Entry information : PnodAPx[P]05-1A(Potnod000001gxxx)
Entry ID 18749
Creation 2023-05-22 (Christophe Dunand)
Last sequence changes 2023-05-22 (Christophe Dunand)
Sequence status theoretical translation / pseudogene
Reviewer Not yet reviewed
Last annotation changes 2023-05-24 (Christophe Dunand)
Peroxidase information: PnodAPx[P]05-1A(Potnod000001gxxx)
Name PnodAPx[P]05-1A(Potnod000001gxxx)
Class Ascorbate peroxidase    [Orthogroup: N/D] N/D
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Potamogeton nodosus    [TaxId: 99363 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PnodAPx[P]05-1A
start..stop
S start..stop
PotacuAPx01 208 6.74e-69 1..129 167..302
MeAPx09 139 5.2e-42 1..123 142..270
HaAPx03 137 1.57e-41 1..123 142..272
MtAPx05 134 5.16e-40 1..128 142..275
Literature and cross-references PnodAPx[P]05-1A(Potnod000001gxxx)
Protein sequence: PnodAPx[P]05-1A(Potnod000001gxxx)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   130
PWM (Da):   %s   14540.32 Transmb domain:   %s   o104-126i
PI (pH):   %s   9.13
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
VFYRMGLSDK DIVALSSGHT LGKAHRERSG FEGAWTKEPS QFDSSYFNC* SFQLTRHYLK IDAAFHGYVT LYAKDEHAFF KDYAESHKKL LSELGFSRSC KQVSWISMTQ IAIGVGIVSA 
AFVGHLCKKK D 

Retrieve as FASTA  
Remarks Only 3'end with stop in frame. ptg000001_1016763_1017567
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GTCTTTTATC GGATGGGTCT TTCAGACAAG GATATCGTTG CATTGTCGAG TGGCCATACA TTGGTAAATC ACTTCCAAAA AATCAACTTT TCCATAATTT ATCATATAGA ATATCAACTT  ATGCTGCACT CTAGGCAATG CCGCTTAATA TGTTTTGTTT GTTCTTGTTT AAAGGGTAAG GCACATCGTG AAAGGTCTGG TTTTGAAGGT GCGTGGACAA AAGAACCTTC ACAGTTTGAT  AGCTCGTACT TCATGTAAGA CCACACAAAT ATGATAATTG ATTTCTGTGG AAGTATCCAG CAGGTTATTG GCTAGATAAT AATCGGTTGT ATATTAATTA CTTTTAGTGT TAAAAACTAT  TAGTCAATTA TATGGTTAAA TTATTTGTCA GTGAATTGCT AAAAAAGAAC AACAAGGAAC TGTTGAAGCT TCCAACTGAC GAGGCATTAC TTAAAGATCG ATGCTGCATT CCATGGATAT  GTTACCCTTT ATGCGAAGGT GCAGTTACTT TGACATGGTT TGACTAATGT CCCGATTTCA TTCCGTTGAT CCGAGTGCTG TAAAAGTATA GCGCAGTTTG TTGTTGGTCA TCATACTAAT  TTTTTTTTTC ACTTTTCATG CAACTTCAAC AGGATGAGCA TGCATTCTTC AAGGATTATG CTGAATCGCA CAAGAAATTA AACTCTCCGA ACTTGGCTTT TCTCGTTCAT GTAAGCAGGT 
TTCTTGGATA AGTATGACAC AGATTGCTAT CGGGGTTGGT ATTGTGTCTG CAGCTTTCGT TGGCCACTTA TGCAAGAAAA AGGAC 

Retrieve as FASTA