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Entry information : AtrPrx45(AmTr_v1.0_scaffold00029.227)
Entry ID 16631
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-12 (Christophe Dunand)
Peroxidase information: AtrPrx45(AmTr_v1.0_scaffold00029.227)
Name AtrPrx45(AmTr_v1.0_scaffold00029.227)
Class Class III peroxidase    [Orthogroup: Prx008]
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx45
start..stop		 S start..stop
AtrPrx28 622 0 1..322 1..322
AtrPrx60 614 0 1..322 1..322
AtrPrx30 589 0 1..322 1..325
AtrPrx[P]75 554 0 5..322 10..329
Literature and cross-references AtrPrx45(AmTr_v1.0_scaffold00029.227)
Protein sequence: AtrPrx45(AmTr_v1.0_scaffold00029.227)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   321 (295)
PWM (Da):   %s   34995.68 (32130.3)  
PI (pH):   %s   8.56 (8.93) Peptide Signal:   %s   cut: 27 range:27-321
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGSYSTGHIA TLLMILLCSM LLLCEGHQLR SNFYDSSCPN ALSTIRTAIR TAISAERRMG ASLIRLHFHD CFVNGCDASL LLDSTSSFES EQNAIQNIGS ARGFQVIEKA KSRVESICPG  VVSCADILAV AARDSSVKLG GPSWTVKLGR RDSATASKSE AERELPLFTA PLDSLISLFR RKGLSAKDLV ALSGAHTIGQ AQCFTFRDRI YNHTNIDSGF ARKRRNHCPS NGGDSKLAPL 
DLVTPNSFDN NYFKILMEKK GLLESDQVLF NGGSTDEIVR SYSKSRSAFY LDFAEAMVKM GDIEPLTGSA RQIRARCSVP N* 

Retrieve as FASTA  
Remarks Incorrect prediction from Phytozome (splicing error intron 2).
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTTCTT ACTCTACTGG CCATATAGCA ACACTGCTCA TGATACTGCT ATGTAGCATG CTGTTACTAT GTGAAGGGCA TCAGCTGAGA TCCAACTTCT ATGATTCGAG CTGCCCCAAC  GCCCTCTCTA CCATCCGCAC CGCCATTCGC ACCGCGATAT CAGCAGAGAG ACGCATGGGA GCCTCCCTTA TTCGCCTCCA CTTCCATGAT TGCTTTGTCA ATGGTTGCGA TGCATCGCTG  CTGTTGGACT CGACTTCCTC TTTCGAGAGC GAACAGAATG CCATTCAGAA CATCGGGTCT GCTAGAGGCT TCCAAGTCAT TGAAAAGGCA AAGTCGAGAG TGGAAAGCAT ATGTCCAGGT  GTGGTCTCCT GTGCCGACAT CCTTGCAGTT GCAGCAAGAG ACTCTTCTGT AAAGTTGGGA GGTCCATCGT GGACAGTAAA GCTAGGGCGA AGAGACTCTG CAACGGCAAG CAAGAGTGAG  GCAGAGAGAG AACTCCCTCT CTTCACCGCT CCCTTGGACA GTCTCATCTC TCTCTTCCGC CGAAAGGGAC TCAGTGCCAA AGATTTGGTG GCTCTCTCTG GTGCACACAC CATAGGCCAA  GCCCAGTGCT TCACATTCAG AGACAGAATT TACAACCACA CCAACATCGA CTCTGGCTTT GCTCGCAAAA GGCGTAATCA CTGCCCTTCA AATGGCGGGG ACTCGAAGCT CGCACCTCTT  GACCTTGTTA CACCCAATAG CTTCGATAAC AACTACTTCA AGATTTTGAT GGAGAAAAAG GGTTTGTTGG AATCAGATCA GGTGTTATTT AATGGTGGAT CAACTGATGA GATAGTGAGG  TCTTATAGTA AGAGTCGAAG TGCTTTCTAC TTGGATTTTG CTGAGGCTAT GGTAAAGATG GGGGATATTG AGCCTCTTAC TGGATCAGCT AGGCAGATTA GGGCCAGGTG CTCAGTGCCC 
AATTGA 

Retrieve as FASTA  
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGTTCTT ACTCTACTGG CCATATAGCA ACACTGCTCA TGATACTGCT ATGTAGCATG CTGTTACTAT GTGAAGGGCA TCAGCTGAGA TCCAACTTCT ATGATTCGAG CTGCCCCAAC  GCCCTCTCTA CCATCCGCAC CGCCATTCGC ACCGCGATAT CAGCAGAGAG ACGCATGGGA GCCTCCCTTA TTCGCCTCCA CTTCCATGAT TGCTTTGTCA ATGGTTGCGA TGCATCGCTG  CTGTTGGACT CGACTTCCTC TTTCGAGAGC GAACAGAATG CCATTCAGAA CATCGGGTCT GCTAGAGGCT TCCAAGTCAT TGAAAAGGCA AAGTCGAGAG TGGAAAGCAT ATGTCCAGGT  GTGGTCTCCT GTGCCGACAT CCTTGCAGTT GCAGCAAGAG ACTCTTCTGT AAAGTTGGGA GGTCCATCGT GGACAGTAAA GCTAGGGCGA AGAGACTCTG CAACGGCAAG CAAGAGTGAG  GCAGAGAGAG AACTCCCTCT CTTCACCGCT CCCTTGGACA GTCTCATCTC TCTCTTCCGC CGAAAGGGAC TCAGTGCCAA AGATTTGGTG GCTCTCTCTG GTGCACACAC CATAGGCCAA  GCCCAGTGCT TCACATTCAG AGACAGAATT TACAACCACA CCAACATCGA CTCTGGCTTT GCTCGCAAAA GGCGTAATCA CTGCCCTTCA AATGGCGGGG ACTCGAAGCT CGCACCTCTT  GACCTTGTTA CACCCAATAG CTTCGATAAC AACTACTTCA AGATTTTGAT GGAGAAAAAG GGTTTGTTGG AATCAGATCA GGTGTTATTT AATGGTGGAT CAACTGATGA GATAGTGAGG  TCTTATAGTA AGAGTCGAAG TGCTTTCTAC TTGGATTTTG CTGAGGCTAT GGTAAAGATG GGGGATATTG AGCCTCTTAC TGGATCAGCT AGGCAGATTA GGGCCAGGTG CTCAGTGCCC 
AATTGA 

Retrieve as FASTA