Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
373 (354) |
PWM (Da): |
40876.76 (38831.6) |
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PI (pH): |
7.62 (7.27) |
Peptide Signal: |
cut: 20 range:20-373 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MATIRLLLFL LLSTSMAIGL RVGYYSGTCP QAESTVRKVM ERAMRREARS GASVMRLQFH DCFVNGCDAS LLLDDTPTML GEKLALSNIN SLRSYEVIDE IKEKLEVICP GVVSCADIII
MAAREAVALS GGPCWDVSLG RKDGLSASQE ASNKIMPSPR SNATYLIQLF QGFNLSIENL VALSGSHSIG DGRCFSIVFR LYNQSGTGRP DPTINPVFRE VLDKLCPLGE DGNITGGLDT
TPIVFDNQYF KDLVNGKGFL NSDQVLFSTD ERTRKWVVKF SRNQDKFFSS FVEGMVKLGS LPPATPDGEV RRNCRRVNKP VDEALLESLS SNNVDDMRNH IKSHVKQSLG SSRLADRPNQ
ECIGKSFLVS GIQ
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Retrieve as FASTA
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Remarks |
Incorrect prediction, first exon and start of the second are missing. Eurfer_2_5066565_5068036_g07322.t1_1_CDS_2836127195_11260 |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCACCA TCCGTCTGCT GCTTTTCCTC CTGTTGTCCA CATCCATGGC GATCGGCCTG CGAGTAGGCT ACTACTCAGG GACCTGCCCC CAAGCAGAGA GCACGGTGAG GAAGGTGATG
GAGAGGGCCA TGAGAAGGGA GGCCAGGAGT GGAGCCTCAG TCATGCGCTT GCAGTTCCAC GACTGTTTTG TCAACGTCCG TTGCGCAAAC ATGCTAGCTT CTCCATTTAT GTTTCTTCCG
CTAATTTCTG TTCCTCATGC TGCCAGCATG TCTCTGATTT CTTAGGGCTG TGATGCTTCT CTGTTACTAG ACGACACGCC CACCATGCTA GGTGAGAAGC TTGCTCTCTC CAACATAAAC
TCCCTGAGAT CGTATGAAGT TATTGATGAA ATCAAGGAGA AACTAGAGGT GATCTGCCCA GGCGTAGTTT CCTGTGCGGA TATCATCATC ATGGCAGCAA GGGAAGCTGT TGCTCTGGTA
ATCTCTGCAG TTGTTTGTGC ATGCCTGCTT TTTCATGTGA AATACAAAAG AAACTAGACG GCACTGGCTA CCGAGCTGAA TGCGCTCATT AATGAACAAC GATAGTATAT CTGAAACAGT
TGTTTTCACT GTGGCCATTA TTTTAAAATT TAAAGTAAAG GCCATCTGCT TTCACTGTAA ATTGTTGGTA GCTTGGTAAT CAGCAACCAT TTGGGTTCAT CAGTATCTAG CCCTCTTTTT
TCAAAATAAA AGAAAAGAAA ACTTTCCAAC TACCTCCTTC CTGAAAGTAC TGATCTCTTT TATGAGGGAG AAAGACAAAA AGAAAAGAAA ATTTTCGTGC TTACGATCTG TCAATATTCT
TTGATCTTTT GATCTCTTGG AAAATGATGT TTCATTTTTA TATGTATTAG AGAATAGACT TTCTCACGCT TCTTATTTAC CTACTCGTAC TCGATAATCA CGTATAAGTA ATTTTTGTCA
CGGACATCAT CAAAATTAAT AGGCTTTCGA GTAGATCAAA GTGTTTTGAG TTTCATATAA TGAAGAGTAT CTGTGACTGA GCCATGTCCT AAACTAAGCA GAGCGGCGGT CCATGTTGGG
ATGTTTCACT GGGGAGAAAA GACGGTCTTT CTGCAAGCCA AGAAGCATCA AACAAGATCA TGCCCAGCCC ACGCTCCAAT GCGACCTATT TGATCCAACT CTTCCAAGGA TTCAATCTCT
CGATAGAAAA CCTGGTGGCA CTTTCTGGGT CACACTCCAT CGGCGACGGG CGGTGCTTCT CCATCGTCTT CCGCCTATAC AATCAATCTG GAACTGGCCG TCCTGATCCA ACCATCAACC
CAGTCTTCCG GGAGGTGCTT GACAAACTCT GCCCTCTTGG TGAGGATGGA AATATCACAG GTGGTCTTGA TACCACTCCC ATTGTCTTCG ACAATCAGTA TTTCAAGGAC CTGGTCAATG
GAAAAGGCTT TCTTAATTCA GATCAGGTGT TATTTTCCAC CGATGAACGA ACCCGAAAAT GGGTGGTTAA ATTCAGCCGG AACCAGGACA AATTCTTTTC ATCATTCGTA GAAGGGATGG
TCAAACTCGG GAGCCTGCCG CCGGCAACAC CAGATGGAGA GGTGCGACGT AATTGCAGAC GTGTTAACAA GCCAGTTGAC GAAGCCCTCC TGGAATCTTT GTCATCAAAC AACGTTGATG
ACATGCGTAA TCATATTAAA AGCCATGTCA AGCAAAGCCT TGGAAGCAGT AGGCTAGCAG ATCGGCCTAA CCAGGAATGC ATTGGAAAAT CTTTCTTGGT ATCAGGAATA CAATGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCACCA TCCGTCTGCT GCTTTTCCTC CTGTTGTCCA CATCCATGGC GATCGGCCTG CGAGTAGGCT ACTACTCAGG GACCTGCCCC CAAGCAGAGA GCACGGTGAG GAAGGTGATG
GAGAGGGCCA TGAGAAGGGA GGCCAGGAGT GGAGCCTCAG TCATGCGCTT GCAGTTCCAC GACTGTTTTG TCAACGGCTG TGATGCTTCT CTGTTACTAG ACGACACGCC CACCATGCTA
GGTGAGAAGC TTGCTCTCTC CAACATAAAC TCCCTGAGAT CGTATGAAGT TATTGATGAA ATCAAGGAGA AACTAGAGGT GATCTGCCCA GGCGTAGTTT CCTGTGCGGA TATCATCATC
ATGGCAGCAA GGGAAGCTGT TGCTCTGAGC GGCGGTCCAT GTTGGGATGT TTCACTGGGG AGAAAAGACG GTCTTTCTGC AAGCCAAGAA GCATCAAACA AGATCATGCC CAGCCCACGC
TCCAATGCGA CCTATTTGAT CCAACTCTTC CAAGGATTCA ATCTCTCGAT AGAAAACCTG GTGGCACTTT CTGGGTCACA CTCCATCGGC GACGGGCGGT GCTTCTCCAT CGTCTTCCGC
CTATACAATC AATCTGGAAC TGGCCGTCCT GATCCAACCA TCAACCCAGT CTTCCGGGAG GTGCTTGACA AACTCTGCCC TCTTGGTGAG GATGGAAATA TCACAGGTGG TCTTGATACC
ACTCCCATTG TCTTCGACAA TCAGTATTTC AAGGACCTGG TCAATGGAAA AGGCTTTCTT AATTCAGATC AGGTGTTATT TTCCACCGAT GAACGAACCC GAAAATGGGT GGTTAAATTC
AGCCGGAACC AGGACAAATT CTTTTCATCA TTCGTAGAAG GGATGGTCAA ACTCGGGAGC CTGCCGCCGG CAACACCAGA TGGAGAGGTG CGACGTAATT GCAGACGTGT TAACAAGCCA
GTTGACGAAG CCCTCCTGGA ATCTTTGTCA TCAAACAACG TTGATGACAT GCGTAATCAT ATTAAAAGCC ATGTCAAGCA AAGCCTTGGA AGCAGTAGGC TAGCAGATCG GCCTAACCAG
GAATGCATTG GAAAATCTTT CTTGGTATCA GGAATACAAT GA
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Retrieve as FASTA
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