Entry information : AtAPx05 (At4g08390 / SAPX)
Entry ID 1886
Creation 2006-09-05 (Christophe Dunand)
Last sequence changes 2015-06-03 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-12-15 (Christophe Dunand)
Peroxidase information: AtAPx05 (At4g08390 / SAPX)
Name (synonym) AtAPx05 (At4g08390 / SAPX)
Class Ascorbate peroxidase    [Orthogroup: APx2002]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis
Organism Arabidopsis thaliana    [TaxId: 3702 ]
Cellular localisation Stromal
Tissue types Callus
Flower buds
Flowers
Leaves
Roots
Seeds
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value AtAPx05
start..stop
S start..stop
AlyAPx05 646 0 1..372 1..370
CagraAPx05 613 0 1..372 1..373
BstrAPx05 612 0 1..372 1..367
CrubAPx05 610 0 1..372 1..372
Gene structure Fichier Exons


exon

Literature and cross-references AtAPx05 (At4g08390 / SAPX)
Literature Bevan,M., Lennard,N., Quail,M., Harris,B., Rajandream,M.A., Barrell,B.G., Bancroft,I., Mewes,H.W., Mayer,K.F.X., Lemcke,K. and Schueller,C. (1999) NCBI Direct Submission.
Protein ref. UniProtKB:   Q9STM9
DNA ref. Phytozome 12:   Chr4 (5314999..5317071)
mRNA ref. GenBank:   AY056319
Cluster/Prediction ref. Phytozome Gene 12:   19644181 UniGene:   At.22866
Omic ref. AtProteome:   At4g08390 ATTED-II:   At4g08390 Broad_Colleto:   At4g08390 ePlant:   At4g08390 TAIR:   At4g08390
Protein sequence: AtAPx05 (At4g08390 / SAPX)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   372
PWM (Da):   %s   40269.45 Transmb domain:   %s   i12-34o
PI (pH):   %s   8.58
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAERVSLTLNGTLLSPPPTTTTTTMSSSLRSTTAASLLLRSSSSSSRSTLTLSASSSLSFVRSLVSSPRLSSSSSLSQKKYRIASVNRSFNSTTAATKSSSSDPDQLKNAREDIKELLST
KFCHPILVRLGWHDAGTYNKNIKEWPQRGGANGSLRFDIELKHAANA
GLVNALNLIKDIKEKYSGISYADLFQLASATAIEEAGGPKIPMKYGRVDASGPEDCPEEGRLDAGPPSPATHL
REVFYRMGLDD
KDIVALSGAHTLGRSRPERSGWGKPETKYKEGPGAPGGQSWTPEWLKFDNSYFKEIKEKRDEDLLVLPTDAAIFEDSSFKVYAEKYAADQDAFFKDYAVAHAKLSNLGA
EFNPPE
GIVI*

Retrieve as FASTA  
Remarks Complete sequence from 13 cDNAs, 50 ESTs, and 1 genomic sequence. Three other transcript variants are predicted.
Promoter
Send to BLAST
Send to cis Analysis
Terminator +
Send to BLAST
Send to cis Analysis
DNA
Send to BLAST
CDS
Send to BLAST
cDNA
Send to BLAST