Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
344 (325) |
| PWM (Da): |
35720.58 (33743.5) |
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| PI (pH): |
4.38 (4.32) |
Peptide Signal: |
cut: 20 range:20-344 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MGFKTLLAFI GVSVASVNAA ALQSHTCPDG SRTSNTACCA FFPLLQDLRT NLFGPDCGED VHEALRLSFH DAIAFSKAQG PSVGGGADGS MLIFPDIEPN FTANAGISDS FGAAVAITNC
PGAPRLEFLA GRPNAKAPAI DGLIPEPQDS VESIFARMAD GGDFSPPEVV ALLASHTIAR SDHVVPGFEQ VPFDSTPFTF DSQFFLEVLL KGTGFPGNGS TDVGLGEVES PLPLGSGADV
GELRLQSDFA IARDARTACT WQGFVNEQEK MAGAFKAAMA KMAIIGHDKI HSLTALTFPA TKTIADIDQS CASSPFPSLA SDPGATETLI PNCPHNAPTC VILA*
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Retrieve as FASTA
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| Remarks |
5 MnP on scaffold_28.
fgenesh1_kg.28_#_490_#_Locus6409v1rpkm27.14 |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGCTTCA AAACTCTCCT TGCTTTCATC GGTGTCTCTG TGGCATCTGT CAATGCCGCA GCCCTCCAGA GCCACACCTG TCCCGATGGC TCTAGGACGT CGAACACTGC GTGCTGCGCC
TTCTTCCCTC TTCTCCAGGA CCTCCGAACG AACCTGTGAG CAGCCCCATA GGATAAACAT TTTTTATTGT CCCTCGCTGA CCATGCTCAA GGTTTGGCCC CGACTGTGGT GAGGATGTCC
ACGAGGCACT GCGTCTTAGT TTCCGTGAGC TCCAATCCCA AGCACCAATC TCCCTTGACT GATCAGTTTC ATTAAAGACG ACGCCATTGC GTTCTCGAAG GCTCAAGGAC CGTCAGTGGG
TGGAGGTGCT GATGGGTCCA TGCTCATCTT CCCCGACATC GAGCCCAACT TCACCGCGAA CGCTGGTATC AGTGACAGTG TTCAATTCAT GACCCCTTCC TCCAAAGGCA CAACACCATT
ACTGCTGGTG ACTTAATCCA GTTTGGTGCT GCCGTCGCCA TCACCAACTG CCCGGGTGCA CCCCGACTTG AGTTCTTGGC CGGACGTCCC AATGCTAAAG CCCCTGCCAT CGACGGGCTG
ATTCCCGAGC CCCAAGACTC CGTCGAAAGT ATCTTCGCCC GTATGGCTGA TGGCGGAGAC TTCTCCCCCC CTGAGGTCGT TGCCTTGCTG GCATCCCACA CCATCGCGCG TTCGGACCAC
GTCGTCCCTG GTTTCGAACA GGTTCCCTTT GACTCGACGC CCTTCACTTT CGACTCCCAG TTCTTCCTCG AGGTGTTGCT CAAGGGAACC GGATTCCCCG GAAACGGCTC CACTGACGTC
GGCCTCGGTA TGATTCACCT CTGTAGACAT CTATTGACGC TAATGTATTC TACCCCAGGT GAGGTGGAGT CCCCCCTCCC ACTAGGCTCT GGTGCCGACG TTGGCGAACT CCGTTTGCAG
TCAGACTTCG CCATCGCTCG TGGTAAGCGC CTCCCAAGTG CTAAGTGACC CTGACAAACC TGTTCCCACA GACGCTAGGA CCGCATGCAC GTGGCAAGGC TTCGTCAACG AGCAAGAGAA
GATGGCCGGC GCCTTCAAGG CAGCCATGGC TAAAATGGCT ATTATTGGCC ACGACAAAAT TCACTCATTG ACTGCTCTGA CGTCATTCCC CAACCCGTCC CCGCGACGGG CAAGCCTGCC
ACGTGAGTAA TCATCTTTCC CATAGAGTAT CCGAGCTGAT CGTGTCGCCC GTGTGTAGAT TCCCTGCCAC AAAAACAATC GCCGACATTG ACCAGTCGTG TGCCTCCTCT CCCTTCCCGA
GCCTTGCCTC CGACCCCGGT GCGACTGAGA CCCTGATCCC GTAAGTGGCT GTCTATAGCC TTTGATGAGG TACACGGACT GACCATGCGG ATTGCAGTAA TTGCCCTCAC AATGCGCCGA
CCTGTGTCAT ATTGGCATAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGCTTCA AAACTCTCCT TGCTTTCATC GGTGTCTCTG TGGCATCTGT CAATGCCGCA GCCCTCCAGA GCCACACCTG TCCCGATGGC TCTAGGACGT CGAACACTGC GTGCTGCGCC
TTCTTCCCTC TTCTCCAGGA CCTCCGAACG AACCTGTTTG GCCCCGACTG TGGTGAGGAT GTCCACGAGG CACTGCGTCT TAGTTTCCAC GACGCCATTG CGTTCTCGAA GGCTCAAGGA
CCGTCAGTGG GTGGAGGTGC TGATGGGTCC ATGCTCATCT TCCCCGACAT CGAGCCCAAC TTCACCGCGA ACGCTGGTAT CAGTGACAGT TTTGGTGCTG CCGTCGCCAT CACCAACTGC
CCGGGTGCAC CCCGACTTGA GTTCTTGGCC GGACGTCCCA ATGCTAAAGC CCCTGCCATC GACGGGCTGA TTCCCGAGCC CCAAGACTCC GTCGAAAGTA TCTTCGCCCG TATGGCTGAT
GGCGGAGACT TCTCCCCCCC TGAGGTCGTT GCCTTGCTGG CATCCCACAC CATCGCGCGT TCGGACCACG TCGTCCCTGG TTTCGAACAG GTTCCCTTTG ACTCGACGCC CTTCACTTTC
GACTCCCAGT TCTTCCTCGA GGTGTTGCTC AAGGGAACCG GATTCCCCGG AAACGGCTCC ACTGACGTCG GCCTCGGTGA GGTGGAGTCC CCCCTCCCAC TAGGCTCTGG TGCCGACGTT
GGCGAACTCC GTTTGCAGTC AGACTTCGCC ATCGCTCGTG ACGCTAGGAC CGCATGCACG TGGCAAGGCT TCGTCAACGA GCAAGAGAAG ATGGCCGGCG CCTTCAAGGC AGCCATGGCT
AAAATGGCTA TTATTGGCCA CGACAAAATT CACTCATTGA CTGCTCTGAC ATTCCCTGCC ACAAAAACAA TCGCCGACAT TGACCAGTCG TGTGCCTCCT CTCCCTTCCC GAGCCTTGCC
TCCGACCCCG GTGCGACTGA GACCCTGATC CCTAATTGCC CTCACAATGC GCCGACCTGT GTCATATTGG CATAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGGGAGGTAG AACGCAGTCC TTCACCTCAC TCAGGTAGCA CAACAGGCAG CAAGGTCTTC AGCAGTTAAC ATGGGCTTCA AAACTCTCCT TGCTTTCATC GGTGTCTCTG TGGCATCTGT
CAATGCCGCA GCCCTCCAGA GCCACACCTG TCCCGATGGC TCTAGGACGT CGAACACTGC GTGCTGCGCC TTCTTCCCTC TTCTCCAGGA CCTCCGAACG AACCTGTTTG GCCCCGACTG
TGGTGAGGAT GTCCACGAGG CACTGCGTCT TAGTTTCCAC GACGCCATTG CGTTCTCGAA GGCTCAAGGA CCGTCAGTGG GTGGAGGTGC TGATGGGTCC ATGCTCATCT TCCCCGACAT
CGAGCCCAAC TTCACCGCGA ACGCTGGTAT CAGTGACAGT TTTGGTGCTG CCGTCGCCAT CACCAACTGC CCGGGTGCAC CCCGACTTGA GTTCTTGGCC GGACGTCCCA ATGCTAAAGC
CCCTGCCATC GACGGGCTGA TTCCCGAGCC CCAAGACTCC GTCGAAAGTA TCTTCGCCCG TATGGCTGAT GGCGGAGACT TCTCCCCCCC TGAGGTCGTT GCCTTGCTGG CATCCCACAC
CATCGCGCGT TCGGACCACG TCGTCCCTGG TTTCGAACAG GTTCCCTTTG ACTCGACGCC CTTCACTTTC GACTCCCAGT TCTTCCTCGA GGTGTTGCTC AAGGGAACCG GATTCCCCGG
AAACGGCTCC ACTGACGTCG GCCTCGGTGA GGTGGAGTCC CCCCTCCCAC TAGGCTCTGG TGCCGACGTT GGCGAACTCC GTTTGCAGTC AGACTTCGCC ATCGCTCGTG ACGCTAGGAC
CGCATGCACG TGGCAAGGCT TCGTCAACGA GCAAGAGAAG ATGGCCGGCG CCTTCAAGGC AGCCATGGCT AAAATGGCTA TTATTGGCCA CGACAAAATT CACTCATTGA CTGCTCTGAC
ATTCCCTGCC ACAAAAACAA TCGCCGACAT TGACCAGTCG TGTGCCTCCT CTCCCTTCCC GAGCCTTGCC TCCGACCCCG GTGCGACTGA GACCCTGATC CCTAATTGCC CTCACAATGC
GCCGACCTGT GTCATATTGG CATAGTGGAT TGCATACAAG GTCCAACTGG CCGCAGCTAA ACAGACAGAG CGGCCGGGGA TTCGATATTT AACTCCAGGG CGATTACACC CTGTTTTCGT
TAGTTTTCAT AATTGCCGCC TTCCTGTAGC CTCTGTGAT
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Retrieve as FASTA
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