Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
256 |
PWM (Da): |
27612.88 |
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PI (pH): |
5.15 |
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Sequence
Send to BLAST
Send to Peroxiscan
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
MAAKCYPTVTDEYQTAVAKAKRKLRGLIAEKNCAPLMLRLAWHSAGTFDVATKTGGPFGTIKCPAELAHGANAGLDIAVRLLEPIKDQFPILSYADFYLAGVVAVEVTGGPEVPFHPGRQDKPEPPPEGRLPDATQGSDHLRQVFSTQMGLSDQDIVALSGGHTGRCHKERSGFEGAWTANPLIFDNSYFKELLSGEKEGLLQLPTDKTLLSDPAFRPLVDKYADEDAFFADYAEAHLKL SELGFGGYFEGCC |
Retrieve as FASTA
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Remarks |
Complete sequence from genomic (chromo 1, 8 introns), 10 ESTs. Cultivar="Bd21-0".
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DNA ►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCCGCCAAGTGCTACCCAACAGTCACCGATGAGTACCAGACGGCCGTCGCCAAGGCCAAGCGCAAGCTCCGCGGCCTCATCGCCGAGAAGAACTGCGCCCCTCTCATGCTGCGCCTC GCGCGTGCGTATATCTTCTCTCTTCTCTTCCGACCTCGCTAGACTAGAGTTGCTAGATCTGACCATTCTCTCTCTGCAGGTGGCACTCGGCGGGGACCTTCGACGTCGCCACCAAGACCG GCGGCCCCTTCGGAACCATCAAGTGCCCCGCGGAGCTCGCGCACGGCGCCAACGCGGGCCTCGACATCGCCGTCAGGCTACTCGAGCCCATCAAGGACCAATTCCCCATCCTCTCCTACG CCGACTTCTACCAGAGGTCAGCGATCCCATCCTCTCCTACGCCGAGATCTGGAATTTGTTCTACTTTTCTTAAATTTATTTTTTGCCTTTTATGCTCTGTGGCAGCTCGCTGGAGTCGTG GCCGTCGAGGTGACCGGCGGACCTGAGGTTCCATTCCACCCGGGCAGACAGAGGTGACCATACTTTTCAATTTCCCTGCCCAACTGCGATTTCTCTACAGGGCCCGCTGTTTCGTTACTT TTACCTGCCGCGACCTAAGATAGTAGTGCCAACCATTTCTCTATCGTGTATCATCATCATCATCATCATCATCATCATTATCTTTATCTTTAGAAACCATTTGGCATTGGTAGTTGGCCC AGAAGAAATTATTTTAGGATGTTCTGATGGATAGATGCAAGACAATTAGTATGTTGTGATGGATTGGTGCAAGATGATTGTTGTCGCATCTGTCGATGTGCGATTATTTGTTATTTTATA CATGATGCCAAGTTTGTTGCCATCTTCTGTCTATTTTCTTGTTTCTCAGGATCAGATTTATCTTCTTTTGTTCCATTCCACATTTGACTCTGATCTCTTAAGCTATAACTATCACAATAA ATAAGATGGTATCTCATAAAGTTTCTGGTACACATGTGTTAGGTGTGGTAATGAGAGTTTAGAGGTGTTGTTGTTCTCTTCAAGTAAATCTGATTATTATGTCCTACTGGGGGTATAAAT CATGTATGGCATGCATATCCTAACAACTACATTACATAGGAATATACCTTCTTATTGATGTCTTATGGTTTAGGTAAACAGCGTCAGTTTAGGGCTGGAAGTTCGCTTTCCCTTCACATT ATATCTTGCGTTTGTTGATCTATCTTCTGTGCACATTGTTTCTTATGCAACATTGTATTCATTTCTTTAGTTGCTCTGCACCCAAGTGTCACGCGATAATTGTGCTCCAACTTGCCAATT GATCCCTATTTCTTCTTCTGTATAGATGTGAGAACATTGTTTATCTCTTCATATCCTTTGGTTAAACTATATATTTCTGTAGGTCACTCTTCTTTCTAGTAAGTAGCTACTGGTTGGGCA TAATAATCAATATGATAGCTACGTGAAGGAACATGTACTGTTGTGTGTGATTGTGATTGAGTTAGAATCTGCATGTCTTCGTATTCTCATGATCCTTTCTAAAATATATTTTCATGCAAA ATGACTCAGTAGCACCAGTTTTCTTTCCCTGTGTGGGTGTATCCATGCAGTGTTAGTCATGGAGTTTTACGATGTGTTGTCTTTGTTTGTAGGACAAGCCTGAGCCTCCTCCAGAAGGCC GCCTTCCTGATGCCACCCAAGAGGTACAACCGTGAAAACATGTCTTATTGCTTTGTTAATTTTGGTACTGTACCATTTATGCAAGGGTGGAATGCTTTTAAGAATGTTATAAAATATCAT CGTTTAGCATTTCGCAGTGTTACGCAGTGGTGACATTTCTACGTTATGGTGGGCATAGTTTATTACAGAACACTCTCTACTTTCTTGAGGCTAATTATTTCATTTCTTTATATTGCAAAT CCAATACCAAAATGTTTGGCCGCTTCTGGGAGCTTTGTGTAACCTCCAAAATTCTAAAATTTTCCGAGCAGTATCTCTGAATATATGGCTAGGCTGACATGTTGATATTACTATTGTGTC AGGCTCTGACCACCTCAGGCAGGTATTTTCCACTCAGATGGGTTTGAGCGACCAGGACATTGTTGCGCTTTCTGGTGGTCACACCCTGTGGTTGGTCCAATTGTGCAATTAGCATATTTG TGTCATGCTTGTTTGTAGGCTTGAAGAGTCCTGCTTATGCAGCTTCAATTATCATGTGCAGGGAAGGTGCCACAAGGAAAGATCTGGCTTTGAGGGAGCGTGGACTGCCAACCCTTTGAT CTTTGACAACTCGTACTTCAAAAGTAAGAGTGATATCTGCTTTTTGAAAGCATGCGGCCTGTTTATTTGTATAAGAGTCCAAGCTGCCTCCGTGTTTTTTCCTGTTCATGATGTTCTTTT TTCCTCAACCGAAAGTTTATATATCTTGACAGGGAGCTCCTGAGTGGCGAGAAGGAAGGCCTTCTTCAGTTGCCGACTGACAAAACCCTCCTGTCCGACCCGGCCTTCCGCCCACTCGTG GATAAATATGCTGCGCGGTACACCCTTGATCCTGGTTTCTTGTGTAGTTCTAGTTCACTGTTGGGTGGCTACCCCACCAATCCAGTACTGTATAAGCTTATCTGAGACATTTGATGCTGG TTAATGTTGCAGGATGAGGATGCTTTCTTTGCTGACTATGCTGAGGCACACCTGAAGCTCTCTGAGTTGGGGGGTAAGTAACACGATCATCGTTCTCGTTGATGCATCATTGAAATGACT TGCTAGCGCAACATTGTCAGAAAGTAGACCCCCTTGTTGATTGTTTCCAGATTTGGCGGGTACTTCGAAGGTTGTTGCTGA |
Retrieve as FASTA
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CDS►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
ATGGCCGCCAAGTGCTACCCAACAGTCACCGATGAGTACCAGACGGCCGTCGCCAAGGCCAAGCGCAAGCTCCGCGGCCTCATCGCCGAGAAGAACTGCGCCCCTCTCATGCTGCGCCTC GCGTGGCACTCGGCGGGGACCTTCGACGTCGCCACCAAGACCGGCGGCCCCTTCGGAACCATCAAGTGCCCCGCGGAGCTCGCGCACGGCGCCAACGCGGGCCTCGACATCGCCGTCAGG CTACTCGAGCCCATCAAGGACCAATTCCCCATCCTCTCCTACGCCGACTTCTACCAGCTCGCTGGAGTCGTGGCCGTCGAGGTGACCGGCGGACCTGAGGTTCCATTCCACCCGGGCAGA CAGGACAAGCCTGAGCCTCCTCCAGAAGGCCGCCTTCCTGATGCCACCCAAGGCTCTGACCACCTCAGGCAGGTATTTTCCACTCAGATGGGTTTGAGCGACCAGGACATTGTTGCGCTT TCTGGTGGTCACACCCTGGGAAGGTGCCACAAGGAAAGATCTGGCTTTGAGGGAGCGTGGACTGCCAACCCTTTGATCTTTGACAACTCGTACTTCAAGGAGCTCCTGAGTGGCGAGAAG GAAGGCCTTCTTCAGTTGCCGACTGACAAAACCCTCCTGTCCGACCCGGCCTTCCGCCCACTCGTGGATAAATATGCTGCGGATGAGGATGCTTTCTTTGCTGACTATGCTGAGGCACAC CTGAAGCTCTCTGAGTTGGGATTTGGCGGGTACTTCGAAGGTTGTTGCTGA |
Retrieve as FASTA
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cDNA►
Send to BLAST
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2 |
CCGCCCACAT TCAATTCAAT TCCCCATCGC GCAGCCATGG CCGCCAAGTG CTACCCAACA GTCACCGATG AGTACCAGAC GGCCGTCGCC AAGGCCAAGC GCAAGCTCCG CGGCCTCATC
GCCGAGAAGA ACTGCGCCCC TCTCATGCTG CGCCTCGCGT GGCACTCGGC GGGGACCTTC GACGTCGCCA CCAAGACCGG CGGCCCCTTC GGAACCATCA AGTGCCCCGC GGAGCTCGCG
CACGGCGCCA ACGCGGGCCT CGACATCGCC GTCAGGCTAC TCGAGCCCAT CAAGGACCAA TTCCCCATCC TCTCCTACGC CGACTTCTAC CAGCTCGCTG GAGTCGTGGC CGTCGAGGTG
ACCGGCGGAC CTGAGGTTCC ATTCCACCCG GGCAGACAGG ACAAGCCTGA GCCTCCTCCA GAAGGCCGCC TTCCTGATGC CACCCAAGGC TCTGACCACC TCAGGCAGGT ATTTTCCACT
CAGATGGGTT TGAGCGACCA GGACATTGTT GCGCTTTCTG GTGGTCACAC CCTGGGAAGG TGCCACAAGG AAAGATCTGG CTTTGAGGGA GCGTGGACTG CCAACCCTTT GATCTTTGAC
AACTCGTACT TCAAGGAGCT CCTGAGTGGC GAGAAGGAAG GCCTTCTTCA GTTGCCGACT GACAAAACCC TCCTGTCCGA CCCGGCCTTC CGCCCACTCG TGGATAAATA TGCTGCGGAT
GAGGATGCTT TCTTTGCTGA CTATGCTGAG GCACACCTGA AGCTCTCTGA GTTGGGATTT GGCGGGTACT TCGAAGGTTG TTGCTGATTC TGGTTTGGTG CATGAAGTTG GTATGAAGGC
GAAGAAGAAG AATAAAATTG TGGGCCTGAG GCCATGTGAT GTGTTGTTTG GATTTGGTTA GATGGACGTT GGAATTCCAT TGTGTTGCTT GCTTGACATC TATGAGCATA TTGTTGGAGG
GACGATGGAA ATGTTATGTA ACTTACCTGT TCCCTCCGTC TAAGATGAAC CGGAAATTTG TTTACCCTCT GTCGGCTGGG TTCATTTCTG GAACCAAATT TCACTGTTTT AATTATTTTG
TCTTGGTGTC AGCTTGTTTG TTCACGACCA TTCGTGCATC TTTTTTTGTT TCTTGTCAAA TAGTTTTTAC ACTTATAAAG ATTTTACACT CACAAAGATT TGAGTTTACA TTTGTAAAGA
TCTGAGTTGG TGGTCGCGAG TTCATTCTAA CAAGACAACT ACTTAAGGCT ATAGGAATCA TCTAATTGTG ACTCATTTTA TACGTATCAT GATCTTTTGA CTATGGTTGA TTGGTTTTCA
TGACTTTCAA GAGTAATTGT ATTTTTCAAA AATAATAT
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Retrieve as FASTA
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