Sequence Properties
first value : protein
second value (mature protein) |
Length (aa):  |
164 |
| PWM (Da): |
18178.19 |
|
| PI (pH): |
9.03 |
|
Sequence
Send to BLAST
Send to Peroxiscan
|
| *.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MRKKGTRAAG EAANLDLDTM NLKRDEIKDR LLLNNYYWMK WLGANSKKNQ HSQDPSLDAD LADYLKKRCP PPGTEGDTVD LDVATPKILD VHYYRNLKKG KGLLSSDQTL WAGSLTADMV
ASFSKNPQVW FHKYAGAMER MGAIDVLTGN EGEIRVKCSV VNGH
|
Retrieve as FASTA
|
|
| Remarks |
incorrect prediction from Lemna.org. Only the end of the last exon has been found, in short region containing 6 duplicated genes |
Promoter►
Send to BLAST
Send to cis Analysis
|
|
Terminator +►
Send to BLAST
Send to cis Analysis
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
AGCTTTGTCC AGCCCTCTGC CACGCCATTT ATTCCCCCCT ATTCTTTTAT TCTTCTCCTA TTTTGCACCA AATAAACGCC TTGCAGGGCT CCGCCATCTG CTATCCATCT GCGTCATGTA
ATCTCCACGA AATGTCAAAA AATTACAGGC AATAATTGAC AGGGTTCTTT ATCTCCACGT CGTGGTTAGA GTGTTATAGG CGGCGTTTCT AGCCCGGAGA GGTTGATTCT CCAGGTACGA
TGAGCATTTC CTGGTTAGTT CTTCAATACT GATCTTTTCT TCGAATTGGG TTTTCTACGA TCCATCAACC CTGTTAAATC TACGAGTGGA TCACATGATC CGTGCTCTAA GGTTCTTATT
TAATGAGGAT CCACAAGAGT GAATACATGA GATTTGTTCA TTGCGGTCTT CAATGATTGG AATTATGAAA ACATTTGGTA TAGGAGCCGG ACATGCTCCA ATTTCTTCTT TCATGTTTTG
ACCGATGATC TCTCAGTTGA TTTTTTCCGT CCCCCAAATT ATCCTTTTGG CCAAGAATTA CTAATAGTGT TCTTATTTTT AAATTGTCAG TCAACATTGG AAAGCCTCCC GATCCTACTT
GCCTACACAC ATAATGGATA CAATAAGTTG AACTCTTATC CAATGCGAAT GTTTCATAAG AGTGCCTCCA GTTAGATCAG GTGTAGTCAG TTATCTCCTA GTGGAAATAC GAGTGTTATT
TTATTTGGTT ATAGAAAAAT ATTTAGGTGT AGTTGGTTAT CCCTACTCTC TCTCTCTCTC TCATTACGCG AAATGCACTT TTCCTGATAG GAGAACGTCT CCGGCCTGTA GAAAAAATTC
TAAATTATAC GATACAGGTT GCATGGTCCC TTCCTTCATG CTTTGTTCAA AGATATGTTC AAGGAAATAC GGATAATCAA TTTAAATTTC CAGCTTCGAT TTTTCTTATC AAACACAAGG
ACAAGTGCTC AAGAACATGA AGAACAGAAA AAAAATGAGA AATAAAGTGA AAGATCGATT GGATTTGAGA GGACACCGAA TGAAAACAGA AGAAAATAAG AAAATTTGAT TGGAAACACA
GAATCACCAT CAAAGAACAG AAAAAAGAAC AAGAATTTTT CCCAGAAAAT GAAGAACGTG ATCAAGATTT TTCTAAGAAG GAAACCCATT GTTAGAACTC CCCTTGATCT TGATCTCGAT
CTTTTGGCTT CGAGGTCGCG GTTGAAACCT AGAGAAATCA AGATCCAGAT CTCTGAATGC GAGAAATTCC TTCAAATCAC AAAGATGAGA TCAAGGAATC TTGAAATGGA TTGAAGCAGA
AAACCAATCA AGAACATAAA AGAATTTTGC ACTGAACTGA AGTCTACAGC AAGAACTACC TAAGCAAATA GGAACTGGAA CAAATGAGAA CCTCGGAGAG TATTTCTACT CCCTATCCAT
AATTTTTATA GAGAGAGAGA GAGAAGCACA CTCGATTTTT AATGAAATTT TAAAGAAATG GCGGTCAATA CTTCAATTTT AACTTTTTAC TGAAATTTCA AATTTTAAAT AAAAGATTAT
GAATATTAGT TTTAGCTCTT GCACGATGAC AATGTCACAT CATCCCTCTT GCGTAGGACA GATTCGTCCT TCTTTGTCCA AAAATGAAAT TGCAGGTGGA TCTTGCTCAA GGAGGTCCAT
GAATTTGTAT GCTGCAAAAA TTAGAAGTTG TGTTTTCCAT AGCAAGAAGT TGTCCCTCAT TAGTTTTAAT TTATAGTGTT GATAGAGTGC CGTTGTTGCT TTGGAATATA GTAAGTCTGC
GGTTTCCTTT AGGCATTGTG TTGAACATAA TGTCGTTGGA TTTCCTTCTG ATCTCTAATT GGCTAAGCTT CTTCATCGTC TTCGTGAACC GGGCGCAGTG TTGAACCGGG CGTTTCCTTT
GTTTGATGAA ATGCTTCAAT AGAGAGAACT TCTGTAGAGA CAATGCCAGA AGGAGGATGA TTGGCGGCAA GAGAAAATGA
|
Retrieve as FASTA
|
|
DNA ►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGGAAGA AGGGGACAAG AGCAGCGGGC GAGGCAGCCA ATTTAGACTT GGACACCATG AACTTGAAGA GAGACGAAAT AAAAGACAGG CTATTGCTGA ATAACTATTA TTGGATGAAG
TGGCTCGGCG CAAATTCAAA GAAGAATCAG GTTTTAGGAT CAGTATGTCT ACGTTCATTC ATGCTATGAC CGATCTACTT CATCTGATCA ATCAAATAGG ACTCGGAAAT CCTTTCTAAG
TAAATCATAT AAGACTCGGA ACACAGTACG GTAGACGTCA CTGTGTTCGA GCCAAAGAAA AATCAGAGTT GCTTTTGACG TATTTTGAAT ATCCGGTTGG TGAATAAGCA CATCCCAATA
CACGTCAATG ACGGTTCTAA TCTGGTCATA GTGGTTATGC TCTCTACACC ATCAACATTC TTCGCAAGAG GGATGATGTG ACACTGTCAT CGTGCAAGAG CTAAAACTAA TATTCATAAT
CTTTTATTTA AAATTTGAAA TTTCAGTAAA AATTAAAAAT TGATGTAATG ACCGCCATTT CTTTAAAATT TCATTAAAAA TCGAGTGTGC TTCTCTCTCT CTCTCTCTCT ATAAAAATTA
TGGATAGGGA GTAGAAATAC TCTCCAAGGT TCTCATTTGT TCCAGTTCCT ATTTGCTTAG GTAGTTCTTG CTGTAGACTT CAGTTCAGTG CAAAATTCTT TTATGTTCTT GATTGGTTTT
CTGCTTCAAT CCATTTCAAG ATTCCTTGAT CTCATCTTTG TGATTTGAAG GAATTTCTCG CATTCAGAGA TCTGGATCTT GATTTCTCTA GGTTTCAACA GTGATCAAGA TCAAGGGGAG
TTCTAACAAT GGGTTTCCTT TTCAGAAAAA TCTTGATCAC GTTCTTCATT TTCTGGGAAG TCTTCTTGGA TTCTTTTTCT TTTTTCTGTT CTTTGATGGT GATTCTGTGT TTCCAATCAA
ATTTTCTTAT TTTCTTCTGT TTTCATTCGG TGTCCTCTCA AATCCAATCG ATCTTTCACT TTATTTCTCA TTTTTTTCTT CTGTTCTTCA TGTTCTTGAG CACTTGTCCT TGTGTTTGAT
AAGAAAAATC GAAGCTGGAA ATTTAAATTG ATTATCCGTA TTTCCTTGAA CATATCTTTG AACGAAGCAT TCCCAGGATC CTTCCTTGGA CGCCGATCTC GCCGACTACC TCAAGAAGCG
CTGCCCGCCT CCGGGGACGG AGGGCGACAC CGTGGATTTG GACGTGGCCA CGCCCAAAAT CTTGGACGTG CACTACTACA GAAATCTCAA GAAAGGGAAG GGCCTACTCA GCTCCGATCA
GACGCTCTGG GCCGGCTCCC TCACGGCCGA CATGGTGGCC TCCTTTTCGA AGAATCCCCA AGTCTGGTTT CACAAGTACG CCGGAGCGAT GGAGCGAATG GGTGCCATCG ATGTCCTCAC
CGGGAACGAG GGGGAGATCA GGGTCAAATG CTCTGTCGTC AACGGCCACT GA
|
Retrieve as FASTA
|
|
CDS►
Send to BLAST
|
| .........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGAGGAAGA AGGGGACAAG AGCAGCGGGC GAGGCAGCCA ATTTAGACTT GGACACCATG AACTTGAAGA GAGACGAAAT AAAAGACAGG CTATTGCTGA ATAACTATTA TTGGATGAAG
TGGCTCGGCG CAAATTCAAA GAAGAATCAG CATTCCCAGG ATCCTTCCTT GGACGCCGAT CTCGCCGACT ACCTCAAGAA GCGCTGCCCG CCTCCGGGGA CGGAGGGCGA CACCGTGGAT
TTGGACGTGG CCACGCCCAA AATCTTGGAC GTGCACTACT ACAGAAATCT CAAGAAAGGG AAGGGCCTAC TCAGCTCCGA TCAGACGCTC TGGGCCGGCT CCCTCACGGC CGACATGGTG
GCCTCCTTTT CGAAGAATCC CCAAGTCTGG TTTCACAAGT ACGCCGGAGC GATGGAGCGA ATGGGTGCCA TCGATGTCCT CACCGGGAAC GAGGGGGAGA TCAGGGTCAA ATGCTCTGTC
GTCAACGGCC ACTGA
|
Retrieve as FASTA
|
|
