Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
380 (361) |
| PWM (Da): |
39495.46 (37518.4) |
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| PI (pH): |
4.34 (4.29) |
Peptide Signal: |
cut: 20 range:20-380 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MGFKTLLAFI GVSVASVNAA ALKSHTCPDG TRTSNTACCA FFPLLQDLQT NLFGGNCGED VHETLRISFH DAIAFSKAQG PAAGGGADGS MLIFPDVEPN FVANNGISDS VAFLTPFLQR
HNTISAGDLI QFGAAAAITN CPGAPQLEFL AGRPNATAPA IDGLIPEPQD SVDSIFARML DGGDFSPDEV VALLTSHTIA RSDHVVPSSM QVPFDSTPFT FDSQIFVEVL LKGTGFPGNG
STSDVGLGEV ESPLPLGSGA DTGELRLQSD FAIARDARTA CTWQGFVNEQ EKMANAFKKA MAKMAIIGHD RKALIDCSEV IPQPVPATGK PATFPATKTI ADIDQSCASS PFPSLASDPG
ATQSLIPNCP NDASTCIILA *
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Retrieve as FASTA
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| Remarks |
5 MnP on th scaffold_28.
fgenesh1_kg.28_#_515_#_Locus6409v1rpkm27.14 |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGCTTCA AAACTCTCCT TGCTTTCATC GGTGTCTCCG TGGCATCTGT CAATGCCGCC GCCCTCAAGA GCCACACCTG TCCCGATGGC ACTAGGACGT CGAACACTGC GTGCTGCGCC
TTCTTCCCTC TTCTCCAGGA CCTCCAAACG AACCTGTGAG CAGCCCCATA GGGTAAACAT TTTTTATGGT CCCTCGCTGA CCATGCTCAA GGTTTGGCGG CAACTGTGGT GAGGACGTCC
ACGAGACACT GCGTATTAGC TTCCGTGAGC TCCAATCACA AGCACCAATC TCCCTTGACT GATCAGTTTC ATTAAAGACG ACGCCATTGC GTTCTCGAAG GCTCAAGGCC CAGCAGCCGG
TGGAGGTGCT GATGGGTCCA TGCTCATCTT CCCCGACGTC GAGCCCAACT TCGTCGCGAA CAATGGTATC AGTGACAGTG TTGCTTTCCT GACCCCCTTC CTCCAAAGGC ACAACACCAT
CAGTGCTGGT GACTTAATCC AGTTTGGTGC TGCCGCCGCC ATCACCAACT GCCCGGGTGC ACCCCAACTT GAGTTCTTGG CCGGACGTCC CAATGCTACC GCCCCTGCCA TCGACGGACT
GATTCCCGAG CCCCAAGACT CCGTCGACAG TATCTTCGCC CGCATGCTTG ATGGCGGAGA CTTCTCCCCC GATGAGGTCG TTGCCTTGCT GACATCCCAC ACCATCGCGC GTTCGGACCA
CGTCGTCCCT AGCTCAATGC AGGTTCCCTT TGACTCGACG CCCTTCACTT TCGACTCCCA GATCTTCGTC GAGGTGCTGC TCAAGGGAAC CGGGTTCCCC GGAAACGGCT CCACTTCCGA
CGTCGGCCTC GGTATGATTC ACCTCAGTAG ACATCTATTG ACGCTAATGT ATTCTACCCC AGGTGAGGTG GAGTCCCCCC TCCCACTAGG CTCTGGTGCC GACACTGGCG AACTCCGTTT
GCAGTCAGAC TTCGCCATCG CTCGTGGTAA GCGCCTCTCA AGTGCTAAGT GACCCTGACA AACCTGTTCC CAAAGATGCT AGGACCGCAT GCACGTGGCA AGGCTTCGTC AACGAGCAGG
AGAAGATGGC CAACGCCTTC AAGAAAGCCA TGGCTAAGAT GGCTATTATT GGCCACGACC GAAAGGCACT CATCGACTGC TCTGAGGTCA TTCCCCAACC CGTCCCCGCG ACGGGCAAGC
CTGCCACGTG AGTAATCATC TTTCCCATAG AGGATCCGAG CTGATCGTGT CGCCCGTGTG TAGATTCCCT GCCACAAAAA CAATCGCCGA CATTGACCAG TCGTGTGCCT CCTCTCCCTT
CCCGAGCCTT GCCTCCGACC CCGGTGCGAC TCAGTCCCTG ATCCCGTAAG TGGCTGTCTA TAGCCTTTCA TGATGTACAC GGACTGACCA TGCGGATTGC AGTAATTGCC CGAACGACGC
GTCGACCTGT ATCATATTGG CATAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGCTTCA AAACTCTCCT TGCTTTCATC GGTGTCTCCG TGGCATCTGT CAATGCCGCC GCCCTCAAGA GCCACACCTG TCCCGATGGC ACTAGGACGT CGAACACTGC GTGCTGCGCC
TTCTTCCCTC TTCTCCAGGA CCTCCAAACG AACCTGTTTG GCGGCAACTG TGGTGAGGAC GTCCACGAGA CACTGCGTAT TAGCTTCCAC GACGCCATTG CGTTCTCGAA GGCTCAAGGC
CCAGCAGCCG GTGGAGGTGC TGATGGGTCC ATGCTCATCT TCCCCGACGT CGAGCCCAAC TTCGTCGCGA ACAATGGTAT CAGTGACAGT GTTGCTTTCC TGACCCCCTT CCTCCAAAGG
CACAACACCA TCAGTGCTGG TGACTTAATC CAGTTTGGTG CTGCCGCCGC CATCACCAAC TGCCCGGGTG CACCCCAACT TGAGTTCTTG GCCGGACGTC CCAATGCTAC CGCCCCTGCC
ATCGACGGAC TGATTCCCGA GCCCCAAGAC TCCGTCGACA GTATCTTCGC CCGCATGCTT GATGGCGGAG ACTTCTCCCC CGATGAGGTC GTTGCCTTGC TGACATCCCA CACCATCGCG
CGTTCGGACC ACGTCGTCCC TAGCTCAATG CAGGTTCCCT TTGACTCGAC GCCCTTCACT TTCGACTCCC AGATCTTCGT CGAGGTGCTG CTCAAGGGAA CCGGGTTCCC CGGAAACGGC
TCCACTTCCG ACGTCGGCCT CGGTGAGGTG GAGTCCCCCC TCCCACTAGG CTCTGGTGCC GACACTGGCG AACTCCGTTT GCAGTCAGAC TTCGCCATCG CTCGTGATGC TAGGACCGCA
TGCACGTGGC AAGGCTTCGT CAACGAGCAG GAGAAGATGG CCAACGCCTT CAAGAAAGCC ATGGCTAAGA TGGCTATTAT TGGCCACGAC CGAAAGGCAC TCATCGACTG CTCTGAGGTC
ATTCCCCAAC CCGTCCCCGC GACGGGCAAG CCTGCCACAT TCCCTGCCAC AAAAACAATC GCCGACATTG ACCAGTCGTG TGCCTCCTCT CCCTTCCCGA GCCTTGCCTC CGACCCCGGT
GCGACTCAGT CCCTGATCCC TAATTGCCCG AACGACGCGT CGACCTGTAT CATATTGGCA TAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGGGAGGTAG AACACAGTCC TTCGCCTCAC AGGTTGCACA ACAGGTAGCA AGGTCTTCAG CAGTCAACAT GGGCTTCAAA ACTCTCCTTG CTTTCATCGG TGTCTCCGTG GCATCTGTCA
ATGCCGCCGC CCTCAAGAGC CACACCTGTC CCGATGGCAC TAGGACGTCG AACACTGCGT GCTGCGCCTT CTTCCCTCTT CTCCAGGACC TCCAAACGAA CCTGTTTGGC GGCAACTGTG
GTGAGGACGT CCACGAGACA CTGCGTATTA GCTTCCACGA CGCCATTGCG TTCTCGAAGG CTCAAGGCCC AGCAGCCGGT GGAGGTGCTG ATGGGTCCAT GCTCATCTTC CCCGACGTCG
AGCCCAACTT CGTCGCGAAC AATGGTATCA GTGACAGTGT TGCTTTCCTG ACCCCCTTCC TCCAAAGGCA CAACACCATC AGTGCTGGTG ACTTAATCCA GTTTGGTGCT GCCGCCGCCA
TCACCAACTG CCCGGGTGCA CCCCAACTTG AGTTCTTGGC CGGACGTCCC AATGCTACCG CCCCTGCCAT CGACGGACTG ATTCCCGAGC CCCAAGACTC CGTCGACAGT ATCTTCGCCC
GCATGCTTGA TGGCGGAGAC TTCTCCCCCG ATGAGGTCGT TGCCTTGCTG ACATCCCACA CCATCGCGCG TTCGGACCAC GTCGTCCCTA GCTCAATGCA GGTTCCCTTT GACTCGACGC
CCTTCACTTT CGACTCCCAG ATCTTCGTCG AGGTGCTGCT CAAGGGAACC GGGTTCCCCG GAAACGGCTC CACTTCCGAC GTCGGCCTCG GTGAGGTGGA GTCCCCCCTC CCACTAGGCT
CTGGTGCCGA CACTGGCGAA CTCCGTTTGC AGTCAGACTT CGCCATCGCT CGTGATGCTA GGACCGCATG CACGTGGCAA GGCTTCGTCA ACGAGCAGGA GAAGATGGCC AACGCCTTCA
AGAAAGCCAT GGCTAAGATG GCTATTATTG GCCACGACCG AAAGGCACTC ATCGACTGCT CTGAGGTCAT TCCCCAACCC GTCCCCGCGA CGGGCAAGCC TGCCACATTC CCTGCCACAA
AAACAATCGC CGACATTGAC CAGTCGTGTG CCTCCTCTCC CTTCCCGAGC CTTGCCTCCG ACCCCGGTGC GACTCAGTCC CTGATCCCTA ATTGCCCGAA CGACGCGTCG ACCTGTATCA
TATTGGCATA GTGGATTGCA TAGGAGGCTC CTAACTGGCC GCAGCTGAAC AGACAGAGCG GGCGGGGATT CGATATTTAA
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Retrieve as FASTA
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