGG ATTTTGCAGC TGCCATGGTG AAACTGGGCA ATCTGGAAGT CCTCACAGGC AGCAAGGGCC AGATCCGGAG AAAATGCAAC
GTCGTGAACA AGTAG
|
Retrieve as FASTA
|
|