Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
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214 |
PWM (Da) |
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23625.82 |
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PI (pH) |
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8.74 |
Update Perox 19111 Properties = '214;8.74;23625.82'
signalp /usr/local/bioinfo/src/SignalP/signalp-4.1/signalp -m ./assets/temp/tmp_mature ./assets/temp/tmp_pep 2>/dev/null
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MSSTCYCLYI NTSSTVQSPL LLNFPSSSSG LLPVLPEFSV SFSSRRHSSP WGLRSFQFPS KKLGSFEVRA SAAESEQPKW WEKTGGPNMV DIHSTQDFLG ALSQAGDRLV IVEFYGTWCA
SCRALFPKLC KTAEGHPDIL FLKVNFDDNK SLCKSLNVKV LPYFHFYRGA DGLLESFSCS LAKYQKIKDA IAKHKPSSCD AISRKEKTSD TSPR
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Retrieve as FASTA
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Remarks |
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DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTCATCAA CATGCTATTG CTTGTATATA AACACTTCCT CTACAGTCCA ATCACCTCTG TTGCTGAATT TTCCCTCCTC CTCCTCTGGC CTTCTACCGG TCCTTCCTGA ATTCAGCGTT
TCCTTTTCTT CCCGTCGCCA TTCTTCTCCC TGGGGTCTGA GAAGTTTTCA ATTTCCCTCC AAAAAGTTGG GTTCTTTCGA GGTATATTTG ATTCCTCTAT CTCCCCGACC TTCAATTCGA
ATTTGATGTT TCGCACTGCC TCTTTGCTAA CGAATATTTA TGCCGATCAC GGCGGATTGG CTTGAAGACT TTTCAAGAAC TAGTGCTATT TGTGTTTTAG AGATTGCTAA ATTAAGTTAG
TGAGATAGCT GCCAATGCAA GGATTTGAAC CCGAATTGTC TCTCACTCGA GGCTTTCAAA TTGTCTCATA GGATATCTGT ATAGCTACAC CTGATTTATA TATTCAATGA TCCGTTAGTT
GCACTTGGAG AATAATTGTT GATGAATTTC TTAGTGTTTC TGATAAAAGA TTGGGTTTTG GCTCACGTTT TAGGTACGAG CAAGTGCAGC CGAGAGTGAG CAGCCAAAAT GGTGGGAAAA
GACTGGAGGC CCGAATATGG TTGATATTCA CTCCACCCAA GATTTCTTGG GTGCTTTAAG TCAAGCTGGT GATAGGTTGG TTATTGTTGA ATTCTATGGT ACTTGGTGTG CCTCTTGTCG
GGCATTGTTC CCCAAGGTTA GTACTATATT TGTACATAGA TCACCTACTT GTTATTTGTT GAAAGATATT CAGACATCTG ACCTTAGTTC TATCAAGACA TGTGATGGTT AAATAGAAAT
TTGATGCTGG TTTAAGGAAA AAGATCCTTA TCCTACAGAA ATAATGTTGA TAATATAGGC ATTTAAAAAC TTCTTATATT AGCTTCTTAA CTGTTGGTTG GATGATTCTG AATACTTTCT
ACGTGCATGC AGCTTTGCAA GACCGCTGAA GGACATCCAG ATATATTATT TCTGAAAGTG AATTTTGATG ATAACAAATC CTTATGTAAA AGCCTGAATG TGAAAGTGCT TCCGTACTTT
CACTTCTATA GAGGAGCAGA TGGCCTACTG GAGTCCTTCT CATGCTCTCT GGCAAAGGTA GAAAAACACC TGTATACGGT TCAAGTTATT GAGTCTTTTG TTAGTCTAAC CAAAGATGAA
CAATTCATTA AATATTCACG AAAGAGAAAC CTTCTATGCA TGCATGGAAC CTAAAACATT GTGCTCCATG AAGAACCTAG GAAAGCTTAT GGAGCAGTTT TTTTACTCAT GAAGGAGGAT
GGTCCTTTAC TATATGATTA CGAAGATAAG CATTTATAGA CAAAAAGAGG AAATTTTGTT TAATTTTTGT TGCGTTTCAT AGAGGCGCCT TCTGTATACT CATTGTCTGT GTATATTCCT
GACAAAGTAA TCCTTTTTCG TGACACATTA TACTCTACTA TTGTGCAGTA TCAGAAGATA AAGGATGCTA TCGCCAAACA CAAGCCAAGC TCCTGTGATG CCATTTCCCG CAAGGAAAAG
ACATCTGACA CTTCTCCGAG ATAG
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGTCATCAA CATGCTATTG CTTGTATATA AACACTTCCT CTACAGTCCA ATCACCTCTG TTGCTGAATT TTCCCTCCTC CTCCTCTGGC CTTCTACCGG TCCTTCCTGA ATTCAGCGTT
TCCTTTTCTT CCCGTCGCCA TTCTTCTCCC TGGGGTCTGA GAAGTTTTCA ATTTCCCTCC AAAAAGTTGG GTTCTTTCGA GGTACGAGCA AGTGCAGCCG AGAGTGAGCA GCCAAAATGG
TGGGAAAAGA CTGGAGGCCC GAATATGGTT GATATTCACT CCACCCAAGA TTTCTTGGGT GCTTTAAGTC AAGCTGGTGA TAGGTTGGTT ATTGTTGAAT TCTATGGTAC TTGGTGTGCC
TCTTGTCGGG CATTGTTCCC CAAGCTTTGC AAGACCGCTG AAGGACATCC AGATATATTA TTTCTGAAAG TGAATTTTGA TGATAACAAA TCCTTATGTA AAAGCCTGAA TGTGAAAGTG
CTTCCGTACT TTCACTTCTA TAGAGGAGCA GATGGCCTAC TGGAGTCCTT CTCATGCTCT CTGGCAAAGT ATCAGAAGAT AAAGGATGCT ATCGCCAAAC ACAAGCCAAG CTCCTGTGAT
GCCATTTCCC GCAAGGAAAA GACATCTGAC ACTTCTCCGA GATAG
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Retrieve as FASTA
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