Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
334 (305) |
PWM (Da): |
36048.09 (33055.4) |
Transmb domain: |
i7-29o (i7-29o) |
PI (pH): |
6.38 (5.93) |
Peptide Signal: |
cut: 30 range:30-334 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MARSSTLSSP TVVALFAAAL LFLLHPLNAE LTADFYAKTC PDVSSIVQTV IHEALQYDPR ITASLLRLHF HDCFVQGCDG SVLLDNSPTI KSEKDAAPNF NSARGFGVVD KIKAAIESTC
PETVSCADIL ALAANASVYL SGGPYWTVLL GRRDSLTANQ GLANTSIPSP FESYANLTSK FYVLGLDITD LVTLSGAHTF GRAHCKSFTP RLYNFTKNGG PDPTLSPWYL TALQKLCPPN
FNPKVITDLD PTTPNLFDNH YYSNLQKNDG LFETDQELYS TAGAATVPIV NSFSADQSAF FKSFTRSIVN MGNISPLTGS NGEIRCNCRK VNKS
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Retrieve as FASTA
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Remarks |
Paternal (g21792.t1): incorrect prediction (extra intron in exon 1) |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AAGTGTTTTC TGGGGGGTTT TGGCCGAGTG CGTGTACGTG AATAAATAGC AGCGTGTGTA ATAAAATTCA GACATTCTTG GAAATGTCAA TTCTATTGGG CAGAGAGCCG GAGGTCTATA
TTTCTACGTC GAGTGTGTTC TGTTAAGTGT TGATCTGGGC AGAAGTACAG CGCAAGTGCC ATAACTTGGC ACGCCGGGAC ACTTAAGTGC CATAACTTCC AAACGGTACA CTTAAGTGCC
ACTTTTTTTT TCGAGTGGGA CACTTAAGTG CCACCTCCGG CGACCGTTGC CGGAAATCCT ACGTGGCAAT TTTTTATTAT TATTTTTTGC CTACGTGGCT CGCCGGAGCT CCAAATCAGC
ATAAAAATTA AAAAAATTAA AAAAAAAAGA AAATTAAAAA AAAAAAGAAA AAAGAAAATT TTAAAAATTT TAATTTTACA AAATTTTAAA ATTTTTTAAA AAATAAGAAA ATTTAAAAAA
AAATTAAAAA AAAAAAAGAA AGGGGGTGGG GGAGGTTGAA CGGGCGGCTG AGGGCTGAGC CCTCGCCGCC GCCGCCGCCC CGCCGTCGCC GGTCCTTCCC GGCAGCGGCG GGGAGGCGGC
GAGGGCCCGC GAGCCCTCGC CGGATCTGGG CGAGGGTCGC AGTAGGGCGC GGGCCGCGAC CCTCGCCCAG ATCCGGTGAG GGCTCGCGGG CCCTCGCCGC CTCCTCTCCG CCGCCGGGAA
GGGCCGGCGA CGGAGTGGGG AGGGTCGGCC GGGGTCGCCG GGCCCTGGCC AGGGGTCGCC GGGCCCTGGC CAGGGGCCGG CGAGGCCGGC CGACCGGCGG CGAGGGCCCG CGAGCCCTCG
CCCAGATCTG GGGCGAGGGT CGCGGCCCTC GCTGCGATCC GGCGAGGGCT GCGAGCCCTC GCCGTCGGTC GGCCGGGGGC TGGCGACCCC GGCTGACCCT CCCCCCTCCG TCGCCGGCCC
ATCCCGGCGA CGGCGGGGAG GCGGCGGCGG CGAGGGCTTA GCCCTCAGCC GCCCGTTCGA CCTCCCCCCC CCTTTTTTTT TTTAATTTTC TTAATTTTTT AAAACTTTTA AATTTTTCTT
AATTTTTAAA TTTTTCTTAA TTTTTTAAAT TTTTTAAATT TTTCTTAATT TTTAAATTTT TTGAATACTT TATAATTTAA TTAATTTTTA TATTATTATT TACACGTAGA CACGAAACGG
CGTCGTTTTT GCGTTTTCTC CGCCACGTCA GCGTGCAAAA CGACGCCGTT TTGGACTAAA CTCGCCGGAA AATTGCCACG TCAGCCATTT GGCCGGATTT TCGCCGGAGT GGCACTTAAG
TGTCCCATTT TGCTCCGATG ATGGCACTTA AGTGTACCAT TTTAAAGTTA TGGCACTTAA GTGTCCCGGC GTGCCAAGTT ATGGCACTCC AGGTGTCCTC ACCTCTGTTG ATCTGACTGA
AGTATTATGG AAGATTGTGC ATCTCTGTTA AGAGATCACA AAAAATAAAT GAGAACTTTC TTATATTGAT CATCCCTGAA GAGTTTATTA GAAATTCTAT AAACGTCGGC TAACACGAAT
CATGTAGTAT TTTAGTTTGA AAAAACATGT GGTTATATAA TAAATAAAGG ACATTAGATA ATGCTCGATA GCTTGAATAC ATTTTCGCTA ATCAATTTAT ATTGGACTTG AGCACATCTT
GGTATGGTAA TAAATTGGTG TTCGAAGGTC AGTGTAGGCT AGTATTTTTA GAATGATTTG CAATGATATT CTTCAAAGGC TATCTGAAGA AGGAGAATGG GCAAAAAGCA TGTCCTCTTC
CGTATTGATC AGTTCCAAGA TGGTGGCTGA TTAGATTAAG GTAATTTTGA TTCAAAATTG AGGTGTCTCA AATTCTATTT TAGGACATCA TCCATTTTTA TGCACAGTTA TAAGGTTTCT
TGATATAAGG TTTGTATAAG ATGCATTGAA ACTTTGCAAT TCTTCACCTC GAGTTTTTTT TTTTTTTTTT AGATAAAAAG
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Retrieve as FASTA
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DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCCGTT CTTCTACTCT TTCGTCGCCA ACGGTGGTGG CCCTTTTTGC CGCCGCCTTG TTGTTTCTCC TCCATCCATT GAATGCTGAA CTAACCGCTG ATTTTTATGC AAAGACATGC
CCGGACGTGT CCAGCATCGT CCAGACCGTG ATTCATGAGG CCCTTCAATA TGACCCACGC ATCACCGCCA GCCTCCTCCG TCTCCATTTC CACGATTGCT TCGTCCAAGT GAGTCCCTAC
ACTAGATCAA TTCCCATTGA CAATGAGTTC CAACTTGCCG CATTCTTTTT ACAGTACTTT CGATCAGATT ATCGAGTCAT TAGTCACGTA ACCTAATGCT TGAGCATGAC GTGTTTAAAG
GGGTGTGATG GATCGGTATT GCTGGACAAT AGCCCAACCA TAAAGAGCGA GAAAGATGCT GCTCCGAATT TTAATTCCGC AAGAGGGTTC GGTGTGGTGG ACAAGATCAA AGCGGCTATT
GAGAGCACTT GTCCTGAGAC TGTGTCTTGC GCTGACATCC TCGCCTTGGC TGCTAACGCT TCCGTTTATT TGGTATATGT CGTTTTAGTC AAAGAAACAT AAAACATATT TAAAGTATAC
TTAGGATTCA TTATTGTCAC TTGGCCTACA CGAATTATAA TTGTGTTTCT CTTGATTATC ACATTTATGA AATTGCAGTC AGGAGGTCCA TATTGGACGG TGCTCTTGGG GAGGAGGGAC
AGCTTGACGG CGAACCAAGG ACTAGCGAAC ACATCGATAC CCTCCCCTTT TGAGAGCTAT GCCAACCTCA CTTCCAAGTT CTATGTTTTG GGCTTGGACA TCACCGACCT TGTCACACTT
TCCGGTAAAA TAGAACAGTT GGACTTGCAT TTTGATACGA ACATGCAACT ACAGATATTG ATGCACAAAA TAGATTAACA GAGTGAAATG TCGGATTTTT TTCACATAAG TTATCGGCAC
AAACATCGCA TCACTTTCAT TTAGCACATT TCAACTTCCT AATATGATCA AGGTCTCTTC TTCATTGAGA TCAACTGACA GGCATGGGCT GTGCATGTGC ATGGGCCGTG CCCCGGCAAT
GCTATCTACT AGAAGGAATT TTAGTCAAGG ATTAAGGGTT AATTTTTTTT ATATCTAAAA TTGAATTTAA GTAAAGAATC GTCCTAAAAC ATGTGATCGA CTAAAGTGCA TGTGTTGTGC
CTAGGCTGTA CCTGGGTCGT GCATGGGCTA TGCACATTTA CTAGAAGGAA TTTTGACTAA GGATTAATGA TTTCTTTTTT ACCAAAAATT GAAAAAGTAA AGGATTGCCC TTCACTTGAG
ATCAACTGAC GTGCATGCGT TGTGCCTGGG CCATGCCATG TTGTGCATGG GTATATAGAT ATATTAGAAG GAATTTTAGC TAAAGGATTA AGGGTTTCTT TTCAATCTAA AATTGAATAA
GTAAAGGATT GCCCCGACTT AATTTCAGGA GTAGTTGTGT ATCATCACTA CTCTAAACAA GATAGATTAT TTAAAAACAA TTTTTTGCAT GACCGAGACT TATCTCCTCG GTAAATTCAA
AAAGGAGAGG AAGCCGATGA TATGCAATTT CATTAAATTA GAAATTATGG GTTCATACAT TTGCAGGTCC ATAATTTGCT AGTCCTTGAT AAAAATGGTA ATTCAATAGG GTTAGTTTGA
TTGAACTGAA TGAGTATAGT TAAAATCTCC TTGTGTGGAT CCCACTTATC TTTAATTCAA ATGGATCTAA ATCAAGCCCG TATCAGCAAC TCTTTAAGTC TTATCTAGTA TAACTTCTGC
TATCAAGACG AAGAAGTGGT CAATGATGAC ACTTCATCGT TCAATTCATG ACAAGGTTCA TAGCGCTGAA ACCATCGAAT TAATGTAATT TTTTTTTTGT TGTGGTTTGT TTTCAATTAA
ACTAGTGTAC TTTTATGTGT AATTTTTTTT ATTACAAATT TGAAAAATAT ATTCGTGTTT TATTCATTTT TTCAATGGGT AATTTTATAT TTCTGATATC ATTACAAGAG TATAAATATC
AGGGGAGAAT GCTATCAAAA TTTGCAAGCT CCTCATATAC TTGTATGAGA AATGCCAAGT ATATTGATAG AATCAATAAA TTAAGTGATG TCACATATCA TTATTATTTA TTTATATTTT
TACTAACGAG TTTGTTGCAT ATGTTTAGTA TACAAATTCT ATTAAGCATT CCTAGTATTG GTCTATTTAT CCACCTTCAC AATTGAGCAT CTGCAGATAT TTTGTTCTCT TAGCTAATTA
TTCGTGAATA TGATAATAAA ACAGGAGCTC ACACCTTTGG ACGTGCACAT TGCAAGTCAT TCACCCCTAG GCTGTACAAC TTCACCAAAA ATGGCGGCCC CGATCCCACC CTAAGCCCGT
GGTACTTGAC GGCTCTCCAG AAACTTTGCC CTCCAAACTT CAATCCTAAA GTCATCACCG ACCTCGATCC GACGACCCCG AACTTGTTTG ACAACCACTA CTACTCCAAC CTCCAGAAAA
ATGACGGGCT TTTTGAGACT GATCAAGAGC TGTACTCGAC AGCCGGTGCT GCGACAGTAC CCATCGTCAA CAGCTTCAGT GCCGACCAGA GTGCCTTCTT CAAGAGCTTC ACTCGGTCGA
TAGTAAACAT GGGAAACATC AGTCCTCTCA CCGGAAGTAA CGGGGAGATC AGGTGCAATT GCAGGAAGGT CAATAAGAGT TGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGGCCCGTT CTTCTACTCT TTCGTCGCCA ACGGTGGTGG CCCTTTTTGC CGCCGCCTTG TTGTTTCTCC TCCATCCATT GAATGCTGAA CTAACCGCTG ATTTTTATGC AAAGACATGC
CCGGACGTGT CCAGCATCGT CCAGACCGTG ATTCATGAGG CCCTTCAATA TGACCCACGC ATCACCGCCA GCCTCCTCCG TCTCCATTTC CACGATTGCT TCGTCCAAGG GTGTGATGGA
TCGGTATTGC TGGACAATAG CCCAACCATA AAGAGCGAGA AAGATGCTGC TCCGAATTTT AATTCCGCAA GAGGGTTCGG TGTGGTGGAC AAGATCAAAG CGGCTATTGA GAGCACTTGT
CCTGAGACTG TGTCTTGCGC TGACATCCTC GCCTTGGCTG CTAACGCTTC CGTTTATTTG TCAGGAGGTC CATATTGGAC GGTGCTCTTG GGGAGGAGGG ACAGCTTGAC GGCGAACCAA
GGACTAGCGA ACACATCGAT ACCCTCCCCT TTTGAGAGCT ATGCCAACCT CACTTCCAAG TTCTATGTTT TGGGCTTGGA CATCACCGAC CTTGTCACAC TTTCCGGAGC TCACACCTTT
GGACGTGCAC ATTGCAAGTC ATTCACCCCT AGGCTGTACA ACTTCACCAA AAATGGCGGC CCCGATCCCA CCCTAAGCCC GTGGTACTTG ACGGCTCTCC AGAAACTTTG CCCTCCAAAC
TTCAATCCTA AAGTCATCAC CGACCTCGAT CCGACGACCC CGAACTTGTT TGACAACCAC TACTACTCCA ACCTCCAGAA AAATGACGGG CTTTTTGAGA CTGATCAAGA GCTGTACTCG
ACAGCCGGTG CTGCGACAGT ACCCATCGTC AACAGCTTCA GTGCCGACCA GAGTGCCTTC TTCAAGAGCT TCACTCGGTC GATAGTAAAC ATGGGAAACA TCAGTCCTCT CACCGGAAGT
AACGGGGAGA TCAGGTGCAA TTGCAGGAAG GTCAATAAGA GTTGA
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Retrieve as FASTA
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