Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
358 (327) |
PWM (Da): |
39921.03 (36418.2) |
Transmb domain: |
i7-29o |
PI (pH): |
7.33 (7.05) |
Peptide Signal: |
cut: 32 range:32-358 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MARLWRLNSL SCASVSILVF VLLLNAMDVS CDDYLVPGYY RDSCPLVEDI VRRHVLMAIR KDPRMAASLL RLHFHDCFVM GCDGSVLLDS RGSIESEKGA DPNVNSVKGF EVVDSIKFAL
EIACPAIVSC ADILAMAARD SVVLRGGPNW DVYLGRRDSL TASFSGANKF IPLPNSTLQT LITNFQAQGL DPLDLVTLSG SHTIGYSRCL NFRQHIYSPL EQDEEEYAEG STPDYCSQQK
KRKSKPDPVF RRILRSTCPI TGRDNSLTPL DYSTSVFFDN HYFLNLMQGK ALLQSDSSLL SSTYTKELVW AYASNPRLFY RKFASSMVKM GNINPLIGDQ GEIRQNCRFV NSQSLTSP*
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Retrieve as FASTA
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Remarks |
Incorrect prediction from Phytozome. Two independant and partial ORFs: AmTr_v1.0_scaffold00149.18 (5' end) and AmTr_v1.0_scaffold00149.19 (3' end). |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTCGTC TTTGGAGGCT CAACTCTCTC AGTTGTGCTT CTGTTTCTAT ATTAGTTTTT GTGCTTCTTT TGAATGCCAT GGACGTTTCA TGTGACGATT ACCTGGTTCC TGGCTACTAT
AGAGACTCAT GCCCCCTTGT GGAGGACATT GTGAGAAGAC ATGTCCTCAT GGCTATACGC AAAGATCCTC GCATGGCTGC ATCGCTACTT CGACTCCACT TTCATGATTG CTTCGTCATG
GTCTCTCTCT CTCTCACACA CGTACACACA CATATACACG CTCACTCATT TCACTATAAA TCGAGCCATG GACATCAATA ATGTTGCTCT TAATCCTAAA TAATTAGCCA TGATAGTTGC
TTGGTCATTT GGCGTCTCTC TCTCTCACAC AAACACATGC TCCCCACACA TACACGCATG CAAACATGTA CACATGTATC TAGAATTTGA GCTTTGGACA TCAGGAATGT GGCCCTTACA
CCTTAACTAC TTAGCCATGA CAAATTTCAC ATCTCTCTCT GTGGGGTGTG TGCGTGTGTG TTTTGACATG CATACGAAAG GCAGGGGTGT GATGGATCGG TGTTACTAGA CAGCAGAGGG
AGCATAGAGA GTGAGAAGGG GGCCGATCCC AACGTTAATT CAGTCAAAGG ATTCGAGGTG GTGGATTCTA TCAAATTTGC ATTGGAGATT GCATGCCCAG CTATTGTTTC TTGTGCCGAT
ATCTTGGCCA TGGCTGCTCG CGACTCCGTC GTCCTGGTAA AAACTTTTAG AGGATAAATT CATGGATGTG CTAGATATAG AGATACCTTC TTTTTCTTTT CCCACTTGGA AAGAAGTGCG
TAAGCAGGGA TTTGTTTTTT GACAAATTGG TAAGTAGGGA TTTTAAGTAG AGGTCTAAAA ATCAGATCAG TGCTACGGAT TCTTGATTCA CCAGTACGGA TCGGCAATCC AGAGCAGTGT
ACTATATGAC TTAGAAAAAA CAAAAAGATT TTCAACACTC GCAGGAATAG GGCGGCTTTG AGCTTCCCTA CACCTGGTCA TTCCCTCCAT TGTTTTGAAT CAATCCGGCG TTTTTCGCCC
CATCAATTTT TTGAAACCCT GACTTGAAGT GTTCAGACTT TGAATATTTT GTCCCATTAG GCCAGGAAAC GTGATTCAAC TAACGTATGG CTTGTGGTTG TTTTCTATTG ACATGTAGAG
AGGAGGGCCC AATTGGGATG TATACTTGGG GAGAAGGGAT TCTCTAACTG CAAGCTTCAG TGGCGCTAAT AAATTCATCC CATTACCGAA TTCCACCCTC CAAACTCTCA TCACCAACTT
CCAAGCTCAA GGTCTGGACC CTCTAGATCT AGTAACACTA TCCGGTACTC TCTCTCTCTC TCTCACGCAC ATACACAAAC ACATAGGATA TAGCGATATC AATGTTATCA ACCTCCAATT
GGCCATGGAA CCAGTTTGAG GATCAATACC GGTTCGGATG CTAAATTAAA TAAAGAAAAA TAGTAAGAAT GACTTAAATA TATGAAATAT ATTAATAAAA GTTGTCCAAC ATTGTTTGGT
CAATCTAACT GATAAAAAAT GAGTGTCCAA TTGGTTGAAA CCCATCAATA GTTCATTTTG TCAGTTTTAG TTTTGAACTT GGCCCACCAA GGCATCGGTT GGGAATCCAA AGGGTTGGAC
AAACCAGGCT AATTTGGTCT TGATAACATT GGTCAATACT CATTACTGCA ATATGCCCAA ATATCTTTGT TTCTAGCAAT TACATTTGTC AACAGTTAAT TGTTAAATTG CTCCTTGGAA
TTTAGTCTAG CAAAAACAAC CCAAAAGAAA AGTATTTTGA ATCCAAAATT CCAAATTCTC TTTTCTGACT CAAAATTCAG AAGTAAAACC AACGTTGTGA AGCTGGATGA AATCAACAGG
GAGCCATACA ATTGGCTACT CAAGGTGCTT GAACTTTAGA CAACATATCT ATTCCCCACT AGAACAAGAT GAAGAAGAAT ATGCAGAAGG AAGCACGCCA GACTACTGTT CTCAACAAAA
AAAGAGAAAA AGCAAGCCAG ACCCTGTCTT TCGAAGAATT TTGCGCTCGA CATGCCCGAT TACAGGGAGG GACAACAGTC TAACGCCATT AGACTATTCA ACTTCGGTTT TCTTTGACAA
TCATTACTTC CTGAACCTCA TGCAAGGGAA GGCTCTTTTA CAGTCTGATA GCTCCCTCCT CTCTTCAACG TACACAAAGG AGCTAGTGTG GGCCTATGCA TCGAACCCAC GCCTCTTTTA
CAGAAAGTTT GCATCATCCA TGGTGAAGAT GGGAAACATC AACCCTCTCA TTGGAGACCA GGGAGAGATA CGACAAAATT GTCGATTCGT GAACTCGCAG AGTTTGACGA GCCCATAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTCGTC TTTGGAGGCT CAACTCTCTC AGTTGTGCTT CTGTTTCTAT ATTAGTTTTT GTGCTTCTTT TGAATGCCAT GGACGTTTCA TGTGACGATT ACCTGGTTCC TGGCTACTAT
AGAGACTCAT GCCCCCTTGT GGAGGACATT GTGAGAAGAC ATGTCCTCAT GGCTATACGC AAAGATCCTC GCATGGCTGC ATCGCTACTT CGACTCCACT TTCATGATTG CTTCGTCATG
GGGTGTGATG GATCGGTGTT ACTAGACAGC AGAGGGAGCA TAGAGAGTGA GAAGGGGGCC GATCCCAACG TTAATTCAGT CAAAGGATTC GAGGTGGTGG ATTCTATCAA ATTTGCATTG
GAGATTGCAT GCCCAGCTAT TGTTTCTTGT GCCGATATCT TGGCCATGGC TGCTCGCGAC TCCGTCGTCC TGAGAGGAGG GCCCAATTGG GATGTATACT TGGGGAGAAG GGATTCTCTA
ACTGCAAGCT TCAGTGGCGC TAATAAATTC ATCCCATTAC CGAATTCCAC CCTCCAAACT CTCATCACCA ACTTCCAAGC TCAAGGTCTG GACCCTCTAG ATCTAGTAAC ACTATCCGGG
AGCCATACAA TTGGCTACTC AAGGTGCTTG AACTTTAGAC AACATATCTA TTCCCCACTA GAACAAGATG AAGAAGAATA TGCAGAAGGA AGCACGCCAG ACTACTGTTC TCAACAAAAA
AAGAGAAAAA GCAAGCCAGA CCCTGTCTTT CGAAGAATTT TGCGCTCGAC ATGCCCGATT ACAGGGAGGG ACAACAGTCT AACGCCATTA GACTATTCAA CTTCGGTTTT CTTTGACAAT
CATTACTTCC TGAACCTCAT GCAAGGGAAG GCTCTTTTAC AGTCTGATAG CTCCCTCCTC TCTTCAACGT ACACAAAGGA GCTAGTGTGG GCCTATGCAT CGAACCCACG CCTCTTTTAC
AGAAAGTTTG CATCATCCAT GGTGAAGATG GGAAACATCA ACCCTCTCAT TGGAGACCAG GGAGAGATAC GACAAAATTG TCGATTCGTG AACTCGCAGA GTTTGACGAG CCCATAG
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Retrieve as FASTA
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