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Entry information : SpolDiOx01 (Spipo0G0156500/Spipo0G0156600)
Entry ID 18925
Creation 2023-06-13 (Christophe Dunand)
Last sequence changes 2023-06-13 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Peroxidase information: SpolDiOx01 (Spipo0G0156500/Spipo0G0156600)
Name (synonym) SpolDiOx01 (Spipo0G0156500/Spipo0G0156600)
Class Alpha-dioxygenase     [Orthogroup: DiOx001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Araceae Spirodela
Organism Spirodela polyrhiza (great duckweed)    [TaxId: 29656 ]
Cellular localisation N/D
Tissue type
Inducer
Repressor
Best BLASTp hits
Perox score E-value SpolDiOx01
start..stop		 S start..stop
LminDiOx02 718 0 1..411 1..412
LminDiOx03 714 0 1..411 1..412
LminDiOx01 714 0 1..411 1..412
LminDiOx04 709 0 1..411 1..412
Literature and cross-references SpolDiOx01 (Spipo0G0156500/Spipo0G0156600)
Protein sequence: SpolDiOx01 (Spipo0G0156500/Spipo0G0156600)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   411
PWM (Da):   %s   45368.45  
PI (pH):   %s   8.28
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSLFSFLVHP SLRQEFNRMS FGYKILFLLV HGVDKLGLWH RLPVFLGLTY LFFRRTLHES YNLLAVGSID SATPDPAAHP FRSSDGTFTD LSKPDAGSQK TFFGRNIPPV DQQAKLKDPD  PFVVAMKLLE RKSFIGTGKQ FNVIAASWIQ FMLHDWIDHL EATGQIELTA PKEVAASCPL KAFRFFGTQN IPTGAATGIR AGHENIRTSW WDGSVLYGSD NGVSKSVRTF ENGKLKIGED  GLLLHDEQGR AVSGDVKNSW AGVSTLQALF VKEHNAVCDA LKKEHPEFDD EKLFQYGRLV TSAVIAKIHT IDWTVELLKT DTLNAAMHAN WYGLLGKRFK SIFGHVGGAT LGPALGGLVG 
LKEPNDHGVP YSLTEEFTSV YRMHPLLPDT LQVSNINAPP GPNKAPSVLK E* 

Retrieve as FASTA  
Remarks Partial sequence due to N in the DNA. Incorrect prediction from Phytozome (two ORFs)
CDS►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGTCCCTCT TCAGTTTCCT CGTCCACCCG AGCCTCCGGC AAGAGTTCAA CAGAATGAGC TTTGGCTACA AGATCCTCTT CCTGCTGGTG CATGGCGTCG ACAAGCTCGG GTTGTGGCAC  CGGCTCCCGG TGTTCCTCGG ACTCACCTAC CTCTTCTTTC GCCGGACCCT CCACGAGAGC TACAACCTCC TCGCCGTCGG CAGTATCGAC TCCGCTACTC CCGATCCCGC TGCCCACCCC  TTCCGCTCCA GTGACGGCAC CTTCACGGAC CTCTCCAAGC CCGACGCCGG AAGCCAGAAG ACATTTTTTG GGAGGAACAT CCCCCCTGTT GATCAGCAGG CCAAGCTTAA GGACCCGGAT  CCGTTTGTGG TGGCGATGAA GTTGCTGGAG AGGAAGAGCT TCATCGGGAC GGGGAAGCAG TTCAACGTGA TCGCCGCGTC CTGGATTCAG TTCATGCTTC ACGACTGGAT AGACCACCTA  GAGGCCACCG GCCAGATCGA GCTGACGGCA CCGAAAGAAG TCGCCGCCAG CTGCCCGCTG AAGGCCTTCC GGTTCTTCGG CACACAGAAT ATCCCCACGG GCGCGGCAAC GGGTATCCGA  GCCGGCCACG AGAACATCCG AACCTCCTGG TGGGACGGGA GCGTGCTGTA CGGGAGCGAC AACGGGGTTT CGAAGAGTGT GAGGACGTTT GAGAACGGGA AGCTGAAGAT CGGCGAGGAC  GGCCTCCTCC TCCACGACGA GCAGGGCCGC GCCGTCAGCG GCGACGTCAA GAATAGCTGG GCCGGCGTCT CGACCCTGCA AGCACTCTTC GTCAAGGAGC ACAACGCCGT CTGCGACGCC  CTCAAGAAGG AACACCCGGA GTTCGACGAC GAGAAGCTGT TCCAGTATGG GAGGCTGGTG ACGTCGGCGG TGATAGCCAA GATCCACACC ATCGACTGGA CCGTGGAGCT CCTAAAGACC  GACACCTTAA ATGCCGCAAT GCATGCCAAC TGGTATGGGC TCCTGGGGAA GAGATTCAAG AGCATCTTCG GGCACGTTGG AGGAGCCACG TTGGGGCCTG CTTTGGGTGG CCTCGTGGGG  CTCAAGGAGC CCAACGACCA TGGCGTCCCC TATTCCCTTA CCGAAGAGTT CACGAGTGTG TACAGGATGC ACCCTCTCCT TCCGGACACC CTCCAAGTCA GCAACATCAA TGCCCCCCCG 
GGGCCAAACA AGGCCCCCTC TGTACTCAAA GAGTAA 

Retrieve as FASTA