Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
380 (361) |
| PWM (Da): |
39426.33 (37449.3) |
|
| PI (pH): |
4.24 (4.20) |
Peptide Signal: |
cut: 20 range:20-380 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MGFKTLLAFI GVSVASVNAA ALKSHTCPDG SRTSNTACCA FFPLLQDLQT NLFGGNCGED VHETLRISFH DAIAFSKAQG PAAGGGADGS MLIFPDVEPN FVANNGISDS VAFLTPFLQR
HNTISAGDLI QFGAAAAITN CPGAPQLEFL AGRPNATAPA IDGLIPEPQD SVDSIFARML DGGDFSPDEV VALLTSHTIA RSDHVVPSSM QVPFDSTPFT FDSQIFVEVL LKGTGFPGNG
STSDVGLGEV ESPLPLGSGA DTGELRLQSD FAIARDARTA CTWQGFVNEQ EKMANAFKAA MAKMAIIGHD RNSLIDCSEV IPQPVPATGK PATFPATKTI ADIDQSCASS PFPSLASDPG
ATQSLIPNCP NDASTCIILA *
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Retrieve as FASTA
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| Remarks |
5 MnP in the scaffold_28
fgenesh1_kg.28_#_499_#_Locus6409v1rpkm27.14 |
DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGCTTCA AAACTCTCCT TGCTTTCATC GGTGTCTCCG TGGCATCTGT CAATGCCGCG GCTCTCAAGA GCCACACCTG TCCTGATGGC TCTAGGACGT CGAACACTGC GTGCTGCGCC
TTCTTCCCTC TTCTCCAGGA CCTCCAAACG AACCTGTGAG CAGCCCCATA GTAATATTTT TATGGTCGCT CGCTGACCAT GCTCAAGGTT TGGCGGCAAC TGCGGTGAAG ATGTCCACGA
GACACTGCGT ATTAGCTTCC GTGAGCTCCA ATCCAAAGCA CCAATCTCCC TTGACTGATC AGTTTCATTG AAGACGACGC CATTGCGTTC TCGAAGGCTC AAGGTCCAGC AGCCGGTGGA
GGTGCTGATG GGTCCATGCT CATCTTCCCC GACGTCGAGC CCAACTTCGT CGCGAACAAT GGTATCAGTG ACAGTGTTGC TTTCCTGACC CCCTTCCTCC AAAGGCACAA CACCATCAGT
GCTGGTGACT TAATCCAGTT TGGTGCTGCC GCCGCCATCA CCAACTGCCC GGGTGCACCC CAACTTGAGT TCTTGGCCGG ACGTCCCAAT GCTACCGCCC CTGCCATCGA CGGACTGATT
CCCGAGCCCC AAGACTCCGT CGACAGTATC TTCGCCCGCA TGCTTGATGG CGGAGACTTC TCCCCCGATG AGGTCGTTGC CTTGCTGACA TCCCACACCA TCGCGCGTTC GGACCACGTC
GTCCCTAGCT CAATGCAGGT TCCCTTTGAC TCGACGCCCT TCACTTTCGA CTCCCAGATC TTCGTCGAGG TGCTGCTCAA GGGAACCGGG TTCCCCGGAA ACGGCTCCAC TTCCGACGTC
GGCCTCGGTA TGATTCACCT CAGTAGACAT CTATTGACGC TAATGTATTC TACCCCAGGT GAGGTGGAGT CCCCCCTCCC ACTAGGCTCT GGTGCCGACA CTGGCGAACT CCGTTTGCAG
TCAGACTTCG CCATCGCTCG TGGTAAGCGC CTCTCAAGTG CTAAGTGACC CTGACAAACC TGTTCCCACA GACGCTAGGA CCGCATGCAC GTGGCAAGGC TTCGTCAACG AGCAAGAGAA
GATGGCCAAC GCCTTCAAGG CAGCCATGGC TAAAATGGCT ATTATTGGCC ACGACCGAAA TTCACTCATC GACTGCTCTG AGGTCATTCC CCAACCCGTC CCCGCCACGG GCAAGCCTGC
CACGTGAGTA ATCATCTTTC CCATAGGGTA TCCGAGCTGA TCGTGTCGCC CATGTGTAGA TTCCCTGCCA CAAAAACAAT CGCCGACATT GACCAGTCGT GTGCCTCCTC TCCCTTCCCG
AGCCTTGCCT CCGACCCCGG TGCGACTCAG TCCCTGATCC CGTAAGTGGC TGTCTATAGC CTTTGATGAG GTACACGGAC TGACCATGCG GATTGCAGTA ATTGCCCGAA CGACGCGTCG
ACCTGTATCA TATTGGCATA G
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGGCTTCA AAACTCTCCT TGCTTTCATC GGTGTCTCCG TGGCATCTGT CAATGCCGCG GCTCTCAAGA GCCACACCTG TCCTGATGGC TCTAGGACGT CGAACACTGC GTGCTGCGCC
TTCTTCCCTC TTCTCCAGGA CCTCCAAACG AACCTGTTTG GCGGCAACTG CGGTGAAGAT GTCCACGAGA CACTGCGTAT TAGCTTCCAC GACGCCATTG CGTTCTCGAA GGCTCAAGGT
CCAGCAGCCG GTGGAGGTGC TGATGGGTCC ATGCTCATCT TCCCCGACGT CGAGCCCAAC TTCGTCGCGA ACAATGGTAT CAGTGACAGT GTTGCTTTCC TGACCCCCTT CCTCCAAAGG
CACAACACCA TCAGTGCTGG TGACTTAATC CAGTTTGGTG CTGCCGCCGC CATCACCAAC TGCCCGGGTG CACCCCAACT TGAGTTCTTG GCCGGACGTC CCAATGCTAC CGCCCCTGCC
ATCGACGGAC TGATTCCCGA GCCCCAAGAC TCCGTCGACA GTATCTTCGC CCGCATGCTT GATGGCGGAG ACTTCTCCCC CGATGAGGTC GTTGCCTTGC TGACATCCCA CACCATCGCG
CGTTCGGACC ACGTCGTCCC TAGCTCAATG CAGGTTCCCT TTGACTCGAC GCCCTTCACT TTCGACTCCC AGATCTTCGT CGAGGTGCTG CTCAAGGGAA CCGGGTTCCC CGGAAACGGC
TCCACTTCCG ACGTCGGCCT CGGTGAGGTG GAGTCCCCCC TCCCACTAGG CTCTGGTGCC GACACTGGCG AACTCCGTTT GCAGTCAGAC TTCGCCATCG CTCGTGACGC TAGGACCGCA
TGCACGTGGC AAGGCTTCGT CAACGAGCAA GAGAAGATGG CCAACGCCTT CAAGGCAGCC ATGGCTAAAA TGGCTATTAT TGGCCACGAC CGAAATTCAC TCATCGACTG CTCTGAGGTC
ATTCCCCAAC CCGTCCCCGC CACGGGCAAG CCTGCCACAT TCCCTGCCAC AAAAACAATC GCCGACATTG ACCAGTCGTG TGCCTCCTCT CCCTTCCCGA GCCTTGCCTC CGACCCCGGT
GCGACTCAGT CCCTGATCCC TAATTGCCCG AACGACGCGT CGACCTGTAT CATATTGGCA TAG
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGGGAGGTAG AGCACAGTCC ATCACCTCAC TCAGGTTGCA CAACAGGTAG CAAGGTCTTC AGCAGTCAAC ATGGGCTTCA AAACTCTCCT TGCTTTCATC GGTGTCTCCG TGGCATCTGT
CAATGCCGCG GCTCTCAAGA GCCACACCTG TCCTGATGGC TCTAGGACGT CGAACACTGC GTGCTGCGCC TTCTTCCCTC TTCTCCAGGA CCTCCAAACG AACCTGTTTG GCGGCAACTG
CGGTGAAGAT GTCCACGAGA CACTGCGTAT TAGCTTCCAC GACGCCATTG CGTTCTCGAA GGCTCAAGGT CCAGCAGCCG GTGGAGGTGC TGATGGGTCC ATGCTCATCT TCCCCGACGT
CGAGCCCAAC TTCGTCGCGA ACAATGGTAT CAGTGACAGT GTTGCTTTCC TGACCCCCTT CCTCCAAAGG CACAACACCA TCAGTGCTGG TGACTTAATC CAGTTTGGTG CTGCCGCCGC
CATCACCAAC TGCCCGGGTG CACCCCAACT TGAGTTCTTG GCCGGACGTC CCAATGCTAC CGCCCCTGCC ATCGACGGAC TGATTCCCGA GCCCCAAGAC TCCGTCGACA GTATCTTCGC
CCGCATGCTT GATGGCGGAG ACTTCTCCCC CGATGAGGTC GTTGCCTTGC TGACATCCCA CACCATCGCG CGTTCGGACC ACGTCGTCCC TAGCTCAATG CAGGTTCCCT TTGACTCGAC
GCCCTTCACT TTCGACTCCC AGATCTTCGT CGAGGTGCTG CTCAAGGGAA CCGGGTTCCC CGGAAACGGC TCCACTTCCG ACGTCGGCCT CGGTGAGGTG GAGTCCCCCC TCCCACTAGG
CTCTGGTGCC GACACTGGCG AACTCCGTTT GCAGTCAGAC TTCGCCATCG CTCGTGACGC TAGGACCGCA TGCACGTGGC AAGGCTTCGT CAACGAGCAA GAGAAGATGG CCAACGCCTT
CAAGGCAGCC ATGGCTAAAA TGGCTATTAT TGGCCACGAC CGAAATTCAC TCATCGACTG CTCTGAGGTC ATTCCCCAAC CCGTCCCCGC CACGGGCAAG CCTGCCACAT TCCCTGCCAC
AAAAACAATC GCCGACATTG ACCAGTCGTG TGCCTCCTCT CCCTTCCCGA GCCTTGCCTC CGACCCCGGT GCGACTCAGT CCCTGATCCC TAATTGCCCG AACGACGCGT CGACCTGTAT
CATATTGGCA TAGTGGATTG CGTAGGAGGC TCCTAACTGG CCGCAGCTGA ACAGACAGAG CGGGCGGGGA TTCGATATTT AACTCCAGGG TGAATACACC CTGGTTTCGT TCGTTTTTAT
ATTTGGTGCC TTCCTGTAGC CTCTGTGAT
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Retrieve as FASTA
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