1. Browse the Database
  2. View Redoxidase
Entry information : SpPrx06
Entry ID 1769
Creation 2007-09-19 (Christophe Dunand)
Last sequence changes 2007-09-19 (Christophe Dunand)
Sequence status partial
Reviewer Qiang Li
Last annotation changes 2011-01-28 (Qiang Li)
Peroxidase information: SpPrx06
Name SpPrx06
Class Class III peroxidase     [Orthogroup: Prx011]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Sorghum
Organism Sorghum propinquum    [TaxId: 132711 ]
Cellular localisation N/D
Tissue type Meristems
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpPrx06
start..stop		 S start..stop
SbPrx24 282 7.11e-95 159..293 202..336
SbPrx24 223 7.26e-72 1..112 4..115
SiPrx85 273 3e-91 159..293 197..331
SiPrx85 160 3.62e-47 33..112 31..110
ZmPrx51 259 1.38e-85 159..293 204..339
ZmPrx51 172 6.88e-52 3..112 4..117
OsPrx97 241 1.08e-78 159..293 208..342
OsPrx97 147 3.41e-42 29..112 38..121
Literature and cross-references SpPrx06
Literature Cordonnier-Pratt,M.-M., Gingle,A., Sudman,M., Marsala,C. and Pratt ,L.H. An EST database from Sorghum: floral-induced meristems.
EST ref. GenBank:   BF422154 [5' end]  BG051573 [3' end]
Protein sequence: SpPrx06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   293 (265)
PWM (Da):   %s   26623.2 (24000.0) Transmb domain:   %s   i7-29o
PI (pH):   %s   6.5 (6.50) Peptide Signal:   %s   cut: 29 range:29-293
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASSSMAPCT MIMASVAAVL VALSSAAAAG LDMDFYSSTC PRVEAIVKEE MTEILKVSPT LAGPLLRLHF HDCFVRGCDG SVLLDSTPSS TAEKDATPNL TLRGFGSVQR VKxxxxxxxx  xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxGT AHCNLFSDRL YNFTGANNLA DVDPALDATY LARLRSRCRS LADNTTLNEM DPGSFLSFDA SYYRLVAKRR GLFHSDAALL 
TDPATRAYVQ RQATGLFAAE FFRDFADSMV KMSTIDVLTG AQGEIRNKCY LVN 

Retrieve as FASTA  
Remarks Partial sequence from 4 ESTs (BG051771 and BF422067). No overlap between 5' and 3' end but compiled based on homologies with other sequences. Floral-Induced Meristem 1 (FM1).