Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
352 (333) |
PWM (Da): |
38961.5 (36910.4) |
Transmb domain: |
i37-56o |
PI (pH): |
5.74 (5.46) |
Peptide Signal: |
cut: 20 range:20-352 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MATTRLMLFL LLSTSMAIGL QVGYYSDICP QAESTVRKVM ERAMRREVRS GASIMRLQFH DCFVNGCDAS LLLDDTPTML GEKLALSNIN SLRSYEVIDE IKEELEEICP GVVSCADIII
MAARDAVALS GGPCWDVSLG RKDSLSASQE ASNKIMPSPR SNATYLIQLF QRFNLSIENL VALSGSHSIG DGRCFSIVFR LYNQSGTGRP DPTINPAFRE VLDKLCPLGG DGNITGGLDT
TPVVFDNQYF KDLVNGKGFL NSDQVLFSTD ERTRKWVVKF SRDQDKFFSS FVEGMIKLGS LPPATPDGEV RRNCRCVNKP VDEAFLESLT FNNVDDMRNH IKSHVKQGHW KL
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Retrieve as FASTA
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Remarks |
Incorrect prediction, very long sequence (extra exon in 5'). Eurfer_3_2612577_2620686_g03664.t1_-1_CDS_2836168649_28843 |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCACCA CCCGTCTGAT GCTTTTCCTC CTGTTGTCGA CATCCATGGC GATCGGCCTG CAGGTAGGCT ACTACTCCGA CATCTGCCCC CAAGCAGAGA GCACGGTGAG GAAGGTGATG
GAGAGGGCCA TGCGAAGGGA GGTCAGGAGT GGAGCCTCAA TCATGCGGTT GCAGTTCCAT GACTGCTTTG TCAACGTCCG TAGCTTAAAA AGTGCTAGCT TCTCCTTCGT TTCTGTTTCT
CCCGTTAATT TCTGTTTCTC ATGCTTCCAG CATGTCTCTG ATTTTTTAGG GCTGTGATGC TTCTCTGTTA CTGGACGACA CACCCACCAT GCTAGGTGAG AAGCTCGCTC TCTCCAACAT
AAACTCTCTG AGATCGTATG AAGTTATTGA TGAAATCAAA GAGGAACTAG AGGAGATCTG CCCAGGTGTG GTTTCCTGTG CGGATATCAT CATCATGGCA GCAAGGGATG CTGTTGCTCT
GGTAATCTCT ATAGTTTTTT GTGCATGTTT TTTTATATAT GAAATACAGA AGAAACTAGA CGGCACTGGC TACCGAGTTG AATGCGCTCC TTAATGAACA ACGATAATAT ATCTGAAACT
GTTGTTTTCA CTGTGGCCAT TATTTTAAAA TTTAAATTAA AGGCCATCTG CTTGCACTGT AAATTGTTGG TAGCTTGGTA ATCAGCAACT TTTTTGGGTT CATCAGTATC TAGCTCCCTT
TTTTTCTTTG AACTACCTCC TTTCCTGAAA GTACTAAAGA TCTCTTTTAT GAGGGGGAGA GAAACAAAAA GAAAAGGAAT TTTGTGTGCA TACAACCTGT CAATAATCTC TGATCTCTTG
GATTTTTTAT ATATATATCA GATAATAGAC TTCCTCATGA TCCTTTTTTA CCTACTCGTA CTCAATAATC ACATTTAAGT AAATTTTGTC ACGGATAACA TCAAACTTAA TAGGCTTTCG
AATAGATCAA AGTATTTGAG TTATATAATG CAGAGTATCT GTGACTGAGC CATGTTCTAA ACTAAGCAGA GCGGCGGTCC ATGTTGGGAT GTTTCACTGG GGAGAAAAGA CAGTCTTTCT
GCAAGCCAAG AAGCATCAAA CAAGATCATG CCCAGCCCAC GCTCTAATGC GACATATTTG ATCCAACTCT TCCAAAGATT CAATCTCTCG ATAGAAAACC TGGTGGCACT TTCTGGGTCA
CACTCCATCG GCGACGGGCG GTGCTTCTCC ATCGTCTTCC GCCTATACAA TCAATCTGGA ACCGGCCGTC CTGATCCAAC CATCAACCCA GCCTTCCGGG AGGTGCTTGA CAAACTCTGC
CCTCTTGGTG GGGATGGAAA TATCACAGGT GGTCTTGATA CCACTCCTGT TGTCTTCGAC AATCAGTACT TCAAGGACCT GGTCAATGGG AAAGGCTTTC TTAATTCTGA TCAGGTGTTA
TTTTCCACCG ATGAACGAAC CCGTAAATGG GTGGTCAAGT TCAGCCGGGA CCAGGACAAG TTCTTTTCAT CTTTCGTAGA AGGGATGATC AAACTCGGGA GCCTACCGCC GGCAACACCA
GATGGAGAAG TTCGACGTAA TTGCAGATGT GTTAACAAGC CAGTTGATGA AGCCTTCCTG GAATCTTTAA CATTCAACAA CGTTGATGAC ATGCGTAATC ATATTAAAAG TCATGTCAAG
CAAGGGCATT GGAAGCTGTA G
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCACCA CCCGTCTGAT GCTTTTCCTC CTGTTGTCGA CATCCATGGC GATCGGCCTG CAGGTAGGCT ACTACTCCGA CATCTGCCCC CAAGCAGAGA GCACGGTGAG GAAGGTGATG
GAGAGGGCCA TGCGAAGGGA GGTCAGGAGT GGAGCCTCAA TCATGCGGTT GCAGTTCCAT GACTGCTTTG TCAACGGCTG TGATGCTTCT CTGTTACTGG ACGACACACC CACCATGCTA
GGTGAGAAGC TCGCTCTCTC CAACATAAAC TCTCTGAGAT CGTATGAAGT TATTGATGAA ATCAAAGAGG AACTAGAGGA GATCTGCCCA GGTGTGGTTT CCTGTGCGGA TATCATCATC
ATGGCAGCAA GGGATGCTGT TGCTCTGAGC GGCGGTCCAT GTTGGGATGT TTCACTGGGG AGAAAAGACA GTCTTTCTGC AAGCCAAGAA GCATCAAACA AGATCATGCC CAGCCCACGC
TCTAATGCGA CATATTTGAT CCAACTCTTC CAAAGATTCA ATCTCTCGAT AGAAAACCTG GTGGCACTTT CTGGGTCACA CTCCATCGGC GACGGGCGGT GCTTCTCCAT CGTCTTCCGC
CTATACAATC AATCTGGAAC CGGCCGTCCT GATCCAACCA TCAACCCAGC CTTCCGGGAG GTGCTTGACA AACTCTGCCC TCTTGGTGGG GATGGAAATA TCACAGGTGG TCTTGATACC
ACTCCTGTTG TCTTCGACAA TCAGTACTTC AAGGACCTGG TCAATGGGAA AGGCTTTCTT AATTCTGATC AGGTGTTATT TTCCACCGAT GAACGAACCC GTAAATGGGT GGTCAAGTTC
AGCCGGGACC AGGACAAGTT CTTTTCATCT TTCGTAGAAG GGATGATCAA ACTCGGGAGC CTACCGCCGG CAACACCAGA TGGAGAAGTT CGACGTAATT GCAGATGTGT TAACAAGCCA
GTTGATGAAG CCTTCCTGGA ATCTTTAACA TTCAACAACG TTGATGACAT GCGTAATCAT ATTAAAAGTC ATGTCAAGCA AGGGCATTGG AAGCTGTAG
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Retrieve as FASTA
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