Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
854 |
| PWM (Da): |
97061.35 |
Transmb domain: |
i294-313o372-394i433-455o475-497i665-682o |
| PI (pH): |
8.92 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MSSENQGKDE SSTWILESID IVADHVEVSK KDENNGSMVT KASDNEAFLD NGSNGSNVRQ RNNNNHNASK MVRVQSGAAR GLKGLRFLDR TVTGKEGDAW KSIEKRFFQH AVGGMLFKDK
FGQCMGMGAD SKEFAGELYD ALARRRNISV ESGINLSQVK VFWEDMTSKD LESRLQVFFD MCDKNGDGRL SEDEVKEVIV LSASANRLGN LKDQASVYAA LIMEELDPDH NGYIEMWQLE
TLLKEMVNAE DGTTRLSNRT ETLTRAMIPC KYRTPIRKFV SKTTEFVYDK WKKIWIFVLW LAVNLILFIW KFLQYKEKPA YEVMGSCVCF AKGAAETLKF NMGLIVLTMC RRTLTMLRGS
FLSQIIPFDD NIHFHIVIAI GVVIGTFIHV GVHVTCDFPR IISCPTEKFM ATIGPGFNYH QPDYLTLVKS TAGVTGIFIV LIMAFTFTLA TPHFRKSIVK LPSPLHHLAG FNSFWYAHHL
LIVAYFLLII HGYFLFLTKE WKNKTTWMYL IVPLMLYAFE RTHPSFRGKD HRVSIIKAII YTGNVLALYM TKPPGFKYKS GMYIFVKCPD ISSYEWHPFS ITSAPGDDYL SVHIRTLGDW
TTELRNIFAK ACAPESAQPR RGSLVRMETR ASSNYDHSKP SIKYPKILIK GPYGAPAQSY RHYDVLLLIG LGIGATPMIS ILKDILNHMK MESPQQTLSE IESFNSSRSS SDEDKKGPER
AYFYWVTREQ ASFEWFKGVM DDIAEYDRDG VIEMHNYLTS VYEEGDARSA LIGMIQKLQH AKNGVDVVSE SRIRTHFARP NWKKVFSQLA LTHQSSRIGV FYCGSPTLTK TLKTLCQEFS
LNTSTRFQFH KENF
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Retrieve as FASTA
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| Remarks |
Psat3g140480.1 (5'end) completed from p.sativum_CSFL_reftransV2_0008640 |
CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTCATCAG AAAACCAAGG CAAAGATGAA TCATCGACAT GGATTCTTGA AAGCATTGAT ATTGTTGCTG ATCATGTGGA AGTTTCTAAA AAGGATGAAA ACAATGGAAG CATGGTCACA
AAAGCTTCAG ATAATGAAGC CTTTCTCGAC AATGGTAGCA ATGGTAGCAA TGTTAGACAG AGAAATAATA ACAATCATAA TGCAAGCAAA ATGGTTAGGG TGCAATCAGG TGCTGCAAGA
GGGCTTAAGG GTTTACGTTT TCTTGATCGA ACGGTTACCG GAAAAGAAGG CGATGCATGG AAGTCAATTG AGAAGCGTTT CTTTCAACAT GCAGTTGGTG GAATGCTGTT CAAAGACAAA
TTTGGACAAT GCATGGGTAT GGGAGCAGAT TCAAAGGAAT TTGCAGGGGA ACTGTATGAT GCATTGGCTA GGAGAAGGAA TATAAGTGTA GAAAGTGGAA TTAATTTGAG TCAAGTTAAA
GTGTTTTGGG AGGATATGAC TAGTAAAGAT CTTGAATCAA GACTTCAAGT GTTCTTTGAC ATGTGTGACA AGAATGGGGA TGGTAGGTTA TCAGAAGATG AGGTTAAGGA GGTTATAGTG
TTGAGTGCTT CTGCAAATAG ATTGGGAAAT CTCAAAGATC AAGCTTCTGT ATATGCAGCT TTGATCATGG AAGAGCTTGA TCCAGATCAT AATGGATATA TAGAGATGTG GCAGCTTGAA
ACTCTACTAA AGGAAATGGT TAATGCAGAA GATGGCACTA CGAGACTTAG TAATAGAACC GAAACACTAA CCCGAGCAAT GATACCATGC AAGTACAGAA CTCCGATTAG AAAATTCGTT
TCCAAAACAA CCGAATTTGT ATATGATAAA TGGAAAAAAA TATGGATATT CGTACTTTGG TTAGCCGTAA ACTTGATCCT TTTCATTTGG AAGTTTCTTC AATACAAGGA AAAACCAGCA
TATGAAGTAA TGGGATCATG TGTCTGTTTT GCAAAGGGTG CTGCCGAGAC TCTCAAATTC AACATGGGGC TAATCGTCCT TACAATGTGT AGAAGAACAC TTACGATGCT ACGAGGATCG
TTTCTTAGTC AAATCATCCC TTTTGACGAT AACATACACT TTCACATTGT TATTGCAATT GGTGTAGTTA TAGGGACTTT CATCCATGTA GGTGTTCATG TAACTTGTGA TTTTCCGAGA
ATTATTTCTT GTCCGACCGA AAAGTTTATG GCCACAATTG GACCCGGTTT TAATTACCAC CAGCCTGATT ACCTTACCCT TGTTAAAAGC ACTGCTGGTG TAACTGGAAT TTTCATTGTC
TTGATTATGG CTTTTACTTT CACTTTGGCA ACACCTCATT TCCGAAAAAG TATTGTCAAG TTGCCTTCAC CGTTGCATCA TTTGGCCGGC TTCAATTCGT TTTGGTATGC TCATCATTTG
CTTATTGTGG CTTACTTTCT CCTGATCATT CATGGCTACT TTCTATTTCT CACCAAGGAA TGGAAAAACA AGACGACATG GATGTACCTT ATAGTTCCAT TAATGCTCTA CGCATTTGAG
AGAACTCATC CATCTTTTAG GGGTAAAGAT CATCGCGTGA GCATCATTAA GGCAATAATA TACACAGGAA ATGTGCTAGC ACTATACATG ACGAAGCCAC CGGGATTCAA GTATAAAAGT
GGAATGTATA TTTTTGTCAA GTGTCCAGAT ATATCGAGTT ATGAATGGCA CCCTTTCTCG ATTACCTCTG CACCAGGAGA TGATTACTTG AGTGTTCATA TAAGAACCTT AGGAGATTGG
ACTACAGAAC TTAGAAACAT ATTTGCAAAG GCTTGTGCGC CTGAGAGTGC ACAACCAAGA AGGGGAAGCC TTGTGAGGAT GGAAACTAGA GCAAGTTCAA ATTATGACCA TTCAAAACCA
AGCATTAAAT ATCCAAAGAT TCTCATCAAA GGACCCTATG GAGCACCGGC ACAAAGTTAT AGGCATTATG ATGTACTCTT ACTCATAGGA CTTGGAATCG GCGCGACACC TATGATCAGT
ATTTTAAAAG ATATCTTGAA CCATATGAAG ATGGAAAGTC CCCAGCAAAC ACTTTCTGAG ATAGAATCCT TCAATAGTAG TCGCTCCAGC TCCGACGAAG ATAAGAAAGG TCCTGAAAGA
GCATATTTCT ATTGGGTAAC CAGGGAACAA GCTTCATTTG AATGGTTCAA AGGTGTCATG GATGATATTG CCGAATACGA CCGTGATGGT GTTATAGAAA TGCATAACTA TTTGACTAGT
GTCTACGAGG AAGGCGATGC AAGGTCTGCA CTTATCGGCA TGATTCAGAA GTTGCAACAC GCCAAAAATG GAGTAGACGT AGTTTCAGAA AGCCGGATAA GAACACATTT TGCAAGACCA
AACTGGAAAA AAGTCTTCTC CCAGTTAGCT TTAACGCATC AAAGCTCTCG CATCGGTGTG TTTTATTGTG GAAGTCCTAC TCTTACGAAA ACATTGAAGA CCCTTTGTCA GGAGTTTAGC
TTAAACACAT CGACACGATT TCAGTTTCAT AAAGAGAATT TTTGA
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Retrieve as FASTA
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cDNA►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TTGCATGTAG TTAATTGGTT AGAGACCATT GTATTATTAT CAACCAATTT TCCTATAATT AGCAAACCAA TAACACAACA AAATTTACAT ACTCTTCTTT CTCTCTCCCT CTCTCAAATT
CCTACTTTGA CTGATTCATC TTTCCCTCTA ATACCCTTTC TCTCAAATTC ACCTAATTAA ACAAACCTTT CTGCACAATC TTTTTCGTTG ATGTCATCAG AAAACCAAGG CAAAGATGAA
TCATCGACAT GGATTCTTGA AAGCATTGAT ATTGTTGCTG ATCATGTGGA AGTTTCTAAA AAGGATGAAA ACAATGGAAG CATGGTCACA AAAGCTTCAG ATAATGAAGC CTTTCTCGAC
AATGGTAGCA ATGGTAGCAA TGTTAGACAG AGAAATAATA ACAATCATAA TGCAAGCAAA ATGGTTAGGG TGCAATCAGG TGCTGCAAGA GGGCTTAAGG GTTTACGTTT TCTTGATCGA
ACGGTTACCG GAAAAGAAGG CGATGCATGG AAGTCAATTG AGAAGCGTTT CTTTCAACAT GCAGTTGGTG GAATGCTGTT CAAAGACAAA TTTGGACAAT GCATGGGTAT GGGAGCAGAT
TCAAAGGAAT TTGCAGGGGA ACTGTATGAT GCATTGGCTA GGAGAAGGAA TATAAGTGTA GAAAGTGGAA TTAATTTGAG TCAAGTTAAA GTGTTTTGGG AGGATATGAC TAGTAAAGAT
CTTGAATCAA GACTTCAAGT GTTCTTTGAC ATGTGTGACA AGAATGGGGA TGGTAGGTTA TCAGAAGATG AGGTTAAGGA GGTTATAGTG TTGAGTGCTT CTGCAAATAG ATTGGGAAAT
CTCAAAGATC AAGCTTCTGT ATATGCAGCT TTGATCATGG AAGAGCTTGA TCCAGATCAT AATGGATATA TAGAGATGTG GCAGCTTGAA ACTCTACTAA AGGAAATGGT TAATGCAGAA
GATGGCACTA CGAGACTTAG TAATAGAACC GAAACACTAA CCCGAGCAAT GATACCATGC AAGTACAGAA CTCCGATTAG AAAATTCGTT TCCAAAACAA CCGAATTTGT ATATGATAAA
TGGAAAAAAA TATGGATATT CGTACTTTGG TTAGCCGTAA ACTTGATCCT TTTCATTTGG AAGTTTCTTC AATACAAGGA AAAACCAGCA TATGAAGTAA TGGGATCATG TGTCTGTTTT
GCAAAGGGTG CTGCCGAGAC TCTCAAATTC AACATGGGGC TAATCGTCCT TACAATGTGT AGAAGAACAC TTACGATGCT ACGAGGATCG TTTCTTAGTC AAATCATCCC TTTTGACGAT
AACATACACT TTCACATTGT TATTGCAATT GGTGTAGTTA TAGGGACTTT CATCCATGTA GGTGTTCATG TAACTTGTGA TTTTCCGAGA ATTATTTCTT GTCCGACCGA AAAGTTTATG
GCCACAATTG GACCCGGTTT TAATTACCAC CAGCCTGATT ACCTTACCCT TGTTAAAAGC ACTGCTGGTG TAACTGGAAT TTTCATTGTC TTGATTATGG CTTTTACTTT CACTTTGGCA
ACACCTCATT TCCGAAAAAG TATTGTCAAG TTGCCTTCAC CGTTGCATCA TTTGGCCGGC TTCAATTCGT TTTGGTATGC TCATCATTTG CTTATTGTGG CTTACTTTCT CCTGATCATT
CATGGCTACT TTCTATTTCT CACCAAGGAA TGGAAAAACA AGACGACATG GATGTACCTT ATAGTTCCAT TAATGCTCTA CGCATTTGAG AGAACTCATC CATCTTTTAG GGGTAAAGAT
CATCGCGTGA GCATCATTAA GGCAATAATA TACACAGGAA ATGTGCTAGC ACTATACATG ACGAAGCCAC CGGGATTCAA GTATAAAAGT GGAATGTATA TTTTTGTCAA GTGTCCAGAT
ATATCGAGTT ATGAATGGCA CCCTTTCTCG ATTACCTCTG CACCAGGAGA TGATTACTTG AGTGTTCATA TAAGAACCTT AGGAGATTGG ACTACAGAAC TTAGAAACAT ATTTGCAAAG
GCTTGTGCGC CTGAGAGTGC ACAACCAAGA AGGGGAAGCC TTGTGAGGAT GGAAACTAGA GCAAGTTCAA ATTATGACCA TTCAAAACCA AGCATTAAAT ATCCAAAGAT TCTCATCAAA
GGACCCTATG GAGCACCGGC ACAAAGTTAT AGGCATTATG ATGTACTCTT ACTCATAGGA CTTGGAATCG GCGCGACACC TATGATCAGT ATTTTAAAAG ATATCTTGAA CCATATGAAG
ATGGAAAGTC CCCAGCAAAC ACTTTCTGAG ATAGAATCCT TCAATAGTAG TCGCTCCAGC TCCGACGAAG ATAAGAAAGG TCCTGAAAGA GCATATTTCT ATTGGGTAAC CAGGGAACAA
GCTTCATTTG AATGGTTCAA AGGTGTCATG GATGATATTG CCGAATACGA CCGTGATGGT GTTATAGAAA TGCATAACTA TTTGACTAGT GTCTACGAGG AAGGCGATGC AAGGTCTGCA
CTTATCGGCA TGATTCAGAA GTTGCAACAC GCCAAAAATG GAGTAGACGT AGTTTCAGAA AGCCGGATAA GAACACATTT TGCAAGACCA AACTGGAAAA AAGTCTTCTC CCAGTTAGCT
TTAACGCATC AAAGCTCTCG CATCGGTGTG TTTTATTGTG GAAGTCCTAC TCTTACGAAA ACATTGAAGA CCCTTTGTCA GGAGTTTAGC TTAAACACAT CGACACGATT TCAGTTTCAT
AAAGAGAATT TTTGAAGGGA CAATTCACAG AACAATTGCA TCAGTCAAGA ATTATTCGGT GTCATCTTGA TTCATCAAGC AACATAAGAT TGTAGAATAT TTTTGTATAC TCATAGTGTA
ATGTTGATAA GTTTTGTGTA TGTAGCAATA TTTCTTAAAA TTTGTGTTGG TTTTGCCTAA ATCTTCATAG TGTTGTTCAT CATTTTTATT CCTTTCAAAA AAAAAAAAAA AAAAAAAA
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Retrieve as FASTA
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