1. Browse the Database
  2. View Redoxidase
Entry information : GaPrx06
Entry ID 1996
Creation 2007-02-14 (Christophe Dunand)
Last sequence changes 2007-02-14 (Christophe Dunand)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2008-12-01 (Christophe Dunand)
Peroxidase information: GaPrx06
Name GaPrx06
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Malvaceae Gossypium
Organism Gossypium arboreum    [TaxId: 29729 ]
Cellular localisation N/D
Tissue type Boll fibers (cotton)
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GaPrx06
start..stop		 S start..stop
GhPrx27 665 0 1..326 1..326
CclPrx36 524 0 9..326 2..327
RcPrx41 522 0 29..326 23..320
MePrx33 522 0 11..326 4..319
Literature and cross-references GaPrx06
Literature Wing,R.A., Frisch,D., Yu,Y., Main,D., Rambo,T., Simmons,J., Henry ,D., Wood,T.C., Leslie,A. and Wilkins,T.A.
An integrated analysis of the genetics, development, and evolution of the cotton fiber
Unpublished (2000)
EST ref. GenBank:   BF278853 [5' end]  BG444931 [3' end]
Protein sequence: GaPrx06
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (298)
PWM (Da):   %s   35552.8 (32706.2)  
PI (pH):   %s   7.94 (7.99) Peptide Signal:   %s   cut: 31 range:29-326
Sequence
Send to BLAST
Send to Peroxiscan
*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAPSSPPQTP PSAVVIVLLL LFSTALLCES RLSLDYYSKT CPSFTKIMQD TITNKQITSP TTAAGTLRLF FHDCLPNGCD GSILISSTAF NKAERDADIN LSLPGDPFDL IVRAKTALEL  ACPNTVSCSD ILAVATRDLV TMLGGPYYNV YLGRKDSRVS SASSLEGKLP KPTMSMSQLI NLFSSSGFTV QEMVALSGAH TIGFSHCKEF SSNISNDTHY NPRFAQALKQ ACSGYPNNPT 
LSVFNDIMTP NKFDNLYYQN LPKGLGLLES DHGLYGDPRT KPFVELYASD QNKFFQDFAK AMQKLSVYGI KTGRRGEIRH RCDAVN 

Retrieve as FASTA  
Remarks Complete sequence from 16 ESTs.