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Entry information : HaPrx18 ( HanXRQChr08g0222541)
Entry ID 1880
Creation 2005-09-27 (Christophe Dunand)
Last sequence changes 2016-04-27 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2017-11-23 (Catherine Mathe (Scipio))
Peroxidase information: HaPrx18 ( HanXRQChr08g0222541)
Name (synonym) HaPrx18 ( HanXRQChr08g0222541)
Class Class III peroxidase    [Orthogroup: Prx006]
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Helianthus
Organism Helianthus annuus (Sunflower)    [TaxId: 4232 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value HaPrx18
start..stop		 S start..stop
LperPrx33 585 0 8..325 4..321
NtPrx11-1A 518 0 13..325 9..321
NtPrx11-1B 514 0 13..325 9..321
CiPrx04 508 0 59..325 1..267
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1880' 'join(55578528..55578752,55579312..55579503,55579613..55579778,55580200..55580594)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 55578528..55578752 223 N° 2 55579312..55579503 190 N° 3 55579613..55579778 164 N° 4 55580200..55580594 393
join(55578528..55578752,55579312..55579503,55579613..55579778,55580200..55580594 )


exon

Literature and cross-references HaPrx18 ( HanXRQChr08g0222541)
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L.,Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project
DNA ref. HanXRQ genome:   HanXRQChr08 (55578528..55580594)
EST ref. GenBank:   GE507029.1 [5' end]  AJ541430.1 [3' end]
Cluster/Prediction ref. HanXRQ:   HanXRQChr08g0222541
Protein sequence: HaPrx18 ( HanXRQChr08g0222541)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   325 (297)
PWM (Da):   %s   34540.14 (31597.7) Transmb domain:   %s   i12-34o
PI (pH):   %s   9.51 (9.35) Peptide Signal:   %s   cut: 29 range:29-325
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVFSSSSSSSSVLLKYALVMFFMGVVSAQLSTNFYSSSCPKLLPT
VRSAVQSAISKETRMGASLLRLHFHDCFVNGCDGSILLDDTSSFTGEKRAAPNFRSARGFEVVDNIKSAVESVCPGVVSCADILAISARDSVHILGGPTWGVKLGRRDSRTASQAAANNSIPPPTSSLSALISSFRAVGLSAKDMVALSG
SHTIGQARCTNFRARIYNETNNLDASFATQRRSNCPRATGSGDNNLAPLDVQSPNAFNNDYYKNLINQKGLLHSDQQLFNGGSADSTVRQYSSNPGQFSADFAAAMIKMGDNKPLTGSSG
EIRKNCRRPN

Retrieve as FASTA  
Remarks Complete sequence from genomic and 1 EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTGTTCTCTTCTTCTTCTTCTTCTTCTTCAGTTCTACTGAAGTATGCACTTGTTATGTTTTTTATGGGAGTTGTTTCGGCTCAACTTTCAACTAACTTTTACTCGAGCTCTTGCCCA
AAACTTCTCCCGACTGTAAGATCAGCCGTGCAATCGGCTATTTCAAAAGAAACTCGGATGGGAGCTTCTCTCCTTCGGTTGCACTTCCATGATTGCTTTGTCAATATGTATATTTCTTTA
TTTGTTTTCTCATCCTTTTAGACTTTCTTTCAAATTTCTGAGCACACATGCGCGTACACACACAAAGCGCGGCGTGTTTGTCTATATTTACATATATAGGCATGGTCAATACACATCATA
TGTGTCTATATATACATATTTAGGCATGGTAATTACACATTAGTTGTGGTGAGACAAAAAAAAAATGAGAGATATAGTCATATAACACCATAATGGAATGAATGAATTTTTTGGGAAGCA
AATAGCCATTTCCATTTTTTACTTTAGAATATTTATGTTAACGTCAACACACATATTAAATAAAATCACCAAGAGTATCAATAGGCAAGAATGAACCAACATTTAGTACTAGTTTTCTAG
AAAATCATCATTAAGATATTCAAATATGCTACATGGTGACAACTAGTAAAGTCAAACTTAACTAATATGATTAATTATATCGTAATCATGTAGTAACGAGGCTTTTAAGAAAAAATGTTT
CAAGTTTACATATATTTTATTTTAACTTTTGTTAACTATACTTACCAACATATCATTTTCGATCAGGGATGTGACGGTTCGATCCTTCTTGATGATACATCCTCCTTCACCGGTGAAAAG
CGTGCAGCTCCTAACTTTAGATCCGCTAGAGGGTTTGAAGTGGTGGACAATATAAAGTCGGCTGTCGAAAGTGTATGCCCTGGTGTGGTCTCGTGTGCTGATATACTCGCTATTAGCGCT
AGAGACTCCGTTCATATTTTGTAAGTTTCTTTTCTTATCATGTTAGTGTTTGGATTGAAAGTTAATCTAGCTACTAACCATCAAAATTAAGGTTTCAAAAGAAATGCTAACCTAGTGTTT
ATAATGAAGCTTGGTGGACCTACTTGGGGTGTTAAATTGGGAAGGCGCGACTCAAGGACCGCAAGCCAGGCTGCAGCCAACAACAGCATTCCTCCACCCACATCGAGCCTCAGTGCACTC
ATCTCTTCTTTTAGGGCCGTTGGTCTTTCGGCTAAGGACATGGTGGCTCTATCAGAGGTCAACATCCCCCCCCCCCCCTCTTGACTTTAAAACTAGTTAATTTTTTAAAATGTTTTATGT
CAAAAAGTAAATTAGAATATTTTTTGTCAAATAAAAAAGAAACAAATGTCAACAACCATCAACTTAAATCATTTTATCCACTCTTCTCGCAACCGGACTTGTTTGGTTGAGCCTTCTTAA
ATCATCTTCATTTGAACCGGTCACTTACAGGTTGAACCAGAGGAATTGGCGAACCAAACAATGGTTGGGCTTGATTTAAATAAACATTTTCATATTTTATTTTTTTAAAATCAGTTATAT
AACCGGTCTGTCCGGTGGATCGATAAGATGACCAGTTCAGTGACCGCTTTGACCGAGTATAAAAAGATTAAATTTTAAATATTGACCGATTGATATACTATCTTGGAAACGAAAACAGGT
TCCCACACAATCGGGCAGGCACGGTGCACCAACTTCCGAGCCCGAATCTACAACGAAACCAACAATTTGGATGCTTCTTTCGCTACACAAAGGCGGTCCAACTGCCCGAGAGCCACGGGC
TCTGGTGACAACAATTTGGCACCACTTGATGTCCAGTCTCCAAACGCTTTCAACAATGACTATTACAAGAACTTGATCAACCAAAAGGGGTTGCTCCACTCTGATCAACAACTGTTCAAT
GGCGGTTCGGCTGATTCAACCGTCAGACAATATAGCAGCAACCCCGGTCAATTCAGTGCCGATTTTGCCGCAGCCATGATCAAGATGGGTGATAACAAGCCACTAACTGGATCCAGTGGA
GAGATCAGGAAGAATTGCAGGAGGCCCAATTAA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTGTTCTCTTCTTCTTCTTCTTCTTCTTCAGTTCTACTGAAGTATGCACTTGTTATGTTTTTTATGGGAGTTGTTTCGGCTCAACTTTCAACTAACTTTTACTCGAGCTCTTGCCCA
AAACTTCTCCCGACTGTAAGATCAGCCGTGCAATCGGCTATTTCAAAAGAAACTCGGATGGGAGCTTCTCTCCTTCGGTTGCACTTCCATGATTGCTTTGTCAATGGATGTGACGGTTCG
ATCCTTCTTGATGATACATCCTCCTTCACCGGTGAAAAGCGTGCAGCTCCTAACTTTAGATCCGCTAGAGGGTTTGAAGTGGTGGACAATATAAAGTCGGCTGTCGAAAGTGTATGCCCT
GGTGTGGTCTCGTGTGCTGATATACTCGCTATTAGCGCTAGAGACTCCGTTCATATTCTTGGTGGACCTACTTGGGGTGTTAAATTGGGAAGGCGCGACTCAAGGACCGCAAGCCAGGCT
GCAGCCAACAACAGCATTCCTCCACCCACATCGAGCCTCAGTGCACTCATCTCTTCTTTTAGGGCCGTTGGTCTTTCGGCTAAGGACATGGTGGCTCTATCAGGTTCCCACACAATCGGG
CAGGCACGGTGCACCAACTTCCGAGCCCGAATCTACAACGAAACCAACAATTTGGATGCTTCTTTCGCTACACAAAGGCGGTCCAACTGCCCGAGAGCCACGGGCTCTGGTGACAACAAT
TTGGCACCACTTGATGTCCAGTCTCCAAACGCTTTCAACAATGACTATTACAAGAACTTGATCAACCAAAAGGGGTTGCTCCACTCTGATCAACAACTGTTCAATGGCGGTTCGGCTGAT
TCAACCGTCAGACAATATAGCAGCAACCCCGGTCAATTCAGTGCCGATTTTGCCGCAGCCATGATCAAGATGGGTGATAACAAGCCACTAACTGGATCCAGTGGAGAGATCAGGAAGAAT
TGCAGGAGGCCCAATTAA

Retrieve as FASTA