Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
320 (296) |
PWM (Da): |
34064.79 (31490.4) |
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PI (pH): |
4.4 (4.22) |
Peptide Signal: |
cut: 25 range:25-320 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MASFCAHALV LVSILILLRN NSHAQLIPDF YQDSCPDLPS IVQAQVEAAV NNEQRMGASL LRLFFHDCFV NGCDGSILLD DTPTFVGEKN AAPNANSVRG FEVIDAIKAA VEEACPGLVS
CADILAITAR DSVVQLGGPN WEVKLGRRDA MTASQAAANS SIPPPTSSLS QLISSYATQG LSAQDMVALS GAHTIGQARC TTFRSRIYQE ANIDSSFANT IKPNCPGIPG QGDNNLAPLD
IQTPTLFDNS YFVNLIANAG LLHSDQELFN GGSTDTIVQN YSENPDAFIQ DFVTAMIKMG DIKPLTGCDG EIRTNCRRVN
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Retrieve as FASTA
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Remarks |
Incorrect prediction, two ORFs, the second is partial . Eurfer_16_14211222_14218693_g01247.t1_-1_CDS_2836112651_11212 |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCCT TCTGTGCACA TGCACTCGTC TTGGTCTCCA TTTTAATCCT TCTCAGGAAT AATTCCCATG CTCAGCTCAT CCCTGATTTC TACCAAGATT CCTGCCCCGA CCTCCCCTCC
ATAGTTCAGG CTCAGGTTGA GGCTGCTGTT AACAACGAGC AGAGGATGGG GGCTTCTCTG CTTCGACTCT TCTTCCATGA TTGCTTTGTT AATGTACTGA GCCTTCTCAA CCTGCAAGTT
CCCTTTGCTA GTAAACAAAT TTGTTTTGTT TTTATATGTT CCTTTTGCAA GTTAGTTGTT TTGTCAGGCC TACTTAGTAC TCTCATATAT CTTTTTTCTG TTGTATATTA ACAGACTTAT
TGACTGCATT TTGCTTATAT GGCGCAGGGA TGTGATGGCT CTATTCTTCT GGATGATACC CCGACCTTCG TTGGAGAGAA GAATGCAGCT CCAAATGCAA ATTCTGTCAG AGGGTTTGAG
GTGATTGACG CCATTAAGGC TGCAGTGGAG GAGGCGTGTC CTGGACTTGT CTCCTGCGCT GACATCTTAG CCATCACCGC TAGAGACTCG GTTGTTCAGG TGAGAGGCTA ATAAAATAAA
TACCATCACC TGCATCTCAT TCCGAAGGGG CAGGTTTCCA TTTGGTTTTC GTTTTTTTCC ACTTTTATTA AAGGTAAAAA GTTATTTAAT TAACTTTTTT TTCGCCTTGT GAATTTTGTT
CAATAGAAAG CTCCTTTTCC TTTTGATTAT CTTAAATCTA AATGGTTATG TATTGAAACT GCTCAGGATC AAGATTGACA CTTCTTTTCT CTTAGACATA AACCAATGAA TGGCGGGTAC
TTAATATGCG GAAATATGAG AAAAAAATTT ATGGAAAGTA TTCATGTGAA TTGACTGCAT CAATGTTGAA ACAGTTGGGA GGCCCTAATT GGGAAGTGAA GCTTGGGAGG AGGGATGCCA
TGACAGCCAG CCAAGCAGCA GCTAACAGCA GTATCCCACC TCCCACAAGT AGCCTTAGTC AACTCATCTC TAGCTACGCA ACGCAAGGGC TATCTGCACA AGATATGGTT GCCCTTTCAG
GTGCTCATTC ATCTCTCTTT GTATCTATTG CTCTCTGTAA GTAACTTGTA TTTCCTTATT AACACCCCGA GTGAAAGCAG GGGCTCATAC CATTGGCCAA GCAAGGTGCA CCACCTTCAG
AAGTCGCATT TACCAAGAAG CTAACATCGA TAGCTCCTTC GCTAACACAA TAAAGCCGAA CTGCCCAGGC ATACCAGGGC AAGGAGACAA TAATTTGGCA CCGCTGGACA TCCAAACCCC
AACACTCTTT GACAACAGCT ACTTCGTCAA CCTGATCGCC AATGCGGGGC TCCTTCATTC AGACCAGGAG CTCTTTAATG GCGGATCCAC GGACACCATT GTTCAGAACT ACAGTGAAAA
CCCAGACGCC TTCATCCAGG ACTTCGTCAC AGCCATGATC AAGATGGGGG ACATCAAGCC TCTTACTGGC TGCGATGGAG AAATCAGGAC CAACTGCAGG CGGGTGAACT AG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCTTCCT TCTGTGCACA TGCACTCGTC TTGGTCTCCA TTTTAATCCT TCTCAGGAAT AATTCCCATG CTCAGCTCAT CCCTGATTTC TACCAAGATT CCTGCCCCGA CCTCCCCTCC
ATAGTTCAGG CTCAGGTTGA GGCTGCTGTT AACAACGAGC AGAGGATGGG GGCTTCTCTG CTTCGACTCT TCTTCCATGA TTGCTTTGTT AATGGATGTG ATGGCTCTAT TCTTCTGGAT
GATACCCCGA CCTTCGTTGG AGAGAAGAAT GCAGCTCCAA ATGCAAATTC TGTCAGAGGG TTTGAGGTGA TTGACGCCAT TAAGGCTGCA GTGGAGGAGG CGTGTCCTGG ACTTGTCTCC
TGCGCTGACA TCTTAGCCAT CACCGCTAGA GACTCGGTTG TTCAGTTGGG AGGCCCTAAT TGGGAAGTGA AGCTTGGGAG GAGGGATGCC ATGACAGCCA GCCAAGCAGC AGCTAACAGC
AGTATCCCAC CTCCCACAAG TAGCCTTAGT CAACTCATCT CTAGCTACGC AACGCAAGGG CTATCTGCAC AAGATATGGT TGCCCTTTCA GGGGCTCATA CCATTGGCCA AGCAAGGTGC
ACCACCTTCA GAAGTCGCAT TTACCAAGAA GCTAACATCG ATAGCTCCTT CGCTAACACA ATAAAGCCGA ACTGCCCAGG CATACCAGGG CAAGGAGACA ATAATTTGGC ACCGCTGGAC
ATCCAAACCC CAACACTCTT TGACAACAGC TACTTCGTCA ACCTGATCGC CAATGCGGGG CTCCTTCATT CAGACCAGGA GCTCTTTAAT GGCGGATCCA CGGACACCAT TGTTCAGAAC
TACAGTGAAA ACCCAGACGC CTTCATCCAG GACTTCGTCA CAGCCATGAT CAAGATGGGG GACATCAAGC CTCTTACTGG CTGCGATGGA GAAATCAGGA CCAACTGCAG GCGGGTGAAC
TAG
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Retrieve as FASTA
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