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Entry information : HvAPx03
Entry ID 2149
Creation 2006-02-09 (Christophe Dunand)
Last sequence changes 2015-08-05 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2016-02-10 (Achraf Jemmat)
Peroxidase information: HvAPx03
Name HvAPx03
Class Ascorbate peroxidase    [Orthogroup: APx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Poaceae Hordeum
Organism Hordeum vulgare (barley)    [TaxId: 4513 ]
Cellular localisation Cytosolic
Tissue types Apex
Callus
Embryos
Embryosac
Endosperm
Flower buds
Flowers
Leaves
Pericarps
Pistils
Roots
Seedlings
Seeds
Shoots
Spikes
Inducers Blumeria infection (Powdery mildew attack)
Cold stress
Fusarium infection
Repressor N/D
Best BLASTp hits
Perox score E-value HvAPx03
start..stop		 S start..stop
TaAPx04-1D 520 0 1..256 1..256
TaAPx04-1A 519 0 1..256 153..408
TaAPx04-1B 515 0 1..256 1..254
BdiAPx01 503 0 1..256 1..256
Literature and cross-references HvAPx03
Literature Dunford,R.P. and Laurie,D.A. Genes controlling flowering time in barley. Unpublished
Protein ref. GenBank:   AAL08496.1 UniProtKB:   Q945R5
DNA ref. GenBank:   AF411228.1
Protein sequence: HvAPx03
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   256
PWM (Da):   %s   27518.81  
PI (pH):   %s   4.89
Sequence
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Send to Peroxiscan
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MAAKCYPTVS DEYLAAVAKA RRKLRGLIAE KNCAPLMLRL AWHSAGTFDV ATKTGGPFGT MKCPAELAHG ANAGLDIAVR LLEPIKEQFP ILSYADFYQL AGVVAVEVTG GPEVPFHPGR  QDKPEPPPEG RLPDATQGSD HLRQVFSTQM GLSDQDIVAL SGGHTLGRCH KERSGFEGAW TANPLIFDNS YFTELLSGEK EGLLQLPTDK VLLTDPAFRP LVDKYAADED AFFADYAEAH 
LKLSELGFGE ASEGCC 

Retrieve as FASTA  
Remarks Complete sequence from 168 ESTs. TIGR accession numbers: TC146831, AW983086, TC132386, and AL505458. Sputink accession numbers: C_AJ434660, C_BF264323, S_BI956394, S_AL505458, S_BI950955, S_BF627531, and S_BI958597. NCBI unigene: Hv.920 (1 cDNA and 222 ESTs).
CDS►
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ATGGCCGCCA AGTGCTACCC AACGGTCAGC GACGAGTACC TGGCCGCCGT CGCCAAGGCC AGGCGCAAGC TCCGTGGCCT CATCGCCGAG AAGAACTGCG CGCCCCTCAT GCTCCGCCTC  GCGTGGCACT CGGCCGGGAC CTTCGACGTG GCCACCAAGA CCGGCGGGCC CTTCGGCACC ATGAAGTGCC CCGCGGAGCT CGCCCACGGC GCCAACGCCG GCCTCGACAT CGCCGTCAGG  CTGCTCGAGC CCATCAAGGA GCAGTTCCCC ATCCTCTCCT ACGCCGACTT CTACCAGCTC GCTGGAGTCG TCGCCGTCGA GGTGACCGGC GGGCCTGAGG TTCCCTTCCA CCCCGGGAGA  CAGGACAAGC CCGAGCCTCC TCCAGAAGGC CGTCTTCCTG ATGCCACCCA AGGCTCTGAC CACCTCAGGC AGGTGTTTTC CACTCAGATG GGTTTGAGTG ACCAGGACAT TGTTGCTCTT  TCTGGTGGTC ACACCCTGGG AAGATGCCAC AAGGAGAGAT CTGGGTTTGA GGGAGCCTGG ACCGCCAACC CTTTGATCTT CGACAACTCT TACTTCACTG AGCTCCTGAG TGGGGAGAAG  GAAGGTCTTC TTCAGTTGCC GACCGACAAG GTCCTGCTGA CTGACCCGGC CTTCCGCCCA CTTGTGGACA AATATGCTGC GGATGAGGAT GCGTTCTTTG CTGACTACGC CGAGGCACAC 
CTCAAGCTCT CTGAACTTGG ATTCGGCGAG GCGTCTGAGG GCTGCTGCTG A 

Retrieve as FASTA  
cDNA►
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GGCACGAGGT CCGTCCCCAC ACACACGCAC GCGTTTGACA TTTCCTCCCC ACCGCCGCCG GCGCCGCTGC TCCAGCCATG GCCGCCAAGT GCTACCCAAC GGTCAGCGAC GAGTACCTGG  CCGCCGTCGC CAAGGCCAGG CGCAAGCTCC GTGGCCTCAT CGCCGAGAAG AACTGCGCGC CCCTCATGCT CCGCCTCGCG TGGCACTCGG CCGGGACCTT CGACGTGGCC ACCAAGACCG  GCGGGCCCTT CGGCACCATG AAGTGCCCCG CGGAGCTCGC CCACGGCGCC AACGCCGGCC TCGACATCGC CGTCAGGCTG CTCGAGCCCA TCAAGGAGCA GTTCCCCATC CTCTCCTACG  CCGACTTCTA CCAGCTCGCT GGAGTCGTCG CCGTCGAGGT GACCGGCGGG CCTGAGGTTC CCTTCCACCC CGGGAGACAG GACAAGCCCG AGCCTCCTCC AGAAGGCCGT CTTCCTGATG  CCACCCAAGG CTCTGACCAC CTCAGGCAGG TGTTTTCCAC TCAGATGGGT TTGAGTGACC AGGACATTGT TGCTCTTTCT GGTGGTCACA CCCTGGGAAG ATGCCACAAG GAGAGATCTG  GGTTTGAGGG AGCCTGGACC GCCAACCCTT TGATCTTCGA CAACTCTTAC TTCACTGAGC TCCTGAGTGG GGAGAAGGAA GGTCTTCTTC AGTTGCCGAC CGACAAGGTC CTGCTGACTG  ACCCGGCCTT CCGCCCACTT GTGGACAAAT ATGCTGCGGA TGAGGATGCG TTCTTTGCTG ACTACGCCGA GGCACACCTC AAGCTCTCTG AACTTGGATT CGGCGAGGCG TCTGAGGGCT  GCTGCTGATT CAAGATCGGC GCCTGAGGGT CGGTAATGAA GAAGAAGATC ATGAAGAAGA AGAAGATCAT GAAGAAGAAG AGCAATAAGA ATCTGTCGTC GGCCCAGTGG CCATGTCATG  TGTTTGTCTG GATTTGGATT AGATCGGTCG GTCGATGGGG TGTTGCATTG TTTTGCTTTT GACGCCTCGT ATCTTGTGAT GGACCTGCTT GTAGTGTGAA CCGCTAAGTG TTATGTAGTT 
CCTTTCCGGT TGTTTTTCCC TGTCGAGAAC GAAATGAAAT TTTTTTTGGT TCCCCCCA 

Retrieve as FASTA