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Entry information : PbAPx04
Entry ID 1712
Creation 2007-09-18 (Christophe Dunand)
Last sequence changes 2007-09-18 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2007-09-18 (Christophe Dunand)
Peroxidase information: PbAPx04
Name PbAPx04
Class Ascorbate peroxidase     [Orthogroup: APx002]*
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus balsamifera (trichocarpa x deltoides)    [TaxId: 3695 ]
Cellular localisation Stromal
Tissue type Roots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PbAPx04
start..stop		 S start..stop
PtAPx08 652 0 1..315 45..359
PtAPx07 601 0 1..315 63..374
PtremAPx03 600 0 6..309 1..303
MeAPx05 593 0 1..315 64..378
Literature and cross-references PbAPx04
Literature Ralph,S., et al., Genomics of hybrid poplar (Populus trichocarpax deltoides) interacting with forest tent caterpillars (Malacosoma disstria): normalized and full-length cDNA libraries, expressed sequence tags, and a cDNA microarray for the study of insect-induced defences. Mol. Ecol. 15 (5), 1275-1297 (2006).
EST ref. GenBank:   CN519458 [3' end]  CA823074 [Fragment]
Protein sequence: PbAPx04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   316
PWM (Da):   %s   34666.69 Transmb domain:   %s   o5-27i
PI (pH):   %s   8.06
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
KCLQFSPLAP HIFKDQKRSS MSTVAAASDP AQLKSAREDI KELLKSKSCH PILVRLGWHD SGTYNKNIEE WPRRGGANGS LRFDIELKHA ANAGLVNALK LIKPIKDKYS GVTYADLFQL  ASATAIEEAG GPKIPMKYGR VDVSAPEECP EEGRLPAAGP PKPADHLREV FYRMGLNDKE IVALSGAHTL GRSRPERSGW GKPETKYTKN GPGAPGGQSW TAEWLKFDNS YFKDIKQRKD 
DDLLVLPTDA ALFEDPSFKV YAEKYAEDQE AFFKDYAEAH AKLSNLGAKF DPQEGIVLDG VAGEKFMAAK YSSGKD 

Retrieve as FASTA  
Remarks Partial sequence from 6 ESTs. 5' is missing.