View Redoxidase 1886

Entry information : AtAPx05 (At4g08390 / SAPX)

Entry ID	1886
Creation	2006-09-05 (Christophe Dunand)
Last sequence changes	2015-06-03 (Christophe Dunand)
Sequence status	complete
Reviewer	Christophe Dunand
Last annotation changes	2015-12-15 (Christophe Dunand)

Peroxidase information: AtAPx05 (At4g08390 / SAPX)

Name (synonym)

AtAPx05 (At4g08390 / SAPX)

Class

Ascorbate peroxidase [Orthogroup: APx2002]

Taxonomy

Eukaryota Viridiplantae Streptophyta Brassicaceae Arabidopsis

Organism

Arabidopsis thaliana [TaxId: 3702 ]

Cellular localisation

Stromal

Tissue types

Callus
Flower buds
Flowers
Leaves
Roots
Seeds

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	AtAPx05 start..stop	S start..stop
AlyAPx05	646	0	1..372	1..370
CagraAPx05	613	0	1..372	1..373
BstrAPx05	612	0	1..372	1..367
CrubAPx05	610	0	1..372	1..372

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '1886' 'join(5314999..5315232,5315323..5315590,5315673..5315773,5315847..5315934,5316056..5316123,5316203..5316289,5316394..5316468,5316564..5316641,5316727..5316831,5317057..5317071)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	5314999..5315232	232	N° 2	5315323..5315590	266	N° 3	5315673..5315773	99	N° 4	5315847..5315934	86
N° 5	5316056..5316123	66	N° 6	5316203..5316289	85	N° 7	5316394..5316468	73	N° 8	5316564..5316641	76
N° 9	5316727..5316831	103	N° 10	5317057..5317071	13
join(5314999..5315232,5315323..5315590,5315673..5315773,5315847..5315934,5316056 ..5316123,5316203..5316289,5316394..5316468,5316564..5316641,5316727..5316831,53 17057..5317071)

Literature and cross-references AtAPx05 (At4g08390 / SAPX)

Literature	Bevan,M., Lennard,N., Quail,M., Harris,B., Rajandream,M.A., Barrell,B.G., Bancroft,I., Mewes,H.W., Mayer,K.F.X., Lemcke,K. and Schueller,C. (1999) NCBI Direct Submission.
Protein ref.	UniProtKB: Q9STM9
DNA ref.	Phytozome 12: Chr4 (5314999..5317071)
mRNA ref.	GenBank: AY056319
Cluster/Prediction ref.	Phytozome Gene 12: 19644181 UniGene: At.22866
Omic ref.	AtProteome: At4g08390 ATTED-II: At4g08390 Broad_Colleto: At4g08390 ePlant: At4g08390 TAIR: At4g08390

Protein sequence: AtAPx05 (At4g08390 / SAPX)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	372
PWM (Da):	40269.45
PI (pH):	8.58

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MAERVSLTLNGTLLSPPPTTTTTTMSSSLRSTTAASLLLRSSSSSSRSTLTLSASSSLSFVRSLVSSPRLSSSSSLSQKKYRIASVNRSFNSTTAATKSSSSDPDQLKNAREDIKELLST
KFCHPILVRLGWHDAGTYNKNIKEWPQRGGANGSLRFDIELKHAANAGLVNALNLIKDIKEKYSGISYADLFQLASATAIEEAGGPKIPMKYGRVDASGPEDCPEEGRLDAGPPSPATHL
REVFYRMGLDDKDIVALSGAHTLGRSRPERSGWGKPETKYKEGPGAPGGQSWTPEWLKFDNSYFKEIKEKRDEDLLVLPTDAAIFEDSSFKVYAEKYAADQDAFFKDYAVAHAKLSNLGA
EFNPPEGIVI*

Retrieve as FASTA

Remarks

Complete sequence from 13 cDNAs, 50 ESTs, and 1 genomic sequence. Three other transcript variants are predicted.

Promoter►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

ATTTCAGCCA TCTGGTCGTC GTCCGTTATA TGGACCTTTT CTTATTCTAT CGTTTTAACA TTGTAATTAC CGATTATCTT TTTTGTTGAA TAAATTTTAA ATGCTTAGGA CAAAACTAAT ATTACATGTT GTGGTTTCGG ACCTGGAGAG ATTACAGGCT TCGGCCCAAA ACTTCCTTGT ATTAAAAAAA AAAAAAGAAT AAATTTTAAA TTCTAAATAA AAAAGATATT TACTAAGGAT TTTTGTGAAA GCAATACTAA TTGCATTAAC ATTCATACAT GATTTGTATA ATTGTTTGGA GTTGGGTAAG ATGCTCGACT TCCACATTAG GGAACAAACA AAGCTAGATT AATGCACGTC TAGTGAAAGA TCCATCCCTT TGATTACTTA ACTTCACATT AGGGAAAAAA CAAAGCTAGG TTCATGCACT TCTAGTGAAT GATCCATCCC TTTGATTACT TAACTTCACA TTTAGGGAAC AAACAAAGCT AGATTCATGC ACTTCTAGGT GAAGGATATC AGGATATGCC ACATTTCTAT CAAAGAATAC GGTTAAGAAA GTCTATAGGA GGACAAAAAT AGATATGTTT TCCCAAAAAA GATTCAAAGC TCAAGTTAAA TGGAACAATG AGTTAGCAAA AAATGGTTTA ACGGGAGGAG AAATAGTGGT AGTGTCAACC AAGTCGCCTT GGTCCAGTAG TAAAGAGAGG TAATTCCTGT CACATGGGTT CGAGTAGCTT TGGCCACTGG GATTCGAGTA ATTTAACATG GGTTTTTTCG GGTTCCAGAA TTAGTCTTTG GACCTAGAAA CCCTTTAAGA TCACCTGAAT TATCAAAAAA TATATATATA GTAGTAGTGT TGTGTCCTAT GTTGAAAAGT AATATGGATC AGCTTTGGAA TTCTCCAGGA AGCAATGGGA TCATGTGGGA TCAAAAAGAA TAATAAAGAG ACCACGATTG GGCAATTACT AGGCACTTAT GTCATTGAGG TGATTAGTGG ATCATAAGAT TATGCCTACT GTTATCCTCA ATTTGACCGT ATACTATTTT CTTCTCTTTT AGCCATCCTT GAATACCTAA CCGAGGTTCA AGAATCAGTT TATGCTTTCA TGTTGGGTTG ACCTTTGTTA AATAGGTTAT CTAGTCATGA AGAGCGAATC AAGCCAAACT CTTTTTTTTT TTTCTCTTTA ATTAAAATAG GATTGTCTCT AAAATAAAAT TTTACCTAAT CCCCGATTTT GTAATTTTAC TTTTCATCTC AAAGAAATAC AAATTAATAT TACAAAATAA AAAAAAATAT GAAATATAAC CCGTCACCAT TACCATCAAG TTTTCAAAGT TTTAACGAAT AATATATCAA ATCAAAACTT TCGTGATGCA GAATTCAATC TTTAGAATTT TAAACATCTA ATACATATGA TCGTAATAAA TTTTAGAATA TACATATAAA AATGCATATT ATTTTTTACA TAATAATATC GATTTCCGTT GTTTACTATA CACGTAGCAA GACCTAAACA GTTTTAATCT GATATAGCGG AAACTAATTT TGGCACCTTA GACAATTGAT TGGTCAATTC AACCCTCAAT AAGCCCAAGT GGAAAGACAA AGAAATTTAG GGTATTTTGT CGAATGAGAC ATAATCAACT TGACTGCTCC AATAAACTGT TTTCACTAGA TGATGGATAG TAGTTCTGTT CTAAACATGG TTAATAGAGA TCCAAAACCC AATTTCTCTA TGGACTTTAT TGGTGCAACT CTTTAAGTGA AATTGAAACC TTACTTCAAC ACATTTCAAA TGTATCTACC TAATTAACTC TTTATATAAA ATTAAAAAAA ACCTTAGTGC ATAAGTGGGT AGGTGAACTT GAGTCTCTTG GCAATATGTA AAGAGGCGAA ATCAAAGTTG ATCAACAATT
AAACACAAAA ACCCTTAAGT TGACGTGGCT GTATCTCTTC CAACTCTTAA AAATCAATTA CTATTATACC CCTCAGAAAA

Retrieve as FASTA

Terminator +►
Send to BLAST
Send to cis Analysis

.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

TGGGGGCACA TAATTTACTC AACCAGTAAG CTTTCTTCTT TGTATTTTGT TTTTTTTCCT CATTCGAAAT TCCAAATGTA CATGATGTTT AACTTCTTTT TAAGCAGGAC TTATGATTTT AGAGAAACGT AGTTCAATAA TGAAAGAGAA GAAAAAGTTG ACGGAGAACT TTTCATGCGA GTACTTTTCG AGATACCTTT TGGACAATGT TTCTGGCTGT TCAAAGGATT TTGTTTAGCC GAAAGTATTT GATCGTTTTC ATGGTTTTGG GCTTTCATGT TTTTTCTTGT AATAAATTGC GGAAGTGATT ATTCAAAATC TATACAAATT TTGTCTGGGA TTGAATTATT TTATCGATGT TATAACTACA CACCCTTGGT TTTGTAGCTC AAGAGTAGCG TTGTGCCCAA TTTATCTGTC TTCTCGAAAC CTTTCAGGTA AGAGTTCATG TATCTCAATT CTCGAACAAT GGACCGAAGT GTGATTGCTA AAACCCACAC CCGGAATTTG TATATAGGGT TTATGAGGAA AGAGGCTAGA TTTTCTCAGG GAACTAAATG AAAAGAAATG ATGTGAATGA AATTTGTATA TGAGATCAGA TCAAGAGATT GAGGTTTACA AAGTGATTTT TCTGTTAAGT GTCGTTTGGG TTGAACTTCC TCCTCCGAGA TTGGCGGTCC TTTAATCTCT CTTTGTTGAC TATGCTTAGA CTATCTCCAA TGTAGAACTC TATATTTTTC TCTATTTTAG AGGTGACTAT ATTTTAGAGT AAATATAATT GATTTTTCTC TATTGTATGA CTATAAAATA GAGGAAAAGT TTAGAGATTG CTCTTTTTTG CTGTATATAT AGACTTTTTC TGTATTTTAG AGTTAACTCT ATTTTAGAGT TATACAATGA AGCAAAATCA ACTATAATTA CTCTAAAATA TAGTCAATTC TAAAATAGAG AAAAATATAG
AGTTGGGCAT TGGAGATGCT CTTAGCTTTT TGGCTCATCC

Retrieve as FASTA

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCAGAGCGTGTGTCTCTCACACTCAACGGAACCCTCCTTTCTCCTCCTCCCACAACAACAACAACAACAATGTCTTCTTCTCTCCGATCTACCACCGCCGCTTCTCTTCTCCTCCGC
TCCTCCTCCTCCTCCTCCAGATCCACTCTCACTCTCTCCGCTTCCTCCTCTCTCTCCTTCGTCAGATCTCTCGTCTCTTCTCCACGTCTCTCTTCTTCTTCATCCCTCTCTCAGAGGTAT
ATCTTCACTCTCTCCCTTCCAATTTCCTTTATCTCTTCTATATCTGAATCTGATTTTGTAATTTCCACGATCTAATTTGATTTCAGAAGAAATATCGAATTGCGTCGGTGAATCGGAGTT
TCAACTCCACCACCGCCGCTACTAAATCTTCATCTTCAGATCCTGATCAGTTGAAGAACGCTAGAGAAGATATCAAAGAGCTTCTCAGCACCAAATTCTGCCATCCGATTTTGGTTAGAT
TAGGTTGGCATGATGCTGGTACGTATAACAAGAACATTAAGGAATGGCCACAAAGAGGTGGAGCTAATGGAAGTTTGAGATTCGATATTGAGCTTAAACATGCTGCTAACGCTGTGGTAC
CTATAAGCTTTATACCATTATTACGAGTTAGTGTTATTTAGTTGTTTGCTATAAGCATTGTTTGTTGGTTGTTATTAGGTCTTGTGAATGCTTTAAACTTGATTAAGGATATCAAAGAGA
AATACTCTGGGATCAGTTATGCTGATTTGTTCCAGTTAGCTAGTGCTACTGCTATAGAGAGGTGAGGTTAATAGTTCTTAAAGGTAGTTTTTAGTTGTTGTGAATAGGTTTAGTAAAGTT
TTGGTGAGTTTTAGGAAGCTGGAGGACCGAAAATACCGATGAAATATGGTAGAGTTGATGCCTCTGGTCCTGAGGATTGTCCAGAAGAAGGAAGGCTTCCAGAGGTAAAGCGTCTCATTT
ATCGGCTTTGCCTCTGGTTCTTCGTATAACGTGGTTGTACTTTGGTTACATCATTCTATCAAATTTTTGTACTAATTATTGTATGTTTGCTCTTATGTTCGATAGATGCTGGTCCTCCTT
CACCTGCTACTCATCTCAGAGAAGTTTTTTACAGAATGGGATTAGATGACAAGAGGTGATTGCGGTTGAATTTTTTTTTAATCGTTATGGAAGATCGAGAAGTAAGCCATATTGAAAGAT
TATTGTAAGTGCAGGACATAGTTGCATTATCTGGTGCTCACACGTTAGGAAGATCTAGGCCAGAACGTAGTGGTTGGGGGAAGCCTGAGACGAAGTACACGCGGTATTATCCAGTTCTAT
AACGTATTGTTATATATGATACTGCAAATGGATCAGAACACTTTGAATATATAGTTCTTACTATGTGTTTTTTTTTTGGCATTGTAGAAAGAAGGACCTGGAGCACCAGGAGGACAGTCA
TGGACACCAGAGTGGCTGAAGTTTGATAATTCTTACTTCAAGAGGTTGCGTTTCAGAACTTTAACTCTATCTTCACACTTTGTATTTGAAAGTCTTCCTTTTTGTTTTTTCATGTTTATT
AATATAGTTGTTTCAACAGGAGATCAAGGAAAAGAGAGATGAAGATCTCCTTGTCCTACCCACTGATGCTGCCATCTTCGAAGATTCTTCTTTCAAGAGGTAACAAACTGAGGTTGAAAC
ATATCAATACGAAGAAACTTACTAAGTCTTTGCCTTTAAAACTGAAACTTCATTGCAATTGCAGGTCTATGCTGAAAAGTATGCTGCAGATCAGGATGCATTTTTCAAGGATTACGCTGT
AGCCCATGCGAAGCTCAGCAATCTTGGAGCAGAATTTAACCCTCCGGAGAGGTATGCATTCCTTTGATTTCTGTCATTTGTATTATCATCTTTAACGAAAATCGACCTTCAAATCAATTT
TTTCGTCTACATAGAAAATGTACACTGGAGCTATAGAAAATCTAAGTACTGTTGGTTTAGAATAGATAGATATCTTCTTTTTGGCGTTTAAGGAGTCTCCATTGATGAATAAATTCGCGG
GTCTTAAGAACTGATTAATGTGAATCTTTTGTGTAGGGTATCGTTATCTAA

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA

cDNA►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

GTTGATCAAC AATTAAACAC AAAAACCCTT AAGTTGACGT GGCTGTATCT CTTCCAACTC TTAAAAATCA ATTACTATTA TACCCCTCAG AAAAATGGCA GAGCGTGTGT CTCTCACACT CAACGGAACC CTCCTTTCTC CTCCTCCCAC AACAACAACA ACAACAATGT CTTCTTCTCT CCGATCTACC ACCGCCGCTT CTCTTCTCCT CCGCTCCTCC TCCTCCTCCT CCAGATCCAC TCTCACTCTC TCCGCTTCCT CCTCTCTCTC CTTCGTCAGA TCTCTCGTCT CTTCTCCACG TCTCTCTTCT TCTTCATCCC TCTCTCAGAA GAAATATCGA ATTGCGTCGG TGAATCGGAG TTTCAACTCC ACCACCGCCG CTACTAAATC TTCATCTTCA GATCCTGATC AGTTGAAGAA CGCTAGAGAA GATATCAAAG AGCTTCTCAG CACCAAATTC TGCCATCCGA TTTTGGTTAG ATTAGGTTGG CATGATGCTG GTACGTATAA CAAGAACATT AAGGAATGGC CACAAAGAGG TGGAGCTAAT GGAAGTTTGA GATTCGATAT TGAGCTTAAA CATGCTGCTA ACGCTGGTCT TGTGAATGCT TTAAACTTGA TTAAGGATAT CAAAGAGAAA TACTCTGGGA TCAGTTATGC TGATTTGTTC CAGTTAGCTA GTGCTACTGC TATAGAGGAA GCTGGAGGAC CGAAAATACC GATGAAATAT GGTAGAGTTG ATGCCTCTGG TCCTGAGGAT TGTCCAGAAG AAGGAAGGCT TCCAGATGCT GGTCCTCCTT CACCTGCTAC TCATCTCAGA GAAGTTTTTT ACAGAATGGG ATTAGATGAC AAGGACATAG TTGCATTATC TGGTGCTCAC ACGTTAGGAA GATCTAGGCC AGAACGTAGT GGTTGGGGGA AGCCTGAGAC GAAGTACACG AAAGAAGGAC CTGGAGCACC AGGAGGACAG TCATGGACAC CAGAGTGGCT GAAGTTTGAT AATTCTTACT TCAAGGAGAT CAAGGAAAAG AGAGATGAAG ATCTCCTTGT CCTACCCACT GATGCTGCCA TCTTCGAAGA TTCTTCTTTC AAGGTCTATG CTGAAAAGTA TGCTGCAGAT CAGGATGCAT TTTTCAAGGA TTACGCTGTA GCCCATGCGA AGCTCAGCAA TCTTGGAGCA GAATTTAACC CTCCGGAGGG TATCGTTATC TAATGGGGGC ACATAATTTA CTCAACCAGA CTTATGATTT TAGAGAAACG TAGTTCAATA ATGAAAGAGA AGAAAAAGTT GACGGAGAAC TTTTCATGCG AGTACTTTTC GAGATACCTT TTGGACAATG TTTCTGGCTG TTCAAAGGAT TTTGTTTAGC CGAAAGTATT TGATCGTTTT CATGGTTTTG GGCTTTCATG TTTTTTCTTG TAATAAATTG CGGAAGTGAT
TATTCAAAAT CTATACAAAT TTTGTCTGGG ATTGAATTAT TTTATCGATG TTATAACTAC ACACCCTTGG TTTTGT

Retrieve as FASTA