Entry information : NoffMSD01-1A(Nasoff79g0083390.t1)
Entry ID 18930
Creation 2023-10-30 (Christophe Dunand)
Last sequence changes 2023-11-08 (Christophe Dunand)
Sequence status N/D
Reviewer Not yet reviewed
Last annotation changes 2023-10-30 (Christophe Dunand)
Peroxidase information: NoffMSD01-1A(Nasoff79g0083390.t1)
Name NoffMSD01-1A(Nasoff79g0083390.t1)
Class Mn SOD     [Orthogroup: MSD001]*
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Eudicotyledons
Organism Nasturtium officinale    [TaxId: 65948 ]
Cellular localisation N/D
Tissue type
Inducer
Repressor
Best BLASTp hits
Perox score E-value NoffMSD01-1A
start..stop
S start..stop
NoffMSD01-1B 455 7.67e-166 1..231 1..231
AtMSD01 444 4.01e-161 1..229 1..229
TsMSD01-1A 442 1.12e-160 1..231 1..231
ThasMSD01 409 2.73e-147 1..230 1..232
Literature and cross-references NoffMSD01-1A(Nasoff79g0083390.t1)
Protein sequence: NoffMSD01-1A(Nasoff79g0083390.t1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   231
PWM (Da):   %s   25354.13  
PI (pH):   %s   9.09
Sequence
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Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAIRSATSRK TLSGLKQTSF RVLGFRGLQT FTLPDLPYDY GALEPAITGE IMQIHHQKHH QAYITNYNNA LELLDQAVNK GDASTVVKLQ SAIKFNGGGH VNHSIFWKNL APISEGGGEP 
PKGSLGSAID THFGSLEGLV KKMSAEGAAV QGSGWVWLGL DKELKKLVVD TTANQDPLVT KGGSLVPLVG IDVWEHAYYL QYKNVRPEYL KNVWKVINWK YASEVYEKEC K 

Retrieve as FASTA  
Remarks
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGATTC GTTCTGCGAC CAGTAGGAAA ACCCTATCCG GCTTGAAGCA GACGTCTTTT AGGGTATTGG GATTCCGAGG TCTTCAGACT TTTACGCTTC CTGATCTTCC TTACGATTAT  GGCGCATTGG AACCGGCGAT TACTGGAGAG ATCATGCAGA TTCACCACCA AAAGCATCAC CAGGCTTACA TCACTAATTA CAATAATGCT CTTGAGCTGC TTGATCAGGC TGTTAACAAG  GGAGATGCTT CCACTGTTGT TAAGTTGCAG AGTGCCATCA AGTTCAACGG CGGAGGTTTC TCTGACTTTT TTTTTTTTCA AGTTTCTATT TTTCGATCTC CATGTTTATT GACTTTCATC  TTGGATGGTG TGTTGTTTGT TGGATGAAAT TTAGCTTTAG TTGGAACCTA TTCTCTAATC GAATTTAGCA ATTCAAGTAT TTTTTTATTC AGTATGAATC TAATTCCTAT GATAGTTCTC  TCCGAGTCAA TTATAGTTTG AATCAGTGAC GCAAGCTGGG TTATAGACAA GTTTAGGTTG ATTGATGAAA TTCAGGAAAA AATATTGAAC TAAAGTTTTG GTTTTTATCT TTCTTCTTAA  TGTTTATCAC AGTAAAATAC GGGAAGAAAT GGATGGTGGT TTATGTCCTA GAGAATGAAA CTTATTTGGG TCTGTTTCTA TTGTGCAGGT CATGTCAACC ACTCAATTTT CTGGAAGAAC  CTTGCTCCTA TCAGTGTTAG TTTTTGTTTT GACTGTCTAT ATAATTCGTC CGTTCGATTG TTCTGTGGTT AATGGTGTTT TTTTTTTAAC ATATAACAGG AAGGTGGTGG AGAGCCACCA  AAAGGATCTC TTGGCAGCGC CATTGACACT CACTTTGGCT CCCTCGAAGG TTTAGTGAAA AAGATGAGTG CTGAAGGTGC TGCTGTGCAA GGCTCGGGAT GGGTGGTCAG TTGTCTAGTT  TCACCTTTTA ATATCCTTTA ATCACATTGT TGAATTTAGT GCTTTGCTTT ATAACCATGG TCATTGATTA GCGTTGTTTC GTTGATTGAT TCAGTGGCTC GGTTTAGACA AAGAATTGAA  GAAGCTTGTG GTTGATACAA CTGCCAATCA GGTAACTTAT CCATGATGAG GAATGTGATA TCGATTTGTT CAAGATAGAT ATTCATAAAT ATATGTGAGT TTTGATGAAT TTAAAGAAAA  AAAGCGTTTG TTTGGATGCA GGATCCATTA GTGACAAAAG GAGGAAGCTT GGTTCCTCTG GTGGGTATAG ATGTCTGGGA GCACGCTTAC TACTTGCAGG TAACAACGCT TTTGATCCCT  GTAGACTCAT GAGTTAGCTT ATAAGATTAA GGCTTAATCA CTCTTCTCTA TCTTGCAGTA CAAAAATGTG AGGCCGGAGT ATCTTAAGAA TGTATGGAAA GTGATCAACT GGAAATATGC 
GAGCGAAGTT TATGAGAAGG AATGCAAATG A 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCGATTC GTTCTGCGAC CAGTAGGAAA ACCCTATCCG GCTTGAAGCA GACGTCTTTT AGGGTATTGG GATTCCGAGG TCTTCAGACT TTTACGCTTC CTGATCTTCC TTACGATTAT  GGCGCATTGG AACCGGCGAT TACTGGAGAG ATCATGCAGA TTCACCACCA AAAGCATCAC CAGGCTTACA TCACTAATTA CAATAATGCT CTTGAGCTGC TTGATCAGGC TGTTAACAAG  GGAGATGCTT CCACTGTTGT TAAGTTGCAG AGTGCCATCA AGTTCAACGG CGGAGGTCAT GTCAACCACT CAATTTTCTG GAAGAACCTT GCTCCTATCA GTGAAGGTGG TGGAGAGCCA  CCAAAAGGAT CTCTTGGCAG CGCCATTGAC ACTCACTTTG GCTCCCTCGA AGGTTTAGTG AAAAAGATGA GTGCTGAAGG TGCTGCTGTG CAAGGCTCGG GATGGGTGTG GCTCGGTTTA  GACAAAGAAT TGAAGAAGCT TGTGGTTGAT ACAACTGCCA ATCAGGATCC ATTAGTGACA AAAGGAGGAA GCTTGGTTCC TCTGGTGGGT ATAGATGTCT GGGAGCACGC TTACTACTTG 
CAGTACAAAA ATGTGAGGCC GGAGTATCTT AAGAATGTAT GGAAAGTGAT CAACTGGAAA TATGCGAGCG AAGTTTATGA GAAGGAATGC AAATGA 

Retrieve as FASTA