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Entry information : AtrPrx60(AmTr_v1.0_scaffold00029.228 / AmTr_v1.0_scaffold00029.229)
Entry ID 16645
Creation 2020-11-09 (Christophe Dunand)
Last sequence changes 2020-11-10 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-11-12 (Christophe Dunand)
Peroxidase information: AtrPrx60(AmTr_v1.0_scaffold00029.228 / AmTr_v1.0_scaffold00029.229)
Name AtrPrx60(AmTr_v1.0_scaffold00029.228 / AmTr_v1.0_scaffold00029.229)
Class Class III peroxidase    [Orthogroup: Prx008]
Taxonomy Eukaryota Viridiplantae Streptophyta Amborellaceae Amborella
Organism Amborella trichopoda    [TaxId: 13333 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtrPrx60
start..stop		 S start..stop
AtrPrx28 645 0 1..322 1..322
AtrPrx45 614 0 1..322 1..322
AtrPrx30 583 0 1..322 1..325
AtrPrx[P]75 554 0 5..322 10..329
Literature and cross-references AtrPrx60(AmTr_v1.0_scaffold00029.228 / AmTr_v1.0_scaffold00029.229)
Protein sequence: AtrPrx60(AmTr_v1.0_scaffold00029.228 / AmTr_v1.0_scaffold00029.229)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   321 (295)
PWM (Da):   %s   34882.55 (32077.2) Transmb domain:   %s   i7-24o
PI (pH):   %s   8.36 (8.75) Peptide Signal:   %s   cut: 27 range:27-321
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGSCSTAHIA TLLMIVLCSM LLLCEGKQLS SKFYDSSCPN AFSTIRTAIH AAISAERPMG ASLIRLHFHD CFVNGCDASL LLDSTSSFES EQNAIQNIES ARGFQVIEKA KSRVESICPG  VVSCADILAV AARDSSVKLG GPSWTVKLWR RDSATASKSE AERELPLFTT PLDSLISLFR RKGLSAKDLV ALSGAHTIGQ AQCFTFRDRI HNHTNIDSGF ARKRRNRCPS NGGDSKLAPL 
DLVTPTSFDN NYFKILMQKK GLLESDQVLF NGGSTDEIVR SYSKSRSAFY SDFAEAMVKM GDIEPLTGSA GQIRARCSVP N* 

Retrieve as FASTA  
Remarks Incorrect prediction from Phytozome (two independant predictions: scaffold00029.228 (54 end) and scaffold00029.229 (3' end))
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGCTCTT GCTCTACTGC TCATATAGCA ACACTGCTCA TGATAGTGCT ATGTAGCATG CTGTTACTAT GTGAAGGGAA GCAGCTGAGC TCCAAGTTCT ATGATTCGAG CTGCCCCAAT  GCCTTCTCTA CCATCCGCAC CGCCATTCAT GCCGCGATAT CGGCAGAGAG GCCCATGGGA GCCTCCCTTA TTCGCCTCCA CTTCCACGAT TGCTTTGTCA ATGTGAGTTC TTAATATTTA  TGTTTAACAA TTCGTATCTA TCGATCTATT AATCTATTAG TCTGAATTTC TTTTAATCTA TTTATCAAAC TCGATCTATC TTATGAATGT GGGTGATCTT AGGTGTATGG ATATCTATGT  GCAGGGTTGC GATGCATCGC TGCTGTTGGA CTCGACTTCC TCTTTCGAGA GCGAACAGAA TGCCATTCAG AACATCGAGT CTGCTAGAGG CTTCCAAGTC ATTGAAAAGG CAAAGTCGAG  AGTGGAAAGC ATATGTCCAG GTGTGGTCTC CTGTGCCGAC ATCCTTGCAG TTGCAGCAAG AGACTCTTCT GTAAAGGTAA GCATATCAAA GCTAAAGATT AGCAGTTAAG AGCATGGGTT  CGAGTGCGAT CACTTTGTGC ATAAAAAACT AAAGATTAAC AGTTAGGACC GTTTCCATCT CACCCCTCCC CCTGCATACG TGGAAGCGAC ACCAAGGCCT TTCTAGTCTC ATTGTTCATG  ATTGAGGCTT ATAATTTTCA AGAGGATATT TCTAGTCTCA TTGTTCATGA TTGAGGCTTA TAATTTTCAA AAGGATAAAT ATATATAATT ATGATCGCAA TTAACTTTGG CTATTAGATC  TAAAATCGGT TAGATGTAGG TCTCCTATTA ATCGGGCTCA AAGTTCTAAA TGAAGTTTTC AAACTTTATA ATATAATATA CCTCAGGCTA TTAGATGTCA TATCGGACAG CTACATATAT  GATTGTGACC TTGTACGATT GCTAAAATAA AGAAAAAGTC TGTTTTTACT AATTTACTAC TTCTCCCAAA TTAAACAAGT TTATTGCATG TCTTAAACCA AGATTCAAGG CAAAGCAGTC  ATCCAAAATA AGTCATAAAA ATATTCATCC AAAATCGGTT TGAAGGGGTC AAAATATCAT CCTAACATTC GAAAACTGAT ATAGAAATAA ACTATATGCA GTTGGGAGGT CCATCGTGGA  CTGTAAAGCT ATGGCGAAGA GACTCTGCAA CGGCAAGCAA GAGTGAGGCA GAGAGAGAAC TCCCTCTCTT CACCACTCCC TTGGACAGTC TCATCTCTCT CTTCCGCAGA AAGGGACTCA  GTGCCAAAGA CTTGGTGGCT CTCTCTGGTG CACACACCAT AGGCCAAGCC CAGTGCTTCA CATTCAGAGA CAGAATTCAC AACCACACCA ACATCGACTC TGGCTTTGCT CGCAAAAGGC  GTAATCGCTG CCCTTCAAAT GGTGGGGACT CGAAGCTCGC ACCGCTTGAC CTTGTTACAC CCACTAGCTT CGACAACAAC TACTTCAAGA TTTTGATGCA GAAAAAGGGT TTGTTGGAAT  CAGATCAGGT GCTGTTTAAT GGTGGATCAA CTGATGAGAT AGTGAGGTCA TATAGTAAGA GTCGCAGTGC TTTCTACTCG GATTTTGCGG AGGCTATGGT GAAGATGGGG GATATTGAGC  CTCTTACTGG ATCAGCTGGG CAGATTAGGG CAAGGTGCTC CGTGCCCAAT TGATTGATTC TTGATAGGGA TTGTGGTTTA TGTTATTAAT TTGTTCTTTT TTAGACGAGG CCCTTTGTAA 
TTGTATATTG TGGGGGCCTA TGTGCTTCTC ATT 

Retrieve as FASTA  
CDS►
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGCTCTT GCTCTACTGC TCATATAGCA ACACTGCTCA TGATAGTGCT ATGTAGCATG CTGTTACTAT GTGAAGGGAA GCAGCTGAGC TCCAAGTTCT ATGATTCGAG CTGCCCCAAT  GCCTTCTCTA CCATCCGCAC CGCCATTCAT GCCGCGATAT CGGCAGAGAG GCCCATGGGA GCCTCCCTTA TTCGCCTCCA CTTCCACGAT TGCTTTGTCA ATGGTTGCGA TGCATCGCTG  CTGTTGGACT CGACTTCCTC TTTCGAGAGC GAACAGAATG CCATTCAGAA CATCGAGTCT GCTAGAGGCT TCCAAGTCAT TGAAAAGGCA AAGTCGAGAG TGGAAAGCAT ATGTCCAGGT  GTGGTCTCCT GTGCCGACAT CCTTGCAGTT GCAGCAAGAG ACTCTTCTGT AAAGTTGGGA GGTCCATCGT GGACTGTAAA GCTATGGCGA AGAGACTCTG CAACGGCAAG CAAGAGTGAG  GCAGAGAGAG AACTCCCTCT CTTCACCACT CCCTTGGACA GTCTCATCTC TCTCTTCCGC AGAAAGGGAC TCAGTGCCAA AGACTTGGTG GCTCTCTCTG GTGCACACAC CATAGGCCAA  GCCCAGTGCT TCACATTCAG AGACAGAATT CACAACCACA CCAACATCGA CTCTGGCTTT GCTCGCAAAA GGCGTAATCG CTGCCCTTCA AATGGTGGGG ACTCGAAGCT CGCACCGCTT  GACCTTGTTA CACCCACTAG CTTCGACAAC AACTACTTCA AGATTTTGAT GCAGAAAAAG GGTTTGTTGG AATCAGATCA GGTGCTGTTT AATGGTGGAT CAACTGATGA GATAGTGAGG  TCATATAGTA AGAGTCGCAG TGCTTTCTAC TCGGATTTTG CGGAGGCTAT GGTGAAGATG GGGGATATTG AGCCTCTTAC TGGATCAGCT GGGCAGATTA GGGCAAGGTG CTCCGTGCCC 
AATTGA 

Retrieve as FASTA