Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
260 |
| PWM (Da): |
27942.33 |
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| PI (pH): |
6.58 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GCDASVLLKS TKGDAERDAH HNLTLRPEAF AVIDAAKAAI EEECPGIVSY ADILTFAARD SAAHAAGHIF YDVPSGRRDG LVSHISEVDL PSPFEDAATL IRRFAEKNLT ADDLVTLSGA
HSIGVAHCGT FRNRIFQNTS TQIDPTLSLS NGELLEAKCT RTPSPTTTVR LDLITADLLN NKYYVGLQNN LGLFTSDHAL TTVHELNEAV DENAKFPGLW ARKFKVAIVK MGAIEVLTGR
HGEIRKKCSA INGRHSTAVE
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Retrieve as FASTA
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| Remarks |
Incorrect prediction from Lemna.org. Exons 1 and 2 are missing. Par of exon 1 found upstream. |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
TTCTTGGCCT GTCTTTGGTG AAGCAGTCTT CTAGCTCCAC CTGGTTATTG TCTTGGTTCC CTTTGAATAC TTAGTCTTTG ATGGGAAATG ACAAGAAATA AAGTTGGTCT TTTAGAATAG
CATCAAGTGT TTGATCTAAT AATATAGTAT AGTTATCTGA GCTTGATGGT CATCTTGGCC CAGTAATACT TCAAGCCCAA TAAGGGCCAG ATCTCTTGTC CCACTTTTCA TCCTCTCCTT
ATCTTTAGTC TCACATTAGA AGATTAGAGA ACTCGGCTGT CCCTCTTGCT ATATAAGCAA GGGAACGCCT CCTCTTGTAA TCATCTCGAC GGGAATCAAA GCCCTTTTTG TCACCATGGT
ATCAGAGCCA TGAGGTTGTC TTTCCGACAC TGTCGTCTCT TCTTGACGTC GTGTCCCTCC CCAACATTCT CTCTGGCGCC GCTTTCTCTC CAGTGCCTCT CCTCTCTAGT GTTTCCTCCT
CCGGCCCCAT CATCTTCCTC GACACTGCTA TCTGCTTCGG CGGCCCTCTA CCTCTCATTC GTTGCGATTG TTACCGTCTT CCTCCTCAAC ACCGCAATCT GCTCCAGTGG CCCTTGGCTG
CCTCTCCTCC GGCAATCCCT ACCGTCCTTT CCCCCCCTTT TTTTTTTCCG GCGCCACAGT CATCCTCTTC TATCATCGTC GCCAGCCTCC TCCACCACCG TCGTCGTCAC CATCTTCCTC
TGGCGGTTGT CGTCGCCAGC CCCTTCTGCC ACCTCCAGCC CCTTCTGCCG CCTCCTCCAC CTTCAACGTC ACCACCGGCC AACCTGTCAC GACAACCAGC AGAGAACGAC GGCGAGGGTT
TCCCCAGCCA CTAGGCCTCC TGCAAGCCCC TCTTCTCGGT GAACTAGGCG GCCCGTCTCG TGTGAACTGA CCACTCCAGC CGGCCAACCG GTCCAGCCGG TTGACTTGGG GCTTGGTTCA
ACCGGGCCCA GGCCTTACGC GAGCCCGCTC AGGCCTGCCT CTTAAGCGGG CCCAGCCACT GGGTCTACCG CCCAGGCCCA TCTTTGCAGG CCCACTAAGT CGCCCAGAAG AAAGAAAAAA
AAGGGGAGGA ACAGAAAAGA AATAGAAAAC AAAAAAAAGG AGGCATAGTT CATTATTCTT TGGGTCTTCC AATGGCCTCC TCCGACTCCG GGGCTCCCTC TGGCTCCGTC GGCCCCCCAA
AAACACCTTT ATCTTCTCCA CCAACGGCTC CTATGCCTTC AGAGCTCCTT CCTTCCACTC TTCCTCAACT CATGGCTCCA CCGATACGTC ACTCCATTAC TACTCAGATC ACTCGTCCGG
CGTACATCTT CAACGGTCAA AACTACTTCC CCTGGGCCTC TAGCTTCAAG CTCTTCCTTT GCTCTCACGG CCTTCTTCAG CATCTCTTAG CGGACCCTCT TGATCTCCGC CATCCGTCGT
ATGTGAGCTC GTCACAACTC GACTTGGCCG TTATCACTTG GATGCTCTAA AGCATCGAGC CAACTATCGG AGAACCTCTG GCACACATCA CTCCAGCCCG TCTCCTCTTG CAAAATCTTG
AGACTATGTA TGCGAATCAG ATGAACATTA GTTGCATCGT CGAGCTCTTC AAGTCTCTTC TCTCCTGCAA GCAAGGCGAC CTCTCACTTC AGGCTCATTA CAGTCACCTT TAGGCCCTTA
TTCAAGAGGT CGACGTCGAT CAACCTCTCA CTACGGACCT CCAGACTCTT CGACGTTATC GCTAGGAGCT CTATACTGGG ATCTACCTCA GTGGACTTCA TCCATCCATC TCATCCCAGA
TTCGTGGGAT TGTTCTCTCT AGGGATCGTG TACCGGATCT GACTTCCCTT TTCTCTGCAG CACTCAAGGT GACTACTGGT GCATCACTTC CCAGTTCATC CCCTTCCTCT ATGGCTACTC
CTTTTGCTCT TGTTGTGACT GCTCGCTCTT CTCGAGATGA GTCTTCACAA TCTCGCACTG ATGGCGATTG TTCTCGCGAA
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Retrieve as FASTA
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DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCCTCACG GCCTTGAAGA AAAATCCGAT CCCTGCTCAA TAGCCATGGA GGATCAAGGC AACAGCAGTG AACAAGCCCT TGCAGCAATC TTGGAGCCCG ATCCACAACA AGTAGCAATG
GCGAATATCA ATCCTACAGG TTTGCTAATC TCTCTCAAGT TAACACGAGA AAATTATTTG TTATGGAAGC CACAACTTCT TCCAGTTCTT GCGGCTTATG ATCTTGAAAA TATTCTGGAT
CAAGATCCGC CGAGTATCAT GATTACAAAG TCGGATGGAC AAATATGCCC AAATCCCGCA TACAAAATAT GGTACAAGAA TGACAAAGTC GTTCTTGCTA TCATAACATC GTCTCTTTCA
GAAAGTACTA TGCCACTTGT AGTAGGAAAA ACTACAGCTA AAGACGCCTG GCAAGCCATC AACAAGAACC TTGCTGCAAG ATCCCGATCA AGAATAATGG AAACTCAAAC TCGACTCAAT
AACTTTCGGA AAGGAGATCT ACCTCTTGAT GTTTACATTC AGACGATCAA AAGCATGGGA GATGAACTAA AGGCATGTGG ATGTGACATG GAAGAAGAAA ATCTCACCTT TGCTCTGCTC
TGTGGGTTGA GTCCACCATA TAATGCCTTT TATGCAAGTA CTAATCCACT TCTTGATACT TTGACCTTCG ATGATGTAGT ATCAAACCTC AGGACATATG AATCACATTT AGTCAGACAA
AGTCAGGAAC AAAAACCCTC AGAGTTCCCT CCATCTGCCA ATTATACACA AGCAAATCAA CATGATCAAG GACAGAATAG AGGAGGTAGA GCTAATAGAG GAAAAGGACG AAATCAAGGC
AGGACAGCCC CTCGATGTCA ATTATGCTAC AAGATCGGGC ATAGAGTAGT TAATTGCTAT GAAAGATACA ATAAAGACTT TGTTCAGCCT CCATGGGACC CAAAACAAAA CTACAACAAT
TCAAAATCTC ATCAAACCCA AGCAAATGTA GCTACAGTAA ACCAAGGACA TGGGCAACAG AATATTACCT GGTATCCAGA TAGCAGGGCA TCCCACCATG TGACTCCCAC AACTGAAGCC
ATGCGTGATC ATGCCAATTA TCCAAGGGGA GATCAACTCT ACATCGGAAA CGGACAAGGT TTGCCTATAT CTTCCATTGG AAATTCTTCC TTTATTACAA AAGATAGAGA TTTAAAATTG
AATAATATAT TACATGTGCC ATTAATCACT AAAAATTTGC TCTCGGTACA CAAATTCGCA CTTGACAATA ATGTATTTTT TGAGTTTCAT GCATTTTATT GCTTGGTGAA GGACATCAAA
ACAGGGAAGG TTCTTCTCAA GGGCCCACAT AAGGATGGAC TTTATCTGCT AAACAAAATC CAGGAATGCT CTGCTTTGAT TGGACAACGT GCATCACCTG AAACTTGGCA TAACAGATTA
GGACACCCTC ATTTCAAGTC TTTTCAAAAC ATTTTACAAA AGTTTGAAAT TCCAATTTCT CATCGAGCAA CTCATTTTGT TTGTGATGCA TGCGCTTCTT CCAAATCTCA CAAATTACCA
TTCAAGATTT CTTTACATAA AACTACAAAA CCTCTTGAAC TTATACACTC AGATGTCTGG GGACTTGCAC CAGTAACTTC ACATTTCGGT TTTAAGTACT ATGTTATTTT TTTAGATGAT
TTTTCTAAAT TCACTTGGTT ATTTCCAATG AAAATTAAGT CTGAAGTATT TTCCATTTTT ACTGATTTCC ATACTAAAGT AGAAAAACAA TTTAGTGAGA AGATTCTTGC CCTTCAATCC
GACTGGGGTG GGGAGTTTCA AAGTTTAACC TCATATCTAA AACGACATGG CATTCACCAT AGGGTATCAT GCCCTTACAC CCCAGAACAA AATGGTACAC CCGAGAGGAA GCATATGCAC
TTAATTGAAA CCTCGCTTTC GTTACTCAAG ACTGCCTCAT TACCCACACA ATTTTGGGAT GAGGCAGTAT GCACATCCGC CTACCTTATA AATAGAATGA CAACCCCTCT ACTGAAAAAC
AGGTCACCCT ATGACATTTT ATACAAAGAA ACCCCAAACT ATAGTTTATT AAAAACATTC GGATGCCTAT GTTATCCTCA CTTGCGAGCA TACTCAGCTA ACAAGCTTTG CACCAGGTCA
GAAAAATGTA TCTTCTTAGG ATATAGTTCT ATGCATTTAG GATATAGGTG TCTCTCAGTA ATATCAGGTA AAATGTATAT TTCAAGAGAT GTTATTTTCT ATGAAAATAT TTTTCCTTTT
CCTCAATCCA AAGAGAGCTC TCAACCCATC AACAATGGAG CACCTGGTAT ACTGGGACAT GGACCAGTAA TTATTCCCAT TTCGGAGCAA AATCATTCAT CATCAACTCA GACAATAGAT
CCAGTTGCTA CAAGATATGG TCAACCAGGT GGTCAAACTA TCAACACAGA CACACCCGAT GTAAGTTCTC AATTTCCTTC TCAAAATCAT TCATCATCAA CTCAGACAAC AGATCAAGTT
GCTACAAGGT ATGGTCAACC AGGTGATCAA ACTATCAACA CAGACACACC CGATGTAAGT TCTCAATTTC CTTCTCAAAA TTCTGCTTCC TTAAATGAAG ATATACATTT TCGGGTTGGC
ATCTCACCAG AATTGCCTGA GTCTCACACC CAAAAAGTGA ATGGGAACAC TGAATCTCCT ATGTCTACAC CTCCCAAGAA ATTTAGATCT CTGACAGACC TATACACCAA AACCCAACAA
GTAACCAAAT ATCCTCTTCC GGAATGTTAT CTATCACTGA AAGAACAAGT AGAACCCATT AACCATATAC AGGCTCTCAA ATCACCCATT TGGACTAAAG CTATGAATCA AGAATTCAGA
GCTCTGATAG AGAATCATAC CTGGGAACTT GTACCTAGAC CTCAAAATAT AAATGTCATA GGTTGTAAGT GGATCTACAA AATTAAGTAT AATTCTGATG GCACTGTTGA CAGATACAAA
GCTAGGTTAG TTGCTAAAGG ATATAAACAA GAGTATGGTT TTGATTACGA GGAAACATTT AGTCCTGTAA TCAAAATCAC CACAGTCCGG TTACTAATTT CCTTAGCATT AATGAATAAT
TGGCACATCC ATCAATTGGA TGTGTCCAAT GCTTTCTTAC ACGGATATCT TACAGAGACA ATATTCATGA GTTAGCCCCC TGGATTCTCT AACTCAAAAT TTCCCGATTA TGTGTGTAAG
TTGAATAAAT CATTATATGG TTTAAAACAA GCGCCGAGGG AGTGGTTTAA AAGATTATCT TCTCATCTAA TTGGTCTTGG TTTCAAGGGT TCGAACACTG ATCCTTCACT CTTCTTTAAA
TACCATGATT TAATACCATA TTTCCTTTTA ATATACGTTG ATGATATTCT CCTTATTAGC CCTCACAACT CTGGAATTAA TCACATCATA AATTCTTTAA GAGATACCTT CTCTATCAAA
GATTTAGGTC CTGCTCATTT CTTTTTAGGA ATTGAACTCA TTCGGAAAAC TGAAACGTTA TCTTTCTCAA TCTAAAAATG CTTTGTCCAT TCTCAAAAGA GCAAACATGG AGAATTCTAA
ACCAGCCTCC AATCCATGTT CCTTTATAGA TAATGCAGAC TCGCAAACAA TAACTATTGA TCCATCAATT TACCGAAGCA TTGTAGGAGC ATTATAGTAC CTAACCCTCA CAAGACCAGA
CATATCCTTT GCAGTTAATA AAGCTTGCCA ATCAATGCAT GCTCCTACTG AACTAGACTG GCTAAGAGTG AAACACTTAG ATATATCAAG GGGACATTAT CGGATGGCTT ATGTTATCAG
CTTAACTCTG CTTTTTCTCT AGAAATTTTC TGTGATGCAG ATTGGGCAGG GTCCGTGACT GATAGACGAT CTACCAGTGG CTATCTTCTT TATCTTGGTA AGAACTTGAT CTCTTGGAGT
TGTCACAAAC AAAAGACTGT GGCTCGCTCC AGCACAGAAG CTGAGTACAA GTCCATCGCC GATGCCACAT CAGAAGTCAT TTGGCTCAAA TCTCTTCTCC AAGAATTAAG TATCCCATTG
AAATCTATTC CTATTATTTG GTGTGATAAT ATAGGCGCTA CTTACCTTAC CTCTAACCCT GTGTTTCATT CACGAATGAA GCACATAGAA ATTCATTACC ATTTTGTAAG AGAACAGGTG
AATTCAAAGC AACTCCGAAT TGGTTATGTC ACTACCAAAG ATCAAGTTGC AGATCTTCTA ACAAAAGCTT TGCCAAAGGG TCGGTTTCAC TTTCTCAAGT CCAAGCTCAA CATCCTTCCC
ACGGTGAGCT TCCGGGGGAA TATTGAAGCA AATCGTCTAA CATGTAGGGA CACTGAGCCA ATTCAGTGTG AAGCGTCTCC AAACGGCGTG GCTGAGTCAA CTCAGCCTGG ATCAGTTTTT
AGTAAACCCT TACGCCGGCC ACATCTTCTA CGACGTCCCC TCCGGCCGCC GCGACGGCCT CGTCTCCCAC ATCTCCGAAG TCGACCTCCC CTCCCCTTTC GAAGATGCCG CCACTCTCAT
CAGACGCTTC GCCGAGAAGA ATCTCACGGC CGACGATCTC GTCACCCTCT CCGGCGCCCA CTCCATTGGA GTCGCCCACT GCGGGACCTT CCGGAACCGC ATCTTCCAGA ACACCAGCAC
GCAGATCGAT CCCACTCTGA GTCTCTCCAA TGGCGAGCTG CTGGAGGCAA AGTGTACGCG TACCCCCTCG CCGACGACGA CGGTGAGGCT GGACTTGATC ACCGCAGATC TTCTCAACAA
CAAGTACTAC GTGGGACTCC AGAACAACCT CGGGCTGTTC ACTTCCGACC ATGCGCTGAC CACTGTGCAT GAACTCAACG AGGCGGTGGA CGAAAACGCT AAGTTCCCGG GTTTGTGGGC
AAGGAAGTTC AAGGTTGCAA TCGTCAAGAT GGGAGCAATC GAGGTGCTAA CAGGCCGCCA TGGAGAAATC AGGAAGAAGT GCAGCGCCAT TAATGGCCGC CACTCGACTG CTGTGGAGTG
A
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCCTCACG GCCTTGAAGA AAAATCCGAT CCCTGCTCAA TAGCCATGGA GGATCAAGGC AACAGCAGTG AACAAGCCCT TGCAGCAATC TTGGAGCCCG ATCCACAACA AGTAGCAATG
GCGAATATCA ATCCTACAGT AAACCCTTAC GCCGGCCACA TCTTCTACGA CGTCCCCTCC GGCCGCCGCG ACGGCCTCGT CTCCCACATC TCCGAAGTCG ACCTCCCCTC CCCTTTCGAA
GATGCCGCCA CTCTCATCAG ACGCTTCGCC GAGAAGAATC TCACGGCCGA CGATCTCGTC ACCCTCTCCG GCGCCCACTC CATTGGAGTC GCCCACTGCG GGACCTTCCG GAACCGCATC
TTCCAGAACA CCAGCACGCA GATCGATCCC ACTCTGAGTC TCTCCAATGG CGAGCTGCTG GAGGCAAAGT GTACGCGTAC CCCCTCGCCG ACGACGACGG TGAGGCTGGA CTTGATCACC
GCAGATCTTC TCAACAACAA GTACTACGTG GGACTCCAGA ACAACCTCGG GCTGTTCACT TCCGACCATG CGCTGACCAC TGTGCATGAA CTCAACGAGG CGGTGGACGA AAACGCTAAG
TTCCCGGGTT TGTGGGCAAG GAAGTTCAAG GTTGCAATCG TCAAGATGGG AGCAATCGAG GTGCTAACAG GCCGCCATGG AGAAATCAGG AAGAAGTGCA GCGCCATTAA TGGCCGCCAC
TCGACTGCTG TGGAGTGA
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Retrieve as FASTA
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