Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
95 |
| PWM (Da): |
10536.02 |
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| PI (pH): |
7.18 |
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Sequence
Send to BLAST
Send to Peroxiscan
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| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
CFLSFNSDNN LSPIDLRTPR AFDNAYYANL ISRQGFFHSD QELFNNGAAD SIVRSYMSRS SDCFKDFVVA MIKMGNTSPL TGSNGEIRQI CSRVN
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Retrieve as FASTA
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| Remarks |
Incorrect prediction from Lemna.org. Only part of last exon can be found. |
Promoter►
Send to BLAST
Send to cis Analysis
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Terminator +►
Send to BLAST
Send to cis Analysis
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
GGATTCCAAA AATGTCCTTT AAATAAACTA CGCGCGTCTT CACCAGTCTG AACCAAGATT AGTGGCAATG CGTGCTCTTG TAGTTGGTCT GTATCTAATA CATGATCGTA ACCAAGGTTG
GTCGAAAACA TGAGGAATAC GCGACCAATT AGTCTCCACA AATAATCCCA CCATGACTGA AAAAGTCGTG AAGAAGCGCC GCAAAATCCG GTTATCTGTA ACGTGGACGA GATGCTCTTT
TGTATGCCAT TATTCAGGAC GTTTGTCTCC TCGGCAATGA AGGAGTATAA CTTCAATAAC CCTAGCCACT GGCTAACATG CTCTCCTCTT CAAAGAACCT CTCCTTCTTG AAACTGGTGA
CCAGTGGATA ATCGACGATA GATCGCATCG TTGTCTTCGG CCGTATAGAA CCCGATAGAC CAACATTCAA CGAGGTAGAT CTTCATGACC TAATGCTACA GGGGAAGCAT AGGCACGTTC
AGAGCGTGAA AACAGAATCT TTGACAGAAA CAGTTATCCG TCCAAAAATT TAACGAACGA GCGCTGTTCT TGAACAGCAC TTCAACTTTT TTTTTTTCCT TATTATTATT ATTTACAATC
TTTCGTCGGT AGCTTATTTC ATGCCTTGAG ACAAATATTT AGAGGGAGGA TAAACAGGGT AGGGATAATT CAGGACTTGC ATGGGTATGA TCTTCTATCA CTTTCATGAC TGCAGTACAC
GTAAAGAATC CTCTAAGATA GACACTTGAG AATTGAGATA ATTTCAGCCA TAGTACCTCT AAGATAGACA TATTCAGATA TGAGGAAGTA CTCTAAGTAA ACCTTGGTAA CGTGACAATA
AGGAAATTTC TCAGATACTC GCAGAGAATA TTCGAGGAAC TATAGCGACA ATATCTTGAA AATCAGCTGA GGGCTTTATC GGATAATAGA GTATTGAGTT GGTGGACATG GATAGCGACG
ACGACGACTT CTGAATTCGC CGCTGATTCA CATTGAAGAA GAGGAAATCC ATATTGGGAT CTCTTATGAC GTTATTGTTG CGTCTACAAC AAGGATATGG CATGTGGAAC CCCTCAATTC
ACCCTGCTGC AGACCCGCCT AATCTCCCCG TTGGAGCGAG TTAGTGGGTT GATGTTGCCC ATCTAAAGCA TGGCGGCCAC GAAGTGATGG CGGACCATCC GCCACCGCTA CCTGTTGATC
CCTTCCCGAA GCCGCCGAAG ACGTGGTGAA GATAGGAAGG GAGAGAAGAA GAAGCGAACG GGACGACGTC CAGCACCCTA ACCGGCCCGA GAAACCGCCC GCAGACCGTC AGTGGCACGG
GCCACCTCTC CGGCACAAGA TCGCCACAGA GATGGCGATG CAAGGCAGTC CCGCTGACTG CCACCAAGAC GTCGATGCGC CACTTCTCCT CCTTCCTAGT CTTCGCCTTC CTTTGGTTGC
TCGTGCGGGG CATCATCGCC GTGTGTTTGT GTTTCCCCTT TTGCTTTTTG GGCCCTAGGT GTGTTAATGG GCCCATAGTT TGTGTTTCCC TTTTTATGTT TGTCCCTCTC CCTTTTGAGC
CATTGTTTGG GCCCAATAAG GGAAGACGGG CGTATCGGTG TATTCGGCCC ATTAAGGGGT CCCCCCTCCC CTCGGCCCAC TCAAACTCCT ATATAAGGAG GAGGGGATCC CCTAATTGCC
ATAGCTGAAA TACTGATTTT GAGATTGTTT GAAGAAACTT AGTGTGTGAG TAGTTAGCCC TTAAGGAACC CTAGCTTTTG GGCTCTCCCT CGGCGGCGCC GTCGGCCTCA TGCCGCCGCC
GCCGCCGAGG GAGGGCCTCC CATTGATGCG TCCTGCATCA CGAAGTCTCT GAAGAAGAAG AGTCTGCTGA AAGCGTAGGT GCGGACGATG GAGTCCGCTG AGCAGTTGTT GAAGAGCTCC
TGGTCGAAGT GGAGAAGTTC CCGGCGGGAG ACGAGGCTCG CGTAGTAGGC GTTGTCGAAG GCCCTCAGCG TGCGGACGTC
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Retrieve as FASTA
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DNA ►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCAGCACC TCGCCGCAAC CGTCGGTTAC TATAGTGCTG CGCATGCGTT CGTGCCGCGA GCGCACTACG AGTGCCAGTT CCTGGTATCC CGCGTGCACT GCGCGCGCAT CACTCGTGCT
ACCGCGTCTG CACGTGCCGT CGGTGCACCA GTGGCACCAT TTTTGGCCAC CTTGTGTGTA CCATGCATGC CACGAGCATG CCGAGTGATT TTTTGTTACT TTTTTTTGGT TTTCTCTTAA
AATAATTGTT ATAAAAATCC TTAAAAATTA GATAAATTTC TAAAAGACTA AAAAAATACT TATTTTAATA TTTTTAATAT CTTGACTTTC TAAAATCTCT ATAAAATCCC AAAAATTAAT
TTACCCTATA TCTCTAAATT TGAGTCGTGA ATTCTCCGTG GATCGACTCG AAGCCTCCTT TATACTTGAT TTATTCTATT TGGAGTTTGA TTTTTCAAAT AGTATTTGAC TTGAATCGAT
TATTTTAACG ATGATATTAT TGGTTCACCA CTATTCTTTC TCGTTATTCA CTTAAGCCAC CCTTTTGTGG CTACTTTTAC TTCTCCCCCT TCTTCTTCAC CATATTCGGA AGATCCTCCT
ACTCTTATGC TTGAAGACTG TCCGCTAGAT AATTCCTTGC AGTCACTTCT CGCTCCTCTT GCGACGATTC CAGCACCGGT CTTGGAAACT CCACTTGACA AGTCCTTAAG CTCGTTTGTA
GATCCACCAA TACTTGAAGA ACCTCTTGTT GATCTCCACC TACTCATTGC CCTTCGGAAA GGTAAACATA CTTGTACACT TCATCCCATT TCACAATTTT TTTGCTATAA CCGTTCACCT
CCCTCCTATC GTGCCTTCTC ACTTGCCCTT ACCTCCGAGT CAATACCCAA GACTACGTGG AGGTTATGAA GTTACCTCAT TGGAAAGCAA CAATGGATCT TGAGTTTGAG GCTCCTGATC
AATGCGAGAC GTGGGTGCTG GTTCCTCAAC CTCAGCACAC TAATATTGTT ACTTGTAGAT AGATCTTTAG TCTGAAGTAC AATCCAGATG AGATGATTAA TTGTCACAAA GCATGACTAG
AGGCTCGCAG ATTTACTCAG ACATACGATG TTGACTACAA AGAGACTTTC TCGCATGTGG TTCGACTTAA CTGCGTGCGC GTACTTCTTT TTTTTGGCAG TCAATGAGGG TTGGTCTCTT
CATCAACTCG ACGTCTCAAA CAACTTTCTT TATGGAGAAC TCATTGAACA AGTGCTTATG GATCAATCTC AAGGGTATAT CACTCCGGGG GGGCTGATTA GGTGTGTCAT CTTCGTCGTG
CTATTTATGG TCTCAAACAA AGTCCTCGGG CATGGTTCGC CAAGTTTAGC TAGCTTGTCC TTGCTCTTTG ATTCACTACA TGCACTATGG AGCCAATTGT GTTTCGAAAA CACACATAAG
CGAGAAGCGT CATTTTAGAT GTTTATGTCG ATGACATACT TGTCATCGGG AGTGACACTA CAGGAATCTC CCAAATCAAA AGCCACTTAT AGAAACATCT CATCATTCGG GACCTTAGCA
CCCCAAAGTA CTTCTTACGC AAAGAGTTTG CCTTCAAGCA TGGAAAGTAT GTGCAAGTTT GTGGTAGATA TATTGGAGGA TACAAGTTTA CTGGGTTGCA AACCTCAATC CTCTCATATA
GACAACAAAC CTTAGTTTTG GGATGGTACT TCTCCATCGC TTATTGATAC CAACATCTAT TGGCGGTTGT TTGGGAAGCT TATCTACTTG ACAATTACTC GACCATACGT CACTTACACG
GTCGGTCTCT TCAGCTAGTT TATGCACTTA CCACAAGAGA TTTATTAGAA TGTAGAACAT CGGGTCCTTG TATATCTCAA GCATACTCCT AGACGTGGAC TTATCTACCA GCATCATGGC
CACCTTCATG TTGAAGGATA TTCTAATTCT GGCTATGCAG GCGATCGTGG AGACCGCAAG TCCACTTTTG GATTTTGTAT TTTGGTTGGA GGAAATCTTG TCACTTGGAG GAGTAAAAAA
CAACAAGTTG TATCATTCTC AAGGTATGAC TCATACCTCA TCCGAGATAT TATGGGTGCG CTCATTACCA CAGGAGCTCA GTTTTCTAGT ATAAGAAGCT ATGTCAATGT ATTGTGACAA
CAAGGCCAAA AATCCAACCT TCCACGAACG CACCAAACAT ATTGAGATCT ACAGCCATGG CATGCGCGAT AGAGTCCTTG CCCAACTCAT CTCTACTCTT CATGTTGTTT CCACCAATCA
GGTAGCAGAT ATCTTCACCA AAGGGCTAAG CATGAATTTA TATGATGTTA TCTGTCGCAA GCTAGGCTTG TTTGACATCT ACGCTCTAGC TTGAGGGGGC ATGTGAGTAC ATATCAGCTT
ACTTAGCCTA TTGGGCCTTA GTGGCCTTAT TATCCTTTCC TTATGTACCT TTGTGGGATT AGTCCACATT GGAAGTTTAG CTTTGTAGGG CTTCCTTCTC ATTATATAAG AAGAGGCAGC
CCCTTGGTTT TAATCATCTC AATGAAATCA CTTATTCTTC TTAAGGTTGA CTTTGACCTC CTAGGGTTGA CCTTTGACTT TGACTTAAGG TTGACCTTTG ACAGAAATGG AAGAGCAAGA
TCTATTAATA GACGTATTGA AGAAGTGGTA GAGATCGATG TAGATTAATA TGTGATTTAA ATGGTGGTAA AAAACAGATG AAAATAGACG TAGATAGATT TGAAAATAGA TAGATTGGTC
TGAAAATGGA TAGATAAATA TCTCAGAAAG TAGATAGATT TCTAAATAGA AATAAGAAAG ATAGGTCGAT AGAGATATGT ATGATAACAA AGAAAAAGTA GAAAGCGATT ATGACAAGAT
AAAAAGAGAA ATCTTTGAAA TAGATTATAG ATATAGTGAG GGATTTTCAA AATAGAAAAT AGATGTAGAT ATATATATAT ATATATATAT ATATATATAT ATATATCACA TCTATTTTCT
ATTTTGAAAA TCCCTCACTA TATCTATAAT CTATATATAT ATATATGAAT CTATAACAAG AGAGACAAGA AGATGATTGA AGAAATCATG AATGTGAGAA ATAGATTAAG AAGGGATCTA
ATAGAGTAGA TCTGGATGAG AGAGAGATGT GGAGAGTGGC CTAATCACAT CAAAAGAGAA GAAAGGATAG CGAGAGATCT TTATAATCAG ATTCAAAAAA AGAAAAATAG GATAGACATA
TTTTCAGAAA TAGAAAGAAG ATGAAAGAAA TGAATGAGAG AAGAAGTCAA GTATGGAAAA TAGAAGACGA GAGAAACAAA TCAGATTGTG CGCTAGATAT CTTTGAGAGA TAAGAATGTG
AACAGATTAA AACAAAAATG ATAATCGAGA TATGTGGATG GATAGAGAGA AGATAAGATC TAAGAGCAAT GGCTAAAATA AAACGAAAAA AATAAAACTT GGAATGAGGA TCGTAGAAAG
ATGTTGCAGT CGTGAAGAGA GAGAGAAATC GATGTGCCTT GAGATCGTGA GGTGCAATGA AAGATCTTTC AAATGAGAGG GAGGGGAGAG CTTCTTGATG CTTGGGGGCT TCTTGAAGGC
TTGAGAAGGA GCTTGACGAC GCCCAAGCAA TGGGAGGAGG GATTCTCTAA CCCCTCCTCT AGGACCTCCT TTTATGGTGC AGTCATGCAC CACAAAAAGG AAGGTTGTGA GGATGTGTTT
CTTCCTATTC TCTATGTCCG AACTTGCTGC AAACTTGGCA TTTAGGGGTA TATCTATTTC TCGTTGGATG CTGACCTGGT GCTTGTCGAG TTATGAGGGA TCTGATTGGT CATGGTAGAG
GTACGTGGAG TCTTCTTATT GGTTTGATTT GAGGTCTTCT TATCTTTGAT TTGAGCATTC ATCATCGCAG CAGAGTGCTC TGTTTCCTTT CCTTCAATAG TGACAACAAC CTATCACCCA
TCGACCTGCG CACGCCGAGG GCCTTTGACA ACGCCTACTA TGCAAACCTC ATTTCCAGGC AGGGATTCTT CCACTCCGAC CAGGAACTCT TCAACAACGG TGCCGCCGAC TCCATTGTCC
GCAGCTACAT GTCTAGAAGC TCCGACTGCT TCAAAGACTT TGTTGTGGCC ATGATCAAGA TGGGGAACAC CAGCCCTCTC ACTGGCTCGA ACGGGGAAAT CAGGCAGATC TGCAGCAGGG
TGAATTGA
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Retrieve as FASTA
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CDS►
Send to BLAST
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| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCAGCACC TCGCCGCAAC CGTCGGTTAC TATAGTGCTG CGCATGCGTT CGTGCCGCGA GCGCACTACG AGTGCCAGTT CCTGGTATCC CGCGTGCACT GCGCGCGCAT CACTCGTGCT
ACCGCGTCTG CACGTGCCGT CGGTGCACCA GTGGCACCAT TTTTGGCCAC CTTCAGAGTG CTCTGTTTCC TTTCCTTCAA TAGTGACAAC AACCTATCAC CCATCGACCT GCGCACGCCG
AGGGCCTTTG ACAACGCCTA CTATGCAAAC CTCATTTCCA GGCAGGGATT CTTCCACTCC GACCAGGAAC TCTTCAACAA CGGTGCCGCC GACTCCATTG TCCGCAGCTA CATGTCTAGA
AGCTCCGACT GCTTCAAAGA CTTTGTTGTG GCCATGATCA AGATGGGGAA CACCAGCCCT CTCACTGGCT CGAACGGGGA AATCAGGCAG ATCTGCAGCA GGGTGAATTG A
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Retrieve as FASTA
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