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Entry information : OsAPx02(APX2 / APXb / LOC_Os07g49400)
Entry ID 1866
Creation 2006-09-05 (Christophe Dunand)
Last sequence changes 2006-09-05 (Christophe Dunand)
Sequence status complete
Reviewer Catherine
Last annotation changes 2022-01-25 (Catherine )
Peroxidase information: OsAPx02(APX2 / APXb / LOC_Os07g49400)
Name OsAPx02(APX2 / APXb / LOC_Os07g49400)
Class Ascorbate peroxidase    [Orthogroup: APx2001]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation N/D
Tissue types Callus
Flowers
Leaves
Pannicles
Radicles
Roots
Seedlings
Spikes
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OsAPx02
start..stop		 S start..stop
OmAPx02 503 0 4..251 4..251
HvAPx03 472 8.49e-172 1..250 1..250
SbAPx02 472 9.17e-172 4..250 3..249
TaAPx04-1D 472 1.14e-171 1..250 1..250
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1866' 'complement(join(29530733..29530748,29530843..29530901,29531036..29531138,29531255..29531334,29531424..29531509,29531868..29531916,29532109..29532174,29532260..29532434,29532528..29532649))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 29532528..29532649 120 N° 2 29532260..29532434 173 N° 3 29532109..29532174 64 N° 4 29531868..29531916 47
N° 5 29531424..29531509 84 N° 6 29531255..29531334 78 N° 7 29531036..29531138 101 N° 8 29530843..29530901 57
N° 9 29530733..29530748 14  
complement(join(29530733..29530748,29530843..29530901,29531036..29531138,2953125 5..29531334,29531424..29531509,29531868..29531916,29532109..29532174,29532260..2 9532434,29532528..29532649))


exon

Literature and cross-references OsAPx02(APX2 / APXb / LOC_Os07g49400)
Literature Morita,S., Kaminaka,H., Masumura,T. and Tanaka,K. (2000) The expression of two cytosolic ascorbate peroxidase genes in rice. NCBI Direct Submission.
Protein ref. UniProtKB:   Q9FE01
DNA ref. GenBank:   NC_008400.1 (29532649..29530736)
Protein sequence: OsAPx02(APX2 / APXb / LOC_Os07g49400)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   251 (297)
PWM (Da):   %s   26971.55 (31928.7)  
PI (pH):   %s   5.35 (6.74) Peptide Signal:   %s   cut: 26 range:26-322
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MGSKSYPTVSDEYLAAVGKAKRKLRGLIAEKNCAPLMLRLAWHSAGTFDVSSRTGGPFGTMKNPGEQSHAANAGLDIAVRLLDPIKDQLPILSYADFYLAGVVAVEVTGGPEVPFHPGRQDKPEPPPEGRLPDATQGSDHLRQVFSAQMGLSDKDIVALS
GGHTGRCHKERSGFEGAWTSNPLIFDNSYFTELVSGEKEGLLQLPSDKALMADPAFRPLVEKYADEDAFFADYAEAHLKLSELGFAEE

Retrieve as FASTA  
Remarks Complete sequence from 87 ESTs and 1 genomic (Chromo 7, 8 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGCAGCAAGTCGTACCCGACGGTGAGCGATGAGTACCTGGCGGCCGTGGGCAAGGCGAAGCGCAAGCTCCGCGGCCTCATCGCCGAGAAGAACTGCGCCCCACTCATGCTCCGCCTC
GCGTAACTTTCTTCTTCTTCTTCTTCTACTGATTAATTTCCAGAAGATAGAGTAGGAGGAGTAGATGTTGAATTGCAGTGGCTGGCTGGCTGCAGGTGTGGCACTCTGCTGGCACCTTCG
ATGTGTCGTCGAGGACCGGCGGGCCCTTCGGCACCATGAAGAACCCCGGCGAGCAGTCCCACGCCGCCAACGCCGGCCTCGACATCGCCGTCAGGCTTCTCGACCCCATCAAGGACCAAC
TTCCCATCCTCTCCTACGCCGACTTCTACCAGGTAAGGTTCACTTCCCTCCCTTCCTCCCTTCCTTCCTCTCAACTCATCAACCTCTTAATTGGAGTCTCTCCCTCTCTATTGGCAGCTC
TTGCTGGCGTTGTGGCCGTCGAGGTCACCGGCGGACCTGAGGTCCCCTTCCATCCGGGCAGGCAGGTCAGAATCACATTTCCCATCCCTAAACCCTCTCCCTCTCTCTCCCCCCTTCTTC
TTTCTTCTTCTGGTAGATGCAAATGGTATTTTTCTTAAGTCAATTCTTTTCTTTCGTCATCTTGTACGCCGCTGTTTCCTTTCCCTGAATTCTCCACTGTCTTGTGAATGTTGATGATGT
GATGTGTTTGTTTCTAGGAGACAAGCCTGAGCCTCCTCCTGAAGGCCGTCTTCCTGATGCCACACAAGGTATTAAGATTTCCTCTGTATTAAGTTACCCCTATGACAATGCATTTCCCAA
TGTGTTGGTGATTAAATTTTCTAGATCTATGACCAGCATTTGTATGTGCTACTGATGGAGTAGTTCATATTGCAAGTCCATTACCAGAATTCTTTCATGCTTAAGTAAGTTGTGTAACCT
ACATAAGACTAAAATTTTCCAACCCTGTTTATGCAAACCACATTACTAAAGTTTGTTTTGTGTTCCTGTTTATTCTTCTTTCTTATATGGAGCATACATGTTACCTGTGTGTTCTTTAAT
TAACAGTGTGCCAATTTGTGGATGCGAGATAACTAATATGTCATGGTCTTCTGGCTGTTGGTCCAGGTGTTCTGACCACCTAAGGCAGGTCTTTTCTGCGCAGATGGGTTTGAGTGACAA
GGACATAGTTGCTCTTTCTGGTGGTCACACCCTGGTTGGTACACTTGTGCAATTGCCCTAGTGTGTTTCTCATATCTTGTAACCGGAAGGGTTATTCATGCAGCTTCACTTCATCTTCTG
TAGGGGGAAGATGCCACAAGGAGAGATCTGGCTTTGAGGGAGCCTGGACGTCCAACCCTTTGATCTTTGACAACTCTTACTTCACGTGCGTGATCTCTGATTCTTTTTAAAGATGCATCC
TGTCTGTTGATAAACAGCCAGCCACAGCTTGTTTCCTTGTATGCTAAAGAATGAAAACCAAAATCTCCTCTCGATCAACAGCGCGAGCTTGTGAGTGGCGAGAAGGAAGGCCTTCTTCAG
CTGCCAAGTGACAAAGCCCTCATGGCTGACCCAGCCTTCCGTCCACTGGTGGAGAAATATGCTGCGGTACACCCCTTGATCCTTGCATTATTTTCTCTCGTCTTCTTTCTAAAGAGTTGT
TTTTTTTAAAATAAAAGAAATAAGAGAAATGGATCATCGTTGATCTCTTAAAAAGTAGATGATTGTTGCCTGATATGTAGGAGATGAGGACGCCTTCTTTGCGGATTACGCCGAGGCCCA
CCTCAAGCTCTCTGAACTGGGGTAAGGGATGCAACTGGTGTGCTTGTCTGTGATGCGTTATTGGAGTGCTTTGTGCCAGAGTTTCACTAATTATTGTTGTGTTTGTGGGTTTCAGATATT
TGCTGAGGAATAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGGCAGCAAGTCGTACCCGACGGTGAGCGATGAGTACCTGGCGGCCGTGGGCAAGGCGAAGCGCAAGCTCCGCGGCCTCATCGCCGAGAAGAACTGCGCCCCACTCATGCTCCGCCTC
GCGTGGCACTCTGCTGGCACCTTCGATGTGTCGTCGAGGACCGGCGGGCCCTTCGGCACCATGAAGAACCCCGGCGAGCAGTCCCACGCCGCCAACGCCGGCCTCGACATCGCCGTCAGG
CTTCTCGACCCCATCAAGGACCAACTTCCCATCCTCTCCTACGCCGACTTCTACCAGCTTGCTGGCGTTGTGGCCGTCGAGGTCACCGGCGGACCTGAGGTCCCCTTCCATCCGGGCAGG
CAGGACAAGCCTGAGCCTCCTCCTGAAGGCCGTCTTCCTGATGCCACACAAGGTTCTGACCACCTAAGGCAGGTCTTTTCTGCGCAGATGGGTTTGAGTGACAAGGACATAGTTGCTCTT
TCTGGTGGTCACACCCTGGGAAGATGCCACAAGGAGAGATCTGGCTTTGAGGGAGCCTGGACGTCCAACCCTTTGATCTTTGACAACTCTTACTTCACCGAGCTTGTGAGTGGCGAGAAG
GAAGGCCTTCTTCAGCTGCCAAGTGACAAAGCCCTCATGGCTGACCCAGCCTTCCGTCCACTGGTGGAGAAATATGCTGCGGATGAGGACGCCTTCTTTGCGGATTACGCCGAGGCCCAC
CTCAAGCTCTCTGAACTGGGATTTGCTGAGGAATAA

Retrieve as FASTA