View Redoxidase 8097

Entry information : EgrPrx53 (Eucgr.A02459 / Egrandis_v1_0.018850m)

Entry ID	8097
Creation	2011-02-04 (Christophe Dunand)
Last sequence changes	2011-02-07 (Qiang Li)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2013-10-30 (Qiang Li)

Peroxidase information: EgrPrx53 (Eucgr.A02459 / Egrandis_v1_0.018850m)

Name (synonym)

EgrPrx53 (Eucgr.A02459 / Egrandis_v1_0.018850m)

Class

Class III peroxidase [Orthogroup: Prx071]

Taxonomy

Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus

Organism

Eucalyptus grandis [TaxId: 71139 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	EgrPrx53 start..stop	S start..stop
EguPrx54	686	0	1..334	1..334
EguPrx53	686	0	1..334	1..334
EglPrx53	686	0	1..334	1..334
EgrPrx54	677	0	1..335	1..335

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '8097' 'join(35254045..35254272,35254405..35254596,35254723..35254888,35256345..35256763)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	35254045..35254272	226	N° 2	35254405..35254596	190	N° 3	35254723..35254888	164	N° 4	35256345..35256763	417
join(35254045..35254272,35254405..35254596,35254723..35254888,35256345..35256763 )

Literature and cross-references EgrPrx53 (Eucgr.A02459 / Egrandis_v1_0.018850m)

DNA ref.	Phytozome 12: scaffold_1 (35254045..35256763)

Protein sequence: EgrPrx53 (Eucgr.A02459 / Egrandis_v1_0.018850m)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	334 (305)
PWM (Da):	36135.12 (33055.4)	Transmb domain:	i7-29o
PI (pH):	6.61 (5.93)	Peptide Signal:	cut: 30 range:30-334

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MARSSTLSSPTVVALFAAALLFLLHPLNAELTADFYAKTCPDVSSIVQTVIHEALQYDPRITASLLRLHFHDCFVQGCDGSVLLDNSPTIKSEKDAAPNFNSARGFGVVDKIKAAIESTC
PETVSCADILALAANASVYLSGGPYWTVLLGRRDSLTANQGLANTSIPSPFESYANLTSKFYVLGLDITDLVTLSGAHTFGRAHCKSFTPRLYNFTKNGGPDPTLSPWYLTALQKLCPPN
FNPKVITDLDPTTPNLFDNHYYSNLQKNDGLFETDQELYSTAGAATVPIVNSFSADQSAFFKSFTRSIVNMGNISPLTGSNGEIRCNCRKVNKS*

Retrieve as FASTA

Remarks

Complete sequence from genomic (scaffold_1: 35254008 - 35256987, Egrandis_v1_0.018850m), It very similar to EgraPrx107 (scaffold_1:35,263,534..35,266,207, Egrandis_v1_0.018837m). Correct prediction from phytozome.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCCCGTTCTTCTACTCTTTCGTCACCAACGGTGGTGGCCCTTTTTGCCGCCGCCTTGTTGTTTCTCCTCCATCCATTGAATGCTGAACTAACCGCTGATTTTTATGCAAAGACATGC
CCGGACGTGTCCAGCATCGTCCAGACCGTGATTCATGAGGCCCTTCAATATGACCCACGCATCACCGCCAGCCTCCTCCGTCTCCATTTCCACGATTGCTTCGTCCAGAGGTGAGTCCCT
ACACTAGATCAATTCCCATTGACAATGAGTTCCAACTTACCGCATTCTTTTTACAGTACTTTCGATCTGATTATCGAGTTATTAGTCACGTAACCTAATGCTTGAGCATGACGTGTTTAA
AGGGGTGTGATGGATCGGTATTGCTGGACAATAGCCCAACCATAAAGAGCGAGAAAGATGCTGCTCCGAATTTTAATTCCGCAAGAGGGTTCGGTGTGGTGGACAAGATCAAAGCGGCTA
TTGAGAGCACTTGTCCTGAGACTGTGTCTTGCGCTGACATCCTCGCCTTGGCTGCTAACGCTTCCGTTTATTTGTGGTATGTGTCGTTTTAGTCAAAGAAACATAAAACATATTTAAAGT
ATACTTAGGATTCATTATTGTCACTTGGCCTACACGAATTATAATTGTGTTTCTCTTGATTATCACATTTATGAAATTGCAGTCAGGAGGTCCATATTGGACGGTGCTCTTGGGGAGGAG
GGACAGCTTGACGGCGAACCAAGGACTAGCGAACACATCGATACCCTCCCCTTTTGAGAGCTATGCCAACCTCACTTCCAAGTTCTATGTTTTGGGCTTGGACATCACCGACCTTGTCAC
ACTTTCCGCGGTAAAACAGAACAGTTGGACTTGCATTTTGATACGAACATGCAACTACAGATATTGATGCACAAAATAGATTAACAGAGTGAAATGTCGGATTTTTGTCACATAAGTTAT
CGGCACAAACATCGCATCACTTTCATTTAGCACATTTCAACTTCCTAATATGATCAAGGTCTCTTCTTCATTGAGATCAACTGACAGGCATGGGCTGTGCATGTGCATGGGCCGTGCCCC
GGCAATGCTATCTACTAGAAGGAATTTTAGTCAAGGATTAAGGGTTAAATTTTTTTTTTATCTAAAATTGAATTTAAGTAAAGAATCGTCCTAAAACATGTGATCGACTAAAGTGCATGT
GTTGTGCCTAGGCTGTACCTGGGTCGTGCATGGGCTATGCACATTTACTAGAAGGAATTTTGACTGAGGATTAATGATTTCTTTTTTACCAAAAATTGAAAAAGTAAAGGATTGCCCTTC
ACTTGAGATCAACTGACGTGCATGCGTTGTGCCTGGGCCATGCCATGTTGTGCATGGGTATATAGATATATTAGAAGGAAGTTTAGCTAAAGGATTAAGGGTTTCTTTTCAATCTAAAAT
TGAATAAGTAAAGGATTGCCCCGACTTAATTTCAGGAGTAGTTGTGTATCATCACTACTCTAAAAAAGATAGATTATTTAAAAACAATTTTTTGCATGACCGAGACTTATCTCCTCGGTA
AATTCAAAAAGGAGAGGAAGCCGATGATATGCAATTTCATTAAATTAGAAATTATGGGTTCATACATTTGCAGGTCCATAATTTGCTAGTCCTTGATAAAAATGGTAATTCAATAGGGTT
AGTTTGATTGAACTGAATGAGTATAGTTAAAATCTCCTTGCGTGGATCCCACTTATCTTTAATTCAAATGGATCTAAATCAAGCCCGTATCAGCAACTCTTTAAGTCTTATCTAGTATAA
CTTCTGCTATCAAGACGAAGAAGTGGTCAATGATGACACTTCATCGTTCAATTCATGATGAGGTTCATAGCGTTGAAACCATCGAATTAATGTAATATTTTCTTTGTTGTGATTTGTTTT
CAATCAAACTAGTGTACTTTTATGTGTAATTTTTTTATTACAAATTTGAAAAATATATTCGTGTTCAATGGGTAATTTTATATTCCTAATATCATTACAAGAGTATAAATATTGGAGGAG
GATGCTATCAAAATTTGCATGCCCCTCACATACTTGTATGAGAAATGCCAAGTATACTGAGGTCATTTGATAGAATCAATAAAATAAGTGATGTCACATATCACTATTATTTATTTATAT
TTTTACTAACGAGTGTGTTGCATATGTTTAGTATACAAATTCTATTAAGCATTCCTAGTATTGGTCTATTTATCCACCTTCACAATTGAGCTATGCAGATATTTTGTTCTCTTAGCTAAT
TATTCGTGCATATGATAATAAAACAGGAGCTCACACCTTTGGACGTGCACATTGCAAGTCATTCACCCCTAGGCTGTACAACTTCACCAAAAATGGTGGCCCCGATCCCACCCTAAGCCC
GTGGTACTTGACGGCTCTCCAGAAACTTTGCCCTCCAAACTTCAATCCTAAAGTCATCACCGACCTCGATCCGACGACCCCGAACTTGTTTGACAACCACTACTACTCCAACCTCCAGAA
AAATGACGGGCTTTTTGAGACTGATCAAGAGCTGTACTCGACAGCCGGTGCTGCGACAGTACCCATCGTCAACAGCTTCAGTGCCGACCAGAGTGCCTTCTTCAAGAGCTTCACTCGGTC
GATAGTAAACATGGGAAACATAAGTCCTCTCACCGGAAGTAACGGGGAGATCAGGTGCAATTGCAGGAAGGTCAATAAGAGTTGA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA